Cow genome map


           Conread name:
           Ss1.1-rpigca0_001822.5
        

               Conread position:
               3-246
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               7, 85
               

               Conread position:
               4-245
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               4-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               5-245
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 174
               

               Conread position:
               5-248
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               6-245
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-250
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               90, 79
               

               Conread position:
               8-236
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-213
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 76
               

               Conread position:
               9-239
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               151, 165
               

               Conread position:
               9-245
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               9-245
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 76
               

               Conread position:
               9-246
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-247
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               159, 169
               

               Conread position:
               9-247
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-248
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               81, 75
               

               Conread position:
               9-248
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               181, 157
               

               Conread position:
               9-269
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 86
               

               Conread position:
               10-209
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-235
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               10-235
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-244
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-245
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 98
               

               Conread position:
               10-245
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               80, 75
               

               Conread position:
               10-245
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               149, 165
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               84, 74
               

               Conread position:
               10-250
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               5, 76
               

               Conread position:
               10-264
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-250
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-245
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-245
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               14-246
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-263
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-245
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               80, 70
               

               Conread position:
               15-245
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               15-245
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               136, 149
               

               Conread position:
               15-246
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               149, 158
               

               Conread position:
               15-248
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 159
               

               Conread position:
               15-248
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               15-248
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-251
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               16-245
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-249
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               17-246
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               17-247
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-250
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               79, 68
               

               Conread position:
               18-216
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-217
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               77, 68
               

               Conread position:
               18-217
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               164, 157
               

               Conread position:
               18-239
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-245
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               171, 158
               

               Conread position:
               18-264
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               18-266
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               84, 70
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-248
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               146, 156
               

               Conread position:
               21-248
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-248
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-248
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-248
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               21-250
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               21-251
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               21-251
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-239
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-239
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               22-240
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 63
               

               Conread position:
               22-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               159, 149
               

               Conread position:
               22-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               166, 159
               

               Conread position:
               22-247
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 89
               

               Conread position:
               22-248
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-251
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-251
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               23-246
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               23-246
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               73, 62
               

               Conread position:
               23-263
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               24-246
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               24-248
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-248
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               24-249
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               25-249
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               174, 141
               

               Conread position:
               26-251
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               28-247
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-245
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               36-246
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               93-248
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.