Cow genome map

Conread name: Ss1.1-rpigca0_007986.5

Conread position: 1-218
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 199, 69

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 1-510
Cow position:
Alignm length: 521
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-514
Cow position:
Alignm length: 526
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 19

Conread position: 1-515
Cow position:
Alignm length: 518
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-515
Cow position:
Alignm length: 523
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 69

Conread position: 1-515
Cow position:
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 75

Conread position: 1-515
Cow position:
Alignm length: 527
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 69

Conread position: 1-515
Cow position:
Alignm length: 527
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 38

Conread position: 1-515
Cow position:
Alignm length: 523
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 38

Conread position: 2-205
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 161, 47

Conread position: 2-485
Cow position:
Alignm length: 485
Alignm identity: 310
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 352, 75

Conread position: 2-515
Cow position:
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 26

Conread position: 3-372
Cow position:
Alignm length: 381
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 163

Conread position: 3-453
Cow position:
Alignm length: 461
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 69

Conread position: 3-486
Cow position:
Alignm length: 496
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 68

Conread position: 3-486
Cow position:
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 73

Conread position: 3-487
Cow position:
Alignm length: 493
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 48

Conread position: 3-500
Cow position:
Alignm length: 506
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 36

Conread position: 3-500
Cow position:
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 67

Conread position: 3-513
Cow position:
Alignm length: 522
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 36

Conread position: 3-515
Cow position:
Alignm length: 521
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 35

Conread position: 3-515
Cow position:
Alignm length: 522
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 26

Conread position: 4-515
Cow position:
Alignm length: 531
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 77

Conread position: 5-470
Cow position:
Alignm length: 498
Alignm identity: 322
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 46, 73

Conread position: 5-479
Cow position:
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 65

Conread position: 5-515
Cow position:
Alignm length: 523
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 86

Conread position: 5-515
Cow position:
Alignm length: 526
Alignm identity: 334
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 154

Conread position: 7-458
Cow position:
Alignm length: 467
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 7-486
Cow position:
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 63

Conread position: 7-506
Cow position:
Alignm length: 509
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 47

Conread position: 15-470
Cow position:
Alignm length: 463
Alignm identity: 304
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 71

Conread position: 18-297
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 55

Conread position: 35-487
Cow position:
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 36

Conread position: 44-515
Cow position:
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 26

Conread position: 53-515
Cow position:
Alignm length: 475
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 105

Conread position: 78-515
Cow position:
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 74

Conread position: 99-508
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 59

Conread position: 157-515
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 75

Conread position: 179-515
Cow position:
Alignm length: 343
Alignm identity: 237
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 179

Conread position: 180-504
Cow position:
Alignm length: 335
Alignm identity: 219
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 182, 35

Conread position: 181-470
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 32, 17

Conread position: 250-456
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 121, 0

Conread position: 298-515
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 74, 105

Show alignments to all cow chromosomes.