Cow genome map

Conread name: Ss1.1-rpigca0_007986.5

Conread position: 1-282
Cow position: chr6:33459892-33459615 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 38

Conread position: 1-303
Cow position: chr6:15476305-15476014 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 192
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-325
Cow position: chr6:37642430-37642105 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 277, 141

Conread position: 1-366
Cow position: chr6:37116169-37115803 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 69

Conread position: 1-370
Cow position: chr6:40554565-40554924 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 38

Conread position: 1-371
Cow position: chr6:10641155-10640789 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 1-458
Cow position: chr6:28474731-28474275 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 298
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 293, 75

Conread position: 1-487
Cow position: chr6:59919249-59919737 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 71

Conread position: 1-502
Cow position: chr6:35876689-35877192 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 69

Conread position: 1-512
Cow position: chr6:27469281-27468776 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 69

Conread position: 1-513
Cow position: chr6:913671-913140 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 70

Conread position: 1-514
Cow position: chr6:526267-525764 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 320
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 261, 75

Conread position: 1-515
Cow position: chr6:3277921-3278443 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-515
Cow position: chr6:3488371-3488885 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 71

Conread position: 1-515
Cow position: chr6:3889450-3889980 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 75

Conread position: 1-515
Cow position: chr6:5951212-5951728 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 69

Conread position: 1-515
Cow position: chr6:6619410-6619891 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 326
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 366, 75

Conread position: 1-515
Cow position: chr6:15141153-15141663 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-515
Cow position: chr6:17046088-17045570 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 71

Conread position: 1-515
Cow position: chr6:20561083-20561602 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 58

Conread position: 1-515
Cow position: chr6:24239094-24238558 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 75

Conread position: 1-515
Cow position: chr6:27529974-27530488 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 69

Conread position: 1-515
Cow position: chr6:29311520-29311001 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 69

Conread position: 1-515
Cow position: chr6:30275149-30275668 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 75

Conread position: 1-515
Cow position: chr6:30479124-30478606 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 179

Conread position: 1-515
Cow position: chr6:36526072-36525552 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 33

Conread position: 1-515
Cow position: chr6:55544298-55544820 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 69

Conread position: 1-516
Cow position: chr6:701984-701460 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 1-516
Cow position: chr6:48368418-48367936 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 339
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 353, 21

Conread position: 2-281
Cow position: chr6:1100559-1100830 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 2-338
Cow position: chr6:8020103-8019787 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 68

Conread position: 2-471
Cow position: chr6:34203535-34203065 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 300
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 278, 72

Conread position: 2-478
Cow position: chr6:35420567-35421014 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 68

Conread position: 2-486
Cow position: chr6:65927965-65927483 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 74

Conread position: 2-494
Cow position: chr6:42722898-42723390 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 69

Conread position: 2-515
Cow position: chr6:15280524-15281036 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 68

Conread position: 2-515
Cow position: chr6:28275010-28274499 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 49

Conread position: 2-515
Cow position: chr6:35433562-35433052 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 334
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 260, 59

Conread position: 3-149
Cow position: chr6:7866724-7866869 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 3-279
Cow position: chr6:13847062-13846800 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 258, 67

Conread position: 3-279
Cow position: chr6:16051907-16051641 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 3-281
Cow position: chr6:1411913-1412186 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 225, 67

Conread position: 3-290
Cow position: chr6:13276827-13276543 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 3-305
Cow position: chr6:12528861-12528561 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 172, 124

Conread position: 3-371
Cow position: chr6:331441-331807 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 67

Conread position: 3-426
Cow position: chr6:44150529-44150958 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 67

Conread position: 3-468
Cow position: chr6:42927410-42926936 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 67

Conread position: 3-481
Cow position: chr6:58408885-58409365 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 3-483
Cow position: chr6:13943935-13943454 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 66

Conread position: 3-486
Cow position: chr6:1405211-1405694 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 3-486
Cow position: chr6:13104085-13103597 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 67

Conread position: 3-513
Cow position: chr6:26670836-26671345 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 67

Conread position: 3-513
Cow position: chr6:65822099-65822623 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 3-515
Cow position: chr6:2374727-2374218 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 67

Conread position: 3-515
Cow position: chr6:2554733-2554218 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 50

Conread position: 3-515
Cow position: chr6:6566632-6566119 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 67

Conread position: 3-515
Cow position: chr6:7141444-7141958 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 3-515
Cow position: chr6:8201758-8201239 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 36

Conread position: 3-515
Cow position: chr6:17598252-17598775 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 67

Conread position: 3-515
Cow position: chr6:27169604-27169083 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 67

Conread position: 3-515
Cow position: chr6:28063365-28062858 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 499, 67

Conread position: 3-515
Cow position: chr6:28491487-28492005 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 8

Conread position: 3-515
Cow position: chr6:34127380-34126858 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 67

Conread position: 3-515
Cow position: chr6:34892983-34893500 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 67

Conread position: 3-515
Cow position: chr6:43617743-43617222 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 67

Conread position: 3-515
Cow position: chr6:44029070-44028564 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 54

Conread position: 3-515
Cow position: chr6:50497431-50497943 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 67

Conread position: 3-515
Cow position: chr6:57869976-57870497 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 67

Conread position: 3-515
Cow position: chr6:65880894-65880367 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 67

Conread position: 3-515
Cow position: chr6:68026819-68026288 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 67

Conread position: 4-464
Cow position: chr6:8761278-8761741 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 66

Conread position: 4-487
Cow position: chr6:68362293-68362778 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 66

Conread position: 4-506
Cow position: chr6:10558634-10559116 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 57

Conread position: 5-510
Cow position: chr6:11353766-11353244 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 335
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 245, 71

Conread position: 5-513
Cow position: chr6:11277668-11278184 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 55

Conread position: 5-515
Cow position: chr6:38232308-38231786 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 97

Conread position: 6-349
Cow position: chr6:33388854-33388518 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 54

Conread position: 6-469
Cow position: chr6:52417671-52418123 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 292
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 45

Conread position: 6-489
Cow position: chr6:2954935-2955416 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 308
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 267, 68

Conread position: 6-506
Cow position: chr6:57009839-57010332 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 326
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 157, 70

Conread position: 7-323
Cow position: chr6:13317466-13317776 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 43

Conread position: 7-347
Cow position: chr6:62397179-62396853 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 70

Conread position: 7-515
Cow position: chr6:2886231-2885753 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 13

Conread position: 9-458
Cow position: chr6:16672405-16671968 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 298
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 30

Conread position: 9-513
Cow position: chr6:66231813-66231334 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 32

Conread position: 9-515
Cow position: chr6:59741029-59741512 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 61

Conread position: 20-368
Cow position: chr6:44524747-44525088 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 225
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 50

Conread position: 20-506
Cow position: chr6:19453934-19453453 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 50

Conread position: 21-506
Cow position: chr6:1383844-1384323 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 67

Conread position: 22-515
Cow position: chr6:7179683-7180152 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 48

Conread position: 25-515
Cow position: chr6:65899916-65900402 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 49

Conread position: 27-424
Cow position: chr6:20496695-20496310 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 249
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 235, 34

Conread position: 35-515
Cow position: chr6:21971669-21971184 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 35

Conread position: 37-515
Cow position: chr6:65841588-65841096 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 33

Conread position: 43-515
Cow position: chr6:1823264-1823739 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 29

Conread position: 66-355
Cow position: chr6:41552990-41552704 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 50, 85

Conread position: 71-515
Cow position: chr6:65909384-65908940 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 67

Conread position: 73-516
Cow position: chr6:42359722-42360160 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 295
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 195, 42

Conread position: 74-469
Cow position: chr6:13978478-13978077 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 74

Conread position: 76-515
Cow position: chr6:39437596-39437150 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 82

Conread position: 77-514
Cow position: chr6:10054567-10054137 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 81

Conread position: 81-515
Cow position: chr6:40275209-40274767 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 77

Conread position: 88-305
Cow position: chr6:49520456-49520665 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 88-515
Cow position: chr6:40314845-40314424 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 64

Conread position: 89-515
Cow position: chr6:47043489-47043917 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 69

Conread position: 96-514
Cow position: chr6:6476519-6476942 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 56

Conread position: 96-515
Cow position: chr6:21686823-21686408 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 62

Conread position: 101-479
Cow position: chr6:42564874-42564492 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 239
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 179, 61

Conread position: 107-515
Cow position: chr6:52804332-52803928 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 274
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 18

Conread position: 109-515
Cow position: chr6:45672187-45671776 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 49

Conread position: 117-506
Cow position: chr6:39908064-39907675 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 41

Conread position: 129-486
Cow position: chr6:65007738-65007383 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 38

Conread position: 135-515
Cow position: chr6:64713438-64713057 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 23

Conread position: 135-515
Cow position: chr6:64715012-64714624 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 23

Conread position: 146-515
Cow position: chr6:12092977-12093346 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 12

Conread position: 179-373
Cow position: chr6:63198289-63198480 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 182-314
Cow position: chr6:7867007-7866872 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 190-515
Cow position: chr6:51190385-51190055 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 142

Conread position: 202-480
Cow position: chr6:28509458-28509178 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 274

Conread position: 202-513
Cow position: chr6:2402083-2401752 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 93

Conread position: 232-512
Cow position: chr6:43794907-43795199 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 221

Conread position: 235-515
Cow position: chr6:41757187-41757477 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 260

Conread position: 237-515
Cow position: chr6:6935328-6935618 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 250-513
Cow position: chr6:51734-52008 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 255-506
Cow position: chr6:25357451-25357194 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 237

Conread position: 263-515
Cow position: chr6:28106002-28106254 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 5

Conread position: 264-487
Cow position: chr6:33459352-33459117 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 11

Conread position: 285-515
Cow position: chr6:52736147-52735911 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 87, 0

Conread position: 320-515
Cow position: chr6:2111246-2111446 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 181

Conread position: 324-486
Cow position: chr6:13276267-13276097 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 324-515
Cow position: chr6:13317980-13318174 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 113

Conread position: 347-515
Cow position: chr6:40554935-40555103 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 142, 11

Show alignments to all cow chromosomes.