Cow genome map

Conread name: Ss1.1-rpigca0_007986.5

Conread position: 1-441
Cow position:
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 154

Conread position: 1-513
Cow position:
Alignm length: 521
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 69

Conread position: 1-513
Cow position:
Alignm length: 523
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 69

Conread position: 1-514
Cow position:
Alignm length: 526
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 69

Conread position: 1-514
Cow position:
Alignm length: 528
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 64

Conread position: 1-515
Cow position:
Alignm length: 529
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 62

Conread position: 1-515
Cow position:
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 69

Conread position: 1-515
Cow position:
Alignm length: 524
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 69

Conread position: 1-515
Cow position:
Alignm length: 527
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-515
Cow position:
Alignm length: 527
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 62

Conread position: 1-515
Cow position:
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 69

Conread position: 1-515
Cow position:
Alignm length: 527
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 75

Conread position: 2-491
Cow position:
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 91

Conread position: 3-281
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 3-486
Cow position:
Alignm length: 494
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 67

Conread position: 3-486
Cow position:
Alignm length: 491
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 69

Conread position: 3-486
Cow position:
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 67

Conread position: 3-493
Cow position:
Alignm length: 503
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 40

Conread position: 3-500
Cow position:
Alignm length: 504
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 69

Conread position: 3-500
Cow position:
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 67

Conread position: 3-506
Cow position:
Alignm length: 513
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 36

Conread position: 3-513
Cow position:
Alignm length: 524
Alignm identity: 331
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 144

Conread position: 3-515
Cow position:
Alignm length: 524
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 57

Conread position: 3-515
Cow position:
Alignm length: 514
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 502, 67

Conread position: 3-515
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 67

Conread position: 3-515
Cow position:
Alignm length: 522
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 67

Conread position: 3-515
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 67

Conread position: 4-487
Cow position:
Alignm length: 504
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 35

Conread position: 4-515
Cow position:
Alignm length: 527
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 66

Conread position: 5-327
Cow position:
Alignm length: 323
Alignm identity: 216
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 5-477
Cow position:
Alignm length: 482
Alignm identity: 305
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 130, 17

Conread position: 5-515
Cow position:
Alignm length: 522
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 71

Conread position: 11-502
Cow position:
Alignm length: 511
Alignm identity: 322
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 104, 65

Conread position: 48-515
Cow position:
Alignm length: 483
Alignm identity: 307
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 307, 37

Conread position: 72-466
Cow position:
Alignm length: 401
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 80

Conread position: 89-465
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 69

Conread position: 93-470
Cow position:
Alignm length: 384
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 279, 70

Conread position: 114-282
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 115-514
Cow position:
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 43

Conread position: 179-359
Cow position:
Alignm length: 184
Alignm identity: 146
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 99, 19

Conread position: 179-465
Cow position:
Alignm length: 289
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 121, 31

Conread position: 179-506
Cow position:
Alignm length: 336
Alignm identity: 220
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 34

Conread position: 204-515
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 12

Conread position: 215-509
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 91, 58

Conread position: 215-516
Cow position:
Alignm length: 303
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 133

Conread position: 264-427
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 107, 6

Conread position: 264-487
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 47

Show alignments to all cow chromosomes.