Cow genome map


           Conread name:
           Ss1.1-rpigca0_007986.5
        

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-515
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 69
               

               Conread position:
               1-515
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 69
               

               Conread position:
               1-515
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 69
               

               Conread position:
               2-372
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               132, 20
               

               Conread position:
               2-515
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 68
               

               Conread position:
               3-422
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 50
               

               Conread position:
               3-468
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               3-479
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 67
               

               Conread position:
               3-486
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               366, 67
               

               Conread position:
               3-487
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 19
               

               Conread position:
               3-515
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 67
               

               Conread position:
               3-515
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 67
               

               Conread position:
               3-515
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 67
               

               Conread position:
               3-515
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 67
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 66
               

               Conread position:
               5-486
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               139, 71
               

               Conread position:
               5-487
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 55
               

               Conread position:
               5-500
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 65
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 19
               

               Conread position:
               29-477
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               260, 22
               

               Conread position:
               35-246
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               98, 35
               

               Conread position:
               42-471
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               46-281
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               105, 8
               

               Conread position:
               53-486
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               55-271
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               65-506
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 88
               

               Conread position:
               72-407
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               202, 12
               

               Conread position:
               72-480
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 85
               

               Conread position:
               80-515
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               103-487
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 23
               

               Conread position:
               135-515
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               158-515
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               6, 168
               

               Conread position:
               158-515
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               6, 168
               

               Conread position:
               164-304
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               188-515
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               118, 47
               

               Conread position:
               242-515
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               262-515
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               110, 11
               

               Conread position:
               273-512
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               186, 23
               

               Conread position:
               273-515
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 235
               

               Conread position:
               310-492
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               311-514
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               50, 183
               

               Conread position:
               324-515
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.