Cow genome map

Conread name: Ss1.1-rpigca0_007986.5

Conread position: 1-193
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 169, 61

Conread position: 1-243
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 31

Conread position: 1-290
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 71

Conread position: 1-346
Cow position:
Alignm length: 361
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 166, 62

Conread position: 1-367
Cow position:
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 69

Conread position: 1-386
Cow position:
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 69

Conread position: 1-478
Cow position:
Alignm length: 491
Alignm identity: 322
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 190, 75

Conread position: 1-503
Cow position:
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 69

Conread position: 1-505
Cow position:
Alignm length: 513
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 69

Conread position: 1-506
Cow position:
Alignm length: 515
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 60

Conread position: 1-506
Cow position:
Alignm length: 511
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 20

Conread position: 1-507
Cow position:
Alignm length: 517
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-513
Cow position:
Alignm length: 522
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 1-513
Cow position:
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 69

Conread position: 1-513
Cow position:
Alignm length: 523
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 69

Conread position: 1-515
Cow position:
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 69

Conread position: 1-515
Cow position:
Alignm length: 519
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 20

Conread position: 1-515
Cow position:
Alignm length: 522
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 69

Conread position: 1-515
Cow position:
Alignm length: 527
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 69

Conread position: 1-516
Cow position:
Alignm length: 528
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 71

Conread position: 2-459
Cow position:
Alignm length: 468
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 68

Conread position: 2-515
Cow position:
Alignm length: 524
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 2-515
Cow position:
Alignm length: 526
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 74

Conread position: 2-515
Cow position:
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 68

Conread position: 3-245
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 131

Conread position: 3-282
Cow position:
Alignm length: 281
Alignm identity: 199
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 219, 67

Conread position: 3-308
Cow position:
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 67

Conread position: 3-371
Cow position:
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 48

Conread position: 3-438
Cow position:
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 67

Conread position: 3-472
Cow position:
Alignm length: 478
Alignm identity: 294
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 115, 56

Conread position: 3-487
Cow position:
Alignm length: 512
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 75

Conread position: 3-487
Cow position:
Alignm length: 496
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 70

Conread position: 3-487
Cow position:
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 69

Conread position: 3-506
Cow position:
Alignm length: 514
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 67

Conread position: 3-515
Cow position:
Alignm length: 522
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 45

Conread position: 3-515
Cow position:
Alignm length: 518
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 67

Conread position: 3-515
Cow position:
Alignm length: 526
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 58

Conread position: 3-515
Cow position:
Alignm length: 529
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 45

Conread position: 3-515
Cow position:
Alignm length: 533
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 67

Conread position: 4-486
Cow position:
Alignm length: 496
Alignm identity: 303
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 115, 44

Conread position: 5-281
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 5-515
Cow position:
Alignm length: 522
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 65

Conread position: 7-499
Cow position:
Alignm length: 506
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 63

Conread position: 7-515
Cow position:
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 33

Conread position: 11-335
Cow position:
Alignm length: 328
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 267, 0

Conread position: 43-515
Cow position:
Alignm length: 485
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 27

Conread position: 45-500
Cow position:
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 42

Conread position: 47-513
Cow position:
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 23

Conread position: 67-515
Cow position:
Alignm length: 460
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 20

Conread position: 77-349
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 89

Conread position: 77-486
Cow position:
Alignm length: 419
Alignm identity: 259
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 52

Conread position: 81-486
Cow position:
Alignm length: 414
Alignm identity: 282
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 225, 13

Conread position: 95-422
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 63

Conread position: 96-371
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 43

Conread position: 100-506
Cow position:
Alignm length: 409
Alignm identity: 279
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 49, 14

Conread position: 132-500
Cow position:
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 26

Conread position: 156-467
Cow position:
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 75

Conread position: 172-513
Cow position:
Alignm length: 360
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 184

Conread position: 179-363
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 179-407
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 83, 113

Conread position: 181-481
Cow position:
Alignm length: 308
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 92

Conread position: 196-515
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 101

Conread position: 196-515
Cow position:
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 207-506
Cow position:
Alignm length: 302
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 39

Conread position: 273-513
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 274-515
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 214, 0

Conread position: 324-515
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 345-500
Cow position:
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 360-515
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 0

Show alignments to all cow chromosomes.