Cow genome map

Conread name: Ss1.1-rpigca0_001822.5

Conread position: 3-231
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 80

Conread position: 3-250
Cow position:
Alignm length: 250
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 72

Conread position: 7-247
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 109

Conread position: 7-257
Cow position:
Alignm length: 253
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 71

Conread position: 8-250
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 88, 77

Conread position: 9-217
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 76

Conread position: 9-217
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 9-245
Cow position:
Alignm length: 237
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 9-246
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 29

Conread position: 9-246
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 9-248
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 9-251
Cow position:
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 94, 74

Conread position: 10-213
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-239
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 84, 76

Conread position: 10-245
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 75

Conread position: 10-245
Cow position:
Alignm length: 236
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 10-246
Cow position:
Alignm length: 239
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 81

Conread position: 10-248
Cow position:
Alignm length: 239
Alignm identity: 160
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 10-248
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-248
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 84, 74

Conread position: 10-248
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 75

Conread position: 10-250
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 10-251
Cow position:
Alignm length: 242
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 16-245
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 16-248
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 171, 160

Conread position: 17-201
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 170, 165

Conread position: 17-212
Cow position:
Alignm length: 196
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-245
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 17-247
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 17-248
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 17-250
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 79, 67

Conread position: 17-257
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 89

Conread position: 18-245
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 146

Conread position: 18-245
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 78, 66

Conread position: 18-245
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 65

Conread position: 18-246
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 140, 148

Conread position: 21-247
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 21-248
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 21-251
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 75, 65

Conread position: 22-245
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 70, 64

Conread position: 22-248
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 22-248
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 74, 63

Conread position: 24-250
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 80, 74

Conread position: 24-300
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 215, 0

Conread position: 25-248
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 59

Conread position: 25-248
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 59

Conread position: 28-248
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 29-250
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 33-248
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 60, 52

Conread position: 33-251
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 61, 52

Conread position: 39-248
Cow position:
Alignm length: 210
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 41-248
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 55-248
Cow position:
Alignm length: 196
Alignm identity: 133
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 18

Show alignments to all cow chromosomes.