Cow genome map
| Conread name: | Ss1.1-rpigca0_001822.5 |
| Conread position: | 4-248 |
| Cow position: | chr6:49340453-49340696 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-248 |
| Cow position: | chr6:49396345-49396585 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 77 |
| Conread position: | 10-245 |
| Cow position: | chr6:49341130-49341365 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 10-248 |
| Cow position: | chr6:49340626-49340864 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-249 |
| Cow position: | chr6:49341046-49341285 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 10-250 |
| Cow position: | chr6:49340374-49340614 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 10-250 |
| Cow position: | chr6:49340542-49340782 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 162, 177 |
| Conread position: | 10-269 |
| Cow position: | chr6:49340962-49341225 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 10-280 |
| Cow position: | chr6:49341214-49341486 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 18-249 |
| Cow position: | chr6:49340718-49340949 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-248 |
| Cow position: | chr6:49396274-49396501 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 21-251 |
| Cow position: | chr6:49340805-49341035 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-250 |
| Cow position: | chr6:49340890-49341118 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 60 |
Show alignments to all cow chromosomes.