Cow genome map

Conread name: Ss1.1-rpigca0_007986.5

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 89, 72

Conread position: 1-293
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 69

Conread position: 1-299
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 69

Conread position: 1-465
Cow position:
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 60

Conread position: 1-489
Cow position:
Alignm length: 490
Alignm identity: 319
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 84

Conread position: 1-506
Cow position:
Alignm length: 525
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 165

Conread position: 1-513
Cow position:
Alignm length: 525
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 69

Conread position: 1-514
Cow position:
Alignm length: 521
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 75

Conread position: 1-515
Cow position:
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-515
Cow position:
Alignm length: 533
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-515
Cow position:
Alignm length: 533
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 57

Conread position: 1-515
Cow position:
Alignm length: 518
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 69

Conread position: 1-515
Cow position:
Alignm length: 525
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 61

Conread position: 1-515
Cow position:
Alignm length: 518
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 48

Conread position: 1-515
Cow position:
Alignm length: 528
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 73

Conread position: 1-515
Cow position:
Alignm length: 526
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 123

Conread position: 1-515
Cow position:
Alignm length: 542
Alignm identity: 359
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 73, 53

Conread position: 1-516
Cow position:
Alignm length: 525
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 75

Conread position: 2-505
Cow position:
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 63

Conread position: 2-513
Cow position:
Alignm length: 512
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 2-513
Cow position:
Alignm length: 528
Alignm identity: 336
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 321, 68

Conread position: 2-515
Cow position:
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 20

Conread position: 2-515
Cow position:
Alignm length: 517
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 68

Conread position: 3-207
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 146, 36

Conread position: 3-279
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 203, 58

Conread position: 3-281
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 67

Conread position: 3-354
Cow position:
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 3-371
Cow position:
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 11

Conread position: 3-371
Cow position:
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 67

Conread position: 3-468
Cow position:
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 67

Conread position: 3-470
Cow position:
Alignm length: 473
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 67

Conread position: 3-478
Cow position:
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 67

Conread position: 3-479
Cow position:
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 3-479
Cow position:
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 3-479
Cow position:
Alignm length: 495
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 50

Conread position: 3-486
Cow position:
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 69

Conread position: 3-487
Cow position:
Alignm length: 495
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 73

Conread position: 3-490
Cow position:
Alignm length: 496
Alignm identity: 318
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 269, 56

Conread position: 3-515
Cow position:
Alignm length: 528
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 67

Conread position: 3-515
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 69

Conread position: 3-515
Cow position:
Alignm length: 524
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 69

Conread position: 3-515
Cow position:
Alignm length: 523
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 67

Conread position: 3-515
Cow position:
Alignm length: 535
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 90

Conread position: 3-515
Cow position:
Alignm length: 525
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 67

Conread position: 3-515
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 69

Conread position: 3-516
Cow position:
Alignm length: 535
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 163

Conread position: 5-370
Cow position:
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 69, 10

Conread position: 5-506
Cow position:
Alignm length: 514
Alignm identity: 328
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 164, 65

Conread position: 6-456
Cow position:
Alignm length: 464
Alignm identity: 301
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 244, 56

Conread position: 6-487
Cow position:
Alignm length: 492
Alignm identity: 306
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 240, 31

Conread position: 6-514
Cow position:
Alignm length: 517
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 33

Conread position: 9-486
Cow position:
Alignm length: 491
Alignm identity: 305
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 85

Conread position: 10-370
Cow position:
Alignm length: 371
Alignm identity: 235
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 109

Conread position: 18-233
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 24-463
Cow position:
Alignm length: 448
Alignm identity: 290
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 41, 90

Conread position: 34-515
Cow position:
Alignm length: 494
Alignm identity: 326
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 97, 42

Conread position: 42-516
Cow position:
Alignm length: 486
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 28

Conread position: 48-515
Cow position:
Alignm length: 474
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 28

Conread position: 52-333
Cow position:
Alignm length: 285
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 234

Conread position: 58-314
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 12

Conread position: 84-502
Cow position:
Alignm length: 432
Alignm identity: 274
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 186, 40

Conread position: 86-507
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 29

Conread position: 112-516
Cow position:
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 46

Conread position: 161-505
Cow position:
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 337

Conread position: 179-506
Cow position:
Alignm length: 334
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 118

Conread position: 183-515
Cow position:
Alignm length: 344
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 19

Conread position: 196-513
Cow position:
Alignm length: 330
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 84, 7

Conread position: 200-515
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 66

Conread position: 226-504
Cow position:
Alignm length: 289
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 42

Conread position: 228-492
Cow position:
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 45

Conread position: 232-515
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 232-515
Cow position:
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 277

Conread position: 242-515
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 174, 0

Conread position: 287-515
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 307-500
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 27

Conread position: 313-513
Cow position:
Alignm length: 209
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 188

Show alignments to all cow chromosomes.