Cow genome map


           Conread name:
           Ss1.1-rpigca0_001822.5
        

               Conread position:
               2-250
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 83
               

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               4-212
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               4-245
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-250
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 161
               

               Conread position:
               5-245
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 95
               

               Conread position:
               5-250
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               5-251
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 213
               

               Conread position:
               9-191
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               9-242
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 68
               

               Conread position:
               9-250
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-250
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-269
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               162, 168
               

               Conread position:
               10-249
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               93, 89
               

               Conread position:
               10-250
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               10-250
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               84, 75
               

               Conread position:
               10-250
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-250
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               174, 157
               

               Conread position:
               10-251
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               82, 76
               

               Conread position:
               14-236
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               74, 69
               

               Conread position:
               14-245
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               150, 63
               

               Conread position:
               14-248
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               210, 132
               

               Conread position:
               15-229
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               15-248
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               138, 149
               

               Conread position:
               15-249
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-251
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-244
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-251
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-239
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               214, 150
               

               Conread position:
               17-248
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               17-250
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               17-264
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-239
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               18-245
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               78, 67
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-250
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-250
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-269
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-251
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-263
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               22-239
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               22-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               146, 156
               

               Conread position:
               22-245
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-245
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               22-248
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-248
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-250
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-270
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               225, 236
               

               Conread position:
               23-252
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               24-239
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               24-250
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               148, 154
               

               Conread position:
               26-245
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-245
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 55
               

               Conread position:
               37-248
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               37-249
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               39-245
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               40-245
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               40-250
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 79
               

               Conread position:
               43-251
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               57-245
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-250
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 76
               
Show alignments to all cow chromosomes.