Cow genome map

Conread name: Ss1.1-rpigca0_001822.5

Conread position: 1-247
Cow position: chr19:23614151-23614398 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 86

Conread position: 1-263
Cow position: chr19:20678250-20678513 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 26

Conread position: 2-248
Cow position: chr19:43570176-43569929 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 3-224
Cow position: chr19:43569923-43569703 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 190

Conread position: 3-239
Cow position: chr19:23614657-23614894 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 19, 169

Conread position: 3-248
Cow position: chr19:14940037-14940283 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 4-245
Cow position: chr19:14960341-14960101 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 83

Conread position: 4-245
Cow position: chr19:43570090-43569848 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 6, 79

Conread position: 5-252
Cow position: chr19:23613819-23614067 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 5, 82

Conread position: 5-264
Cow position: chr19:20678002-20678262 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 193

Conread position: 6-217
Cow position: chr19:23597502-23597713 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 151, 161

Conread position: 9-245
Cow position: chr19:14959679-14959445 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 28

Conread position: 9-245
Cow position: chr19:14960251-14960017 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 9-247
Cow position: chr19:23597421-23597659 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 9-248
Cow position: chr19:23613488-23613727 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 86, 78

Conread position: 10-239
Cow position: chr19:23613657-23613886 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 10-245
Cow position: chr19:23597338-23597573 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-248
Cow position: chr19:14916020-14916256 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 73

Conread position: 10-248
Cow position: chr19:14960084-14959846 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 143, 149

Conread position: 10-248
Cow position: chr19:23597170-23597408 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 10-248
Cow position: chr19:23614581-23614819 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 10-250
Cow position: chr19:14940381-14940621 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 10-250
Cow position: chr19:23597086-23597326 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 88

Conread position: 10-250
Cow position: chr19:23649863-23650103 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 10-250
Cow position: chr19:23650115-23650355 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 158
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-250
Cow position: chr19:23650199-23650439 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 10-250
Cow position: chr19:43569999-43569759 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 10-258
Cow position: chr19:23613741-23613989 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 10-263
Cow position: chr19:23649947-23650200 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 75

Conread position: 12-248
Cow position: chr19:43570249-43570013 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 14-245
Cow position: chr19:14960414-14960183 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 15-244
Cow position: chr19:14948321-14948092 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 79, 70

Conread position: 16-245
Cow position: chr19:14940219-14940448 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 80, 69

Conread position: 16-245
Cow position: chr19:23650037-23650266 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 16-249
Cow position: chr19:14959101-14958868 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 16-250
Cow position: chr19:23649785-23650019 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 69

Conread position: 17-241
Cow position: chr19:23614420-23614644 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 17-245
Cow position: chr19:14939968-14940196 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 15

Conread position: 17-245
Cow position: chr19:23597012-23597237 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 21

Conread position: 17-248
Cow position: chr19:20635401-20635170 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 149, 157

Conread position: 17-248
Cow position: chr19:23614084-23614315 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 17-248
Cow position: chr19:23614756-23614987 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 145, 157

Conread position: 17-251
Cow position: chr19:23597261-23597495 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 18-245
Cow position: chr19:23614337-23614564 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 148, 156

Conread position: 18-246
Cow position: chr19:14940305-14940533 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 18-248
Cow position: chr19:23614253-23614483 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 65

Conread position: 18-250
Cow position: chr19:14959177-14958951 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 18-250
Cow position: chr19:23614505-23614737 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 74, 57

Conread position: 18-250
Cow position: chr19:23649451-23649683 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 21-248
Cow position: chr19:14959989-14959764 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 77

Conread position: 21-248
Cow position: chr19:23613584-23613811 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 64

Conread position: 21-251
Cow position: chr19:14940560-14940790 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 21-263
Cow position: chr19:23613920-23614162 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 22-201
Cow position: chr19:14940897-14941076 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 22-214
Cow position: chr19:14959500-14959308 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 161, 144

Conread position: 22-245
Cow position: chr19:23649707-23649930 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 22-248
Cow position: chr19:14940477-14940703 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 63

Conread position: 22-248
Cow position: chr19:14948398-14948172 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 74, 63

Conread position: 22-248
Cow position: chr19:14959257-14959037 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 22-248
Cow position: chr19:23649623-23649849 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 22-250
Cow position: chr19:23649539-23649767 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 63

Conread position: 22-251
Cow position: chr19:14940813-14941042 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 165, 160

Conread position: 23-230
Cow position: chr19:20635227-20635020 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 164, 159

Conread position: 23-248
Cow position: chr19:14948480-14948256 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 76

Conread position: 23-250
Cow position: chr19:14940730-14940957 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 70, 61

Conread position: 24-245
Cow position: chr19:14959582-14959361 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 61

Conread position: 24-245
Cow position: chr19:20635646-20635425 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 24-245
Cow position: chr19:20678190-20678411 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 141

Conread position: 24-246
Cow position: chr19:20678442-20678664 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 62

Conread position: 24-248
Cow position: chr19:14940143-14940367 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 61

Conread position: 24-253
Cow position: chr19:20678106-20678335 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 72, 58

Conread position: 24-264
Cow position: chr19:20677518-20677758 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 62

Conread position: 25-246
Cow position: chr19:14940648-14940869 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-248
Cow position: chr19:20677687-20677910 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 162, 157

Conread position: 25-248
Cow position: chr19:20678359-20678582 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 84, 75

Conread position: 25-249
Cow position: chr19:20635477-20635253 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 56

Conread position: 25-253
Cow position: chr19:23614008-23614236 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 25-269
Cow position: chr19:20677771-20678015 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 30-249
Cow position: chr19:20635304-20635085 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 33-247
Cow position: chr19:20635553-20635339 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 63, 52

Conread position: 36-248
Cow position: chr19:23614859-23615071 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 36-249
Cow position: chr19:14915961-14916174 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 14

Conread position: 37-269
Cow position: chr19:23649302-23649534 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 39-245
Cow position: chr19:23613350-23613556 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 39-269
Cow position: chr19:23649388-23649618 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 55-248
Cow position: chr19:20677633-20677826 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 32

Conread position: 99-247
Cow position: chr19:14960413-14960265 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.