Cow genome map


           Conread name:
           Ss1.1-rpigca0_001822.5
        

               Conread position:
               4-231
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               4-245
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               4-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               4-250
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               88, 7
               

               Conread position:
               4-251
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               5-253
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               8-248
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               88, 76
               

               Conread position:
               9-248
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               159, 168
               

               Conread position:
               9-251
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               9-297
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               161, 169
               

               Conread position:
               10-205
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 72
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               148, 170
               

               Conread position:
               10-248
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               149, 162
               

               Conread position:
               12-251
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               12, 171
               

               Conread position:
               15-247
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-239
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-245
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 64
               

               Conread position:
               17-248
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               77, 69
               

               Conread position:
               17-250
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-251
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               18-239
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-245
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-246
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               150, 156
               

               Conread position:
               18-247
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-248
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-250
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-250
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-263
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-270
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               74, 56
               

               Conread position:
               21-239
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-245
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 64
               

               Conread position:
               21-250
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 63
               

               Conread position:
               21-251
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               75, 60
               

               Conread position:
               22-245
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-247
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-250
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               146, 157
               

               Conread position:
               24-248
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-247
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               36-247
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               42-248
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               50, 39
               
Show alignments to all cow chromosomes.