Cow genome map
| Conread name: | Ss1.1-rpigca0_007986.5 |
| Conread position: | 1-154 |
| Cow position: | chr3:23214074-23214225 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-162 |
| Cow position: | chr3:52864485-52864645 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 1-233 |
| Cow position: | chr3:66620162-66619938 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-253 |
| Cow position: | chr3:53515601-53515359 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-276 |
| Cow position: | chr3:29595185-29594920 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 1-279 |
| Cow position: | chr3:5995709-5995981 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-354 |
| Cow position: | chr3:18463599-18463940 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-355 |
| Cow position: | chr3:4027259-4026910 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 69 |
| Conread position: | 1-355 |
| Cow position: | chr3:14754309-14754649 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 48, 70 |
| Conread position: | 1-367 |
| Cow position: | chr3:18729153-18729510 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 244, 33 |
| Conread position: | 1-370 |
| Cow position: | chr3:58947446-58947077 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 151 |
| Conread position: | 1-371 |
| Cow position: | chr3:51940432-51940787 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 1-376 |
| Cow position: | chr3:42631003-42630626 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 76 |
| Conread position: | 1-396 |
| Cow position: | chr3:66990774-66990389 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 20 |
| Conread position: | 1-433 |
| Cow position: | chr3:26949502-26949066 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 95 |
| Conread position: | 1-454 |
| Cow position: | chr3:54864711-54865152 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 69 |
| Conread position: | 1-466 |
| Cow position: | chr3:19756971-19757443 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 69 |
| Conread position: | 1-470 |
| Cow position: | chr3:19944045-19943592 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 77 |
| Conread position: | 1-486 |
| Cow position: | chr3:6685449-6684949 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 1-487 |
| Cow position: | chr3:40823375-40822884 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 1-487 |
| Cow position: | chr3:55229714-55230207 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 57 |
| Conread position: | 1-503 |
| Cow position: | chr3:17936076-17936583 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 263, 75 |
| Conread position: | 1-506 |
| Cow position: | chr3:18356899-18357395 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 76 |
| Conread position: | 1-506 |
| Cow position: | chr3:36127379-36126881 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 1-513 |
| Cow position: | chr3:14634124-14634606 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:594563-594062 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:2710973-2711492 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:3980378-3979863 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 1-515 |
| Cow position: | chr3:5954198-5954702 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:10239637-10239118 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:18542420-18542944 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:18811491-18810970 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 60 |
| Conread position: | 1-515 |
| Cow position: | chr3:21182696-21183212 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:23291418-23291938 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:30314554-30314026 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:34030910-34031431 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:36881934-36882446 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 75 |
| Conread position: | 1-515 |
| Cow position: | chr3:42432219-42431705 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:43039717-43040224 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:50127892-50128398 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:63005158-63005672 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 158 |
| Conread position: | 1-515 |
| Cow position: | chr3:64017376-64017896 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 75 |
| Conread position: | 1-515 |
| Cow position: | chr3:69933382-69932867 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:72630057-72629538 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 69 |
| Conread position: | 1-515 |
| Cow position: | chr3:78027422-78027945 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 69 |
| Conread position: | 1-516 |
| Cow position: | chr3:32842446-32842954 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 42 |
| Conread position: | 2-228 |
| Cow position: | chr3:19802646-19802424 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 2-366 |
| Cow position: | chr3:80871882-80871531 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 74 |
| Conread position: | 2-513 |
| Cow position: | chr3:56340440-56340952 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 68 |
| Conread position: | 2-515 |
| Cow position: | chr3:24591653-24592144 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 2-515 |
| Cow position: | chr3:38866382-38865874 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 37 |
| Conread position: | 2-515 |
| Cow position: | chr3:75041181-75041679 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 37 |
| Conread position: | 3-143 |
| Cow position: | chr3:6189201-6189056 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-266 |
| Cow position: | chr3:18859404-18859149 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-280 |
| Cow position: | chr3:7168780-7168508 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-333 |
| Cow position: | chr3:66638726-66638396 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 67 |
| Conread position: | 3-371 |
| Cow position: | chr3:7158746-7159124 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 73 |
| Conread position: | 3-414 |
| Cow position: | chr3:50915290-50914879 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 74 |
| Conread position: | 3-450 |
| Cow position: | chr3:56321302-56320845 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 68 |
| Conread position: | 3-461 |
| Cow position: | chr3:47179216-47179682 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 67 |
| Conread position: | 3-465 |
| Cow position: | chr3:2633911-2633445 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 69 |
| Conread position: | 3-468 |
| Cow position: | chr3:36117662-36117181 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 67 |
| Conread position: | 3-468 |
| Cow position: | chr3:64650611-64650147 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 67 |
| Conread position: | 3-475 |
| Cow position: | chr3:5047198-5047676 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 73 |
| Conread position: | 3-478 |
| Cow position: | chr3:41211751-41212233 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 73 |
| Conread position: | 3-478 |
| Cow position: | chr3:45869231-45869678 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 67 |
| Conread position: | 3-486 |
| Cow position: | chr3:45032727-45032238 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 67 |
| Conread position: | 3-486 |
| Cow position: | chr3:47081672-47082149 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 67 |
| Conread position: | 3-487 |
| Cow position: | chr3:207175-207664 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 3-487 |
| Cow position: | chr3:2654092-2653617 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-487 |
| Cow position: | chr3:5829642-5830127 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 67 |
| Conread position: | 3-500 |
| Cow position: | chr3:9716800-9716293 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 73 |
| Conread position: | 3-500 |
| Cow position: | chr3:31897991-31898487 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 58 |
| Conread position: | 3-500 |
| Cow position: | chr3:42579981-42580483 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 67 |
| Conread position: | 3-500 |
| Cow position: | chr3:77474746-77474246 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 67 |
| Conread position: | 3-502 |
| Cow position: | chr3:66119641-66119137 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 67 |
| Conread position: | 3-506 |
| Cow position: | chr3:37969065-37968562 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 67 |
| Conread position: | 3-506 |
| Cow position: | chr3:46677928-46678435 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 67 |
| Conread position: | 3-506 |
| Cow position: | chr3:46861317-46861821 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 67 |
| Conread position: | 3-507 |
| Cow position: | chr3:3806325-3805855 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-509 |
| Cow position: | chr3:31354279-31354779 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 67 |
| Conread position: | 3-514 |
| Cow position: | chr3:48231017-48231501 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-515 |
| Cow position: | chr3:2917447-2916935 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:3054584-3054088 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 49 |
| Conread position: | 3-515 |
| Cow position: | chr3:3523007-3522480 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:4285872-4285354 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:6782370-6781856 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 58 |
| Conread position: | 3-515 |
| Cow position: | chr3:15989049-15989559 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:17828663-17829181 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:19878644-19878130 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 58 |
| Conread position: | 3-515 |
| Cow position: | chr3:22335879-22335365 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:24314454-24313944 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 36 |
| Conread position: | 3-515 |
| Cow position: | chr3:32146104-32146617 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:36098719-36099242 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:48060846-48061356 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 36 |
| Conread position: | 3-515 |
| Cow position: | chr3:49613991-49614506 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:49677773-49677228 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 235 |
| Conread position: | 3-515 |
| Cow position: | chr3:57856723-57856202 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:59861352-59860831 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:64028099-64028617 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 67 |
| Conread position: | 3-515 |
| Cow position: | chr3:66890975-66891488 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 67 |
| Conread position: | 4-486 |
| Cow position: | chr3:472517-472047 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 66 |
| Conread position: | 4-515 |
| Cow position: | chr3:5883526-5883006 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 66 |
| Conread position: | 5-282 |
| Cow position: | chr3:54783524-54783251 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 137, 64 |
| Conread position: | 5-304 |
| Cow position: | chr3:49333371-49333087 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 137, 38 |
| Conread position: | 5-368 |
| Cow position: | chr3:52184235-52184612 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 57, 156 |
| Conread position: | 5-375 |
| Cow position: | chr3:56097512-56097158 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 273, 16 |
| Conread position: | 5-477 |
| Cow position: | chr3:53410896-53410436 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 23 |
| Conread position: | 5-506 |
| Cow position: | chr3:60210190-60210690 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 111 |
| Conread position: | 5-515 |
| Cow position: | chr3:57484743-57485256 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 65 |
| Conread position: | 5-515 |
| Cow position: | chr3:57499538-57500044 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 67 |
| Conread position: | 5-515 |
| Cow position: | chr3:64358183-64358694 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 65 |
| Conread position: | 5-516 |
| Cow position: | chr3:21945422-21945943 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 6-515 |
| Cow position: | chr3:15178297-15177793 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 7-265 |
| Cow position: | chr3:13273955-13274212 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 47 |
| Conread position: | 7-480 |
| Cow position: | chr3:78019476-78018998 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 310 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 184, 62 |
| Conread position: | 8-478 |
| Cow position: | chr3:7323292-7322831 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 13-516 |
| Cow position: | chr3:45775112-45775600 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 340 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 15-515 |
| Cow position: | chr3:32623048-32623537 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 61 |
| Conread position: | 16-486 |
| Cow position: | chr3:72705171-72704694 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 54 |
| Conread position: | 17-515 |
| Cow position: | chr3:4738970-4739429 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 328 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 196, 44 |
| Conread position: | 25-310 |
| Cow position: | chr3:63241783-63242042 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 32-487 |
| Cow position: | chr3:70083688-70084141 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 55 |
| Conread position: | 44-487 |
| Cow position: | chr3:79433277-79433704 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 220, 56 |
| Conread position: | 49-377 |
| Cow position: | chr3:17952304-17951973 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 53-506 |
| Cow position: | chr3:58208161-58208611 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 62-513 |
| Cow position: | chr3:39326615-39326160 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 37 |
| Conread position: | 67-281 |
| Cow position: | chr3:57901139-57900927 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 70-444 |
| Cow position: | chr3:65583695-65584074 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 71-515 |
| Cow position: | chr3:40340043-40340496 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 88 |
| Conread position: | 78-515 |
| Cow position: | chr3:19938825-19938379 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 69 |
| Conread position: | 90-515 |
| Cow position: | chr3:2909194-2909608 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 35 |
| Conread position: | 94-513 |
| Cow position: | chr3:56650372-56650797 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 73 |
| Conread position: | 101-426 |
| Cow position: | chr3:3932636-3932322 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 273, 23 |
| Conread position: | 104-515 |
| Cow position: | chr3:19692208-19692612 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 108-498 |
| Cow position: | chr3:36691311-36691705 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 18 |
| Conread position: | 109-515 |
| Cow position: | chr3:47273099-47273500 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 49 |
| Conread position: | 129-515 |
| Cow position: | chr3:49140550-49140938 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 159, 46 |
| Conread position: | 132-458 |
| Cow position: | chr3:14588542-14588213 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 140-483 |
| Cow position: | chr3:16891941-16892274 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 142-515 |
| Cow position: | chr3:52864901-52865279 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 146-515 |
| Cow position: | chr3:49545333-49545703 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 12 |
| Conread position: | 159-516 |
| Cow position: | chr3:50209195-50208830 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 216, 79 |
| Conread position: | 178-471 |
| Cow position: | chr3:49308869-49309162 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 117, 88 |
| Conread position: | 183-506 |
| Cow position: | chr3:34396243-34396573 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 122 |
| Conread position: | 186-515 |
| Cow position: | chr3:19802230-19801899 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 238 |
| Conread position: | 190-474 |
| Cow position: | chr3:7168406-7168113 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 207-486 |
| Cow position: | chr3:14439943-14440230 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 215-513 |
| Cow position: | chr3:16072940-16072638 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 183 |
| Conread position: | 225-480 |
| Cow position: | chr3:8238153-8237899 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 132, 9 |
| Conread position: | 237-498 |
| Cow position: | chr3:66618939-66618675 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 135, 222 |
| Conread position: | 238-516 |
| Cow position: | chr3:13513450-13513739 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 263-506 |
| Cow position: | chr3:5996142-5996392 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 289-506 |
| Cow position: | chr3:83700445-83700659 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 320-515 |
| Cow position: | chr3:46502704-46502508 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 325-500 |
| Cow position: | chr3:66637711-66637528 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 334-485 |
| Cow position: | chr3:17951314-17951166 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 339-512 |
| Cow position: | chr3:18464099-18464278 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 33, 153 |
| Conread position: | 362-515 |
| Cow position: | chr3:53515354-53515199 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 126, 0 |
Show alignments to all cow chromosomes.