Cow genome map
Conread name: | Ss1.1-rpigca0_007986.5 |
Conread position: | 1-220 |
Cow position: | chr4:60264775-60264983 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 154 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-281 |
Cow position: | chr4:33073317-33073581 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 1-281 |
Cow position: | chr4:57979421-57979147 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 194 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-292 |
Cow position: | chr4:969251-969537 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 197 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 61, 73 |
Conread position: | 1-297 |
Cow position: | chr4:15263201-15263485 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 203 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 217, 10 |
Conread position: | 1-305 |
Cow position: | chr4:26887069-26887354 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 222 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 206, 69 |
Conread position: | 1-498 |
Cow position: | chr4:16359676-16359178 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 370, 69 |
Conread position: | 1-498 |
Cow position: | chr4:31669103-31668606 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 69 |
Conread position: | 1-499 |
Cow position: | chr4:34185078-34185564 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 344, 102 |
Conread position: | 1-502 |
Cow position: | chr4:17926462-17926967 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 75 |
Conread position: | 1-507 |
Cow position: | chr4:3830274-3829777 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 324 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 61, 124 |
Conread position: | 1-507 |
Cow position: | chr4:4176222-4175729 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 316 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 154, 61 |
Conread position: | 1-512 |
Cow position: | chr4:355703-355189 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 361, 75 |
Conread position: | 1-514 |
Cow position: | chr4:1371211-1371713 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 77 |
Conread position: | 1-515 |
Cow position: | chr4:3961384-3960866 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 370, 60 |
Conread position: | 1-515 |
Cow position: | chr4:4905939-4905425 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 69 |
Conread position: | 1-515 |
Cow position: | chr4:8598364-8598857 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 69 |
Conread position: | 1-515 |
Cow position: | chr4:13492369-13491843 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 69 |
Conread position: | 1-515 |
Cow position: | chr4:18516689-18516166 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 69 |
Conread position: | 1-515 |
Cow position: | chr4:24445408-24445929 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 75 |
Conread position: | 1-515 |
Cow position: | chr4:25599826-25600330 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 286, 69 |
Conread position: | 1-515 |
Cow position: | chr4:29531921-29532444 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 69 |
Conread position: | 1-515 |
Cow position: | chr4:36896166-36895644 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 69 |
Conread position: | 1-515 |
Cow position: | chr4:40824460-40824980 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 348 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 141, 61 |
Conread position: | 1-515 |
Cow position: | chr4:41331230-41330710 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 260, 69 |
Conread position: | 1-515 |
Cow position: | chr4:43880902-43880381 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 69 |
Conread position: | 1-515 |
Cow position: | chr4:45049505-45050025 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 69 |
Conread position: | 1-515 |
Cow position: | chr4:48026190-48025676 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 277, 69 |
Conread position: | 2-506 |
Cow position: | chr4:6214766-6215263 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 326 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 250, 60 |
Conread position: | 2-506 |
Cow position: | chr4:40405804-40406296 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 325 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 211, 68 |
Conread position: | 2-508 |
Cow position: | chr4:44724875-44724360 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 381 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 68 |
Conread position: | 3-282 |
Cow position: | chr4:11618644-11618377 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 3-322 |
Cow position: | chr4:27333235-27332926 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 3-363 |
Cow position: | chr4:66179197-66179554 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 67 |
Conread position: | 3-371 |
Cow position: | chr4:18424734-18425095 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 359, 36 |
Conread position: | 3-403 |
Cow position: | chr4:32211958-32211550 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 274, 67 |
Conread position: | 3-465 |
Cow position: | chr4:13547820-13547351 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 67 |
Conread position: | 3-486 |
Cow position: | chr4:528784-528294 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 67 |
Conread position: | 3-486 |
Cow position: | chr4:3125571-3125082 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 272, 67 |
Conread position: | 3-487 |
Cow position: | chr4:38903993-38903520 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 303 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 178, 36 |
Conread position: | 3-487 |
Cow position: | chr4:47717815-47718290 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 67 |
Conread position: | 3-487 |
Cow position: | chr4:66925790-66925307 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 255, 67 |
Conread position: | 3-506 |
Cow position: | chr4:47764379-47764888 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 67 |
Conread position: | 3-514 |
Cow position: | chr4:602784-602268 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 366, 36 |
Conread position: | 3-515 |
Cow position: | chr4:101142-101658 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 67 |
Conread position: | 3-515 |
Cow position: | chr4:1930833-1931350 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 36 |
Conread position: | 3-515 |
Cow position: | chr4:5879957-5879456 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 484, 58 |
Conread position: | 3-515 |
Cow position: | chr4:12241427-12241944 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 68 |
Conread position: | 3-515 |
Cow position: | chr4:16056393-16055864 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 344, 67 |
Conread position: | 3-515 |
Cow position: | chr4:28830819-28830315 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 67 |
Conread position: | 3-515 |
Cow position: | chr4:30307668-30308163 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 67 |
Conread position: | 3-515 |
Cow position: | chr4:33493599-33493081 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 275, 56 |
Conread position: | 3-515 |
Cow position: | chr4:43319845-43320366 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 67 |
Conread position: | 3-515 |
Cow position: | chr4:65223743-65224264 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 67 |
Conread position: | 3-516 |
Cow position: | chr4:6268837-6269350 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 67 |
Conread position: | 4-506 |
Cow position: | chr4:158305-157810 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 66 |
Conread position: | 5-486 |
Cow position: | chr4:46663983-46663502 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 72 |
Conread position: | 5-499 |
Cow position: | chr4:21338215-21338692 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 43 |
Conread position: | 5-515 |
Cow position: | chr4:11393550-11394052 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 333 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 126, 15 |
Conread position: | 7-515 |
Cow position: | chr4:1464138-1464644 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 63 |
Conread position: | 8-336 |
Cow position: | chr4:496171-496479 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 221 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 10-480 |
Cow position: | chr4:39272156-39272612 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 66 |
Conread position: | 21-516 |
Cow position: | chr4:11384177-11383700 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 18 |
Conread position: | 29-515 |
Cow position: | chr4:1049859-1050351 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 26 |
Conread position: | 39-504 |
Cow position: | chr4:51044143-51044595 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 314 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 258, 32 |
Conread position: | 94-369 |
Cow position: | chr4:10408482-10408203 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 64 |
Conread position: | 95-515 |
Cow position: | chr4:23114476-23114906 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 63 |
Conread position: | 98-333 |
Cow position: | chr4:12607808-12608040 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 178 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 87, 15 |
Conread position: | 102-515 |
Cow position: | chr4:6490655-6491076 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 56 |
Conread position: | 117-506 |
Cow position: | chr4:54190533-54190158 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 127-515 |
Cow position: | chr4:58883013-58883393 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 269 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 13, 32 |
Conread position: | 134-453 |
Cow position: | chr4:27442751-27442433 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 226 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 144, 18 |
Conread position: | 179-515 |
Cow position: | chr4:6449273-6449613 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 231 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 22, 51 |
Conread position: | 179-515 |
Cow position: | chr4:60630637-60630974 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 230 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 241, 32 |
Conread position: | 179-515 |
Cow position: | chr4:60673516-60673178 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 230 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 192, 32 |
Conread position: | 182-515 |
Cow position: | chr4:9311852-9311511 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 313 |
Conread position: | 202-442 |
Cow position: | chr4:60265191-60265442 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 186 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 207-513 |
Cow position: | chr4:21359235-21358942 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 215 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 229-515 |
Cow position: | chr4:46712773-46713062 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 160 |
Conread position: | 246-483 |
Cow position: | chr4:64982969-64982731 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 157 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 33, 115 |
Conread position: | 264-515 |
Cow position: | chr4:33073854-33074114 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 273-515 |
Cow position: | chr4:41118650-41118397 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 190 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 273-515 |
Cow position: | chr4:41954315-41954065 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 172 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 280-512 |
Cow position: | chr4:57978931-57978690 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 181 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 280-515 |
Cow position: | chr4:3358239-3357994 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 186 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 335-515 |
Cow position: | chr4:54955432-54955243 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 133 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 337-506 |
Cow position: | chr4:10408187-10408023 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 14, 0 |
Show alignments to all cow chromosomes.