Cow genome map
| Conread name: | Ss1.1-rpigca0_001822.5 |
| Conread position: | 4-250 |
| Cow position: | chr2:82800078-82800325 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 10-251 |
| Cow position: | chr2:82799497-82799738 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-205 |
| Cow position: | chr2:82800260-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-239 |
| Cow position: | chr2:78756151-78756370 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 154 |
| Conread position: | 18-247 |
| Cow position: | chr2:78754895-78755124 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 18-247 |
| Cow position: | chr2:78755231-78755459 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 146, 102 |
| Conread position: | 18-247 |
| Cow position: | chr2:78755565-78755792 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 18-248 |
| Cow position: | chr2:78754979-78755209 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 18-248 |
| Cow position: | chr2:78755315-78755543 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 182, 22 |
| Conread position: | 18-264 |
| Cow position: | chr2:78755398-78755643 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 21-246 |
| Cow position: | chr2:78756071-78756296 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 43 |
| Conread position: | 21-248 |
| Cow position: | chr2:78755066-78755293 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 60 |
| Conread position: | 22-240 |
| Cow position: | chr2:82799761-82799979 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 22-251 |
| Cow position: | chr2:82800181-82800410 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 24-246 |
| Cow position: | chr2:78754817-78755039 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 72, 59 |
| Conread position: | 24-246 |
| Cow position: | chr2:86465419-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-245 |
| Cow position: | chr2:78755166-78755373 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 42-239 |
| Cow position: | chr2:82799447-82799642 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 102-248 |
| Cow position: | chr2:78754811-78754957 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.