Cow genome map
| Conread name: | Ss1.1-rpigca0_007986.5 |
| Conread position: | 1-192 |
| Cow position: | chr27:27753136-27753324 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-487 |
| Cow position: | chr27:25160753-25160270 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 299 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 1-513 |
| Cow position: | chr27:5910923-5910407 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 69 |
| Conread position: | 1-513 |
| Cow position: | chr27:23335222-23334704 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 69 |
| Conread position: | 1-515 |
| Cow position: | chr27:893267-892753 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 69 |
| Conread position: | 1-515 |
| Cow position: | chr27:1209412-1208895 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 69 |
| Conread position: | 1-515 |
| Cow position: | chr27:9993145-9993653 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 487, 69 |
| Conread position: | 1-515 |
| Cow position: | chr27:14460396-14460918 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 69 |
| Conread position: | 1-515 |
| Cow position: | chr27:26324875-26324352 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 69 |
| Conread position: | 1-515 |
| Cow position: | chr27:27662960-27662432 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 69 |
| Conread position: | 3-193 |
| Cow position: | chr27:16432478-16432296 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-370 |
| Cow position: | chr27:26227351-26226992 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 8 |
| Conread position: | 3-466 |
| Cow position: | chr27:15278011-15278476 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 49 |
| Conread position: | 3-467 |
| Cow position: | chr27:16439383-16438922 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 67 |
| Conread position: | 3-469 |
| Cow position: | chr27:25002478-25002948 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 68 |
| Conread position: | 3-500 |
| Cow position: | chr27:27051735-27051218 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 65 |
| Conread position: | 3-513 |
| Cow position: | chr27:28890783-28890274 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 318 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 3-515 |
| Cow position: | chr27:2364808-2364293 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 67 |
| Conread position: | 3-515 |
| Cow position: | chr27:15541387-15540869 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 67 |
| Conread position: | 3-515 |
| Cow position: | chr27:16034336-16034854 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 49 |
| Conread position: | 7-509 |
| Cow position: | chr27:25804829-25805333 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 69 |
| Conread position: | 12-515 |
| Cow position: | chr27:25999018-25999508 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 15-454 |
| Cow position: | chr27:3996329-3996767 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 15-506 |
| Cow position: | chr27:5907076-5906585 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 156-513 |
| Cow position: | chr27:13898100-13897735 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 42 |
| Conread position: | 182-515 |
| Cow position: | chr27:25117126-25116795 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 58 |
| Conread position: | 183-515 |
| Cow position: | chr27:26556101-26556436 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 12 |
| Conread position: | 292-486 |
| Cow position: | chr27:16432242-16432040 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 321-514 |
| Cow position: | chr27:11471652-11471853 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 345-513 |
| Cow position: | chr27:23930436-23930604 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 154, 12 |
Show alignments to all cow chromosomes.