Cow genome map
| Conread name: | Ss1.1-rpigca0_007986.5 |
| Conread position: | 1-282 |
| Cow position: | chr6:33459892-33459615 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 38 |
| Conread position: | 1-303 |
| Cow position: | chr6:15476305-15476014 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-325 |
| Cow position: | chr6:37642430-37642105 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 277, 141 |
| Conread position: | 1-366 |
| Cow position: | chr6:37116169-37115803 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 1-370 |
| Cow position: | chr6:40554565-40554924 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 38 |
| Conread position: | 1-371 |
| Cow position: | chr6:10641155-10640789 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 1-458 |
| Cow position: | chr6:28474731-28474275 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 293, 75 |
| Conread position: | 1-487 |
| Cow position: | chr6:59919249-59919737 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 71 |
| Conread position: | 1-502 |
| Cow position: | chr6:35876689-35877192 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 69 |
| Conread position: | 1-512 |
| Cow position: | chr6:27469281-27468776 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 69 |
| Conread position: | 1-513 |
| Cow position: | chr6:913671-913140 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 1-514 |
| Cow position: | chr6:526267-525764 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 320 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 261, 75 |
| Conread position: | 1-515 |
| Cow position: | chr6:3277921-3278443 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 69 |
| Conread position: | 1-515 |
| Cow position: | chr6:3488371-3488885 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 71 |
| Conread position: | 1-515 |
| Cow position: | chr6:3889450-3889980 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 75 |
| Conread position: | 1-515 |
| Cow position: | chr6:5951212-5951728 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 69 |
| Conread position: | 1-515 |
| Cow position: | chr6:6619410-6619891 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 326 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 366, 75 |
| Conread position: | 1-515 |
| Cow position: | chr6:15141153-15141663 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 69 |
| Conread position: | 1-515 |
| Cow position: | chr6:17046088-17045570 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 71 |
| Conread position: | 1-515 |
| Cow position: | chr6:20561083-20561602 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 58 |
| Conread position: | 1-515 |
| Cow position: | chr6:24239094-24238558 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 75 |
| Conread position: | 1-515 |
| Cow position: | chr6:27529974-27530488 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 69 |
| Conread position: | 1-515 |
| Cow position: | chr6:29311520-29311001 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 69 |
| Conread position: | 1-515 |
| Cow position: | chr6:30275149-30275668 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 1-515 |
| Cow position: | chr6:30479124-30478606 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 179 |
| Conread position: | 1-515 |
| Cow position: | chr6:36526072-36525552 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 1-515 |
| Cow position: | chr6:55544298-55544820 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 69 |
| Conread position: | 1-516 |
| Cow position: | chr6:701984-701460 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 1-516 |
| Cow position: | chr6:48368418-48367936 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 353, 21 |
| Conread position: | 2-281 |
| Cow position: | chr6:1100559-1100830 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-338 |
| Cow position: | chr6:8020103-8019787 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 119, 68 |
| Conread position: | 2-471 |
| Cow position: | chr6:34203535-34203065 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 278, 72 |
| Conread position: | 2-478 |
| Cow position: | chr6:35420567-35421014 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 68 |
| Conread position: | 2-486 |
| Cow position: | chr6:65927965-65927483 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 74 |
| Conread position: | 2-494 |
| Cow position: | chr6:42722898-42723390 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 69 |
| Conread position: | 2-515 |
| Cow position: | chr6:15280524-15281036 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 68 |
| Conread position: | 2-515 |
| Cow position: | chr6:28275010-28274499 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 49 |
| Conread position: | 2-515 |
| Cow position: | chr6:35433562-35433052 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 334 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 260, 59 |
| Conread position: | 3-149 |
| Cow position: | chr6:7866724-7866869 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-279 |
| Cow position: | chr6:13847062-13846800 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 258, 67 |
| Conread position: | 3-279 |
| Cow position: | chr6:16051907-16051641 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 3-281 |
| Cow position: | chr6:1411913-1412186 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 225, 67 |
| Conread position: | 3-290 |
| Cow position: | chr6:13276827-13276543 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 3-305 |
| Cow position: | chr6:12528861-12528561 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 172, 124 |
| Conread position: | 3-371 |
| Cow position: | chr6:331441-331807 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 67 |
| Conread position: | 3-426 |
| Cow position: | chr6:44150529-44150958 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 67 |
| Conread position: | 3-468 |
| Cow position: | chr6:42927410-42926936 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 67 |
| Conread position: | 3-481 |
| Cow position: | chr6:58408885-58409365 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 67 |
| Conread position: | 3-483 |
| Cow position: | chr6:13943935-13943454 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 66 |
| Conread position: | 3-486 |
| Cow position: | chr6:1405211-1405694 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 67 |
| Conread position: | 3-486 |
| Cow position: | chr6:13104085-13103597 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 3-513 |
| Cow position: | chr6:26670836-26671345 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 67 |
| Conread position: | 3-513 |
| Cow position: | chr6:65822099-65822623 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:2374727-2374218 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:2554733-2554218 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 50 |
| Conread position: | 3-515 |
| Cow position: | chr6:6566632-6566119 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:7141444-7141958 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:8201758-8201239 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 36 |
| Conread position: | 3-515 |
| Cow position: | chr6:17598252-17598775 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:27169604-27169083 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:28063365-28062858 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 499, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:28491487-28492005 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 8 |
| Conread position: | 3-515 |
| Cow position: | chr6:34127380-34126858 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:34892983-34893500 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:43617743-43617222 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:44029070-44028564 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 54 |
| Conread position: | 3-515 |
| Cow position: | chr6:50497431-50497943 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:57869976-57870497 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:65880894-65880367 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 67 |
| Conread position: | 3-515 |
| Cow position: | chr6:68026819-68026288 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 67 |
| Conread position: | 4-464 |
| Cow position: | chr6:8761278-8761741 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 66 |
| Conread position: | 4-487 |
| Cow position: | chr6:68362293-68362778 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 66 |
| Conread position: | 4-506 |
| Cow position: | chr6:10558634-10559116 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 57 |
| Conread position: | 5-510 |
| Cow position: | chr6:11353766-11353244 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 245, 71 |
| Conread position: | 5-513 |
| Cow position: | chr6:11277668-11278184 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 55 |
| Conread position: | 5-515 |
| Cow position: | chr6:38232308-38231786 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 97 |
| Conread position: | 6-349 |
| Cow position: | chr6:33388854-33388518 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 54 |
| Conread position: | 6-469 |
| Cow position: | chr6:52417671-52418123 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 6-489 |
| Cow position: | chr6:2954935-2955416 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 308 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 267, 68 |
| Conread position: | 6-506 |
| Cow position: | chr6:57009839-57010332 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 326 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 157, 70 |
| Conread position: | 7-323 |
| Cow position: | chr6:13317466-13317776 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 43 |
| Conread position: | 7-347 |
| Cow position: | chr6:62397179-62396853 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 7-515 |
| Cow position: | chr6:2886231-2885753 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 13 |
| Conread position: | 9-458 |
| Cow position: | chr6:16672405-16671968 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 9-513 |
| Cow position: | chr6:66231813-66231334 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 32 |
| Conread position: | 9-515 |
| Cow position: | chr6:59741029-59741512 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 20-368 |
| Cow position: | chr6:44524747-44525088 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 117, 50 |
| Conread position: | 20-506 |
| Cow position: | chr6:19453934-19453453 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 21-506 |
| Cow position: | chr6:1383844-1384323 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 67 |
| Conread position: | 22-515 |
| Cow position: | chr6:7179683-7180152 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 48 |
| Conread position: | 25-515 |
| Cow position: | chr6:65899916-65900402 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 49 |
| Conread position: | 27-424 |
| Cow position: | chr6:20496695-20496310 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 235, 34 |
| Conread position: | 35-515 |
| Cow position: | chr6:21971669-21971184 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 35 |
| Conread position: | 37-515 |
| Cow position: | chr6:65841588-65841096 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 33 |
| Conread position: | 43-515 |
| Cow position: | chr6:1823264-1823739 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 29 |
| Conread position: | 66-355 |
| Cow position: | chr6:41552990-41552704 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 71-515 |
| Cow position: | chr6:65909384-65908940 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 67 |
| Conread position: | 73-516 |
| Cow position: | chr6:42359722-42360160 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 195, 42 |
| Conread position: | 74-469 |
| Cow position: | chr6:13978478-13978077 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 76-515 |
| Cow position: | chr6:39437596-39437150 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 82 |
| Conread position: | 77-514 |
| Cow position: | chr6:10054567-10054137 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 81 |
| Conread position: | 81-515 |
| Cow position: | chr6:40275209-40274767 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 77 |
| Conread position: | 88-305 |
| Cow position: | chr6:49520456-49520665 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 88-515 |
| Cow position: | chr6:40314845-40314424 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 89-515 |
| Cow position: | chr6:47043489-47043917 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 69 |
| Conread position: | 96-514 |
| Cow position: | chr6:6476519-6476942 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 56 |
| Conread position: | 96-515 |
| Cow position: | chr6:21686823-21686408 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 62 |
| Conread position: | 101-479 |
| Cow position: | chr6:42564874-42564492 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 179, 61 |
| Conread position: | 107-515 |
| Cow position: | chr6:52804332-52803928 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 109-515 |
| Cow position: | chr6:45672187-45671776 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 49 |
| Conread position: | 117-506 |
| Cow position: | chr6:39908064-39907675 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 41 |
| Conread position: | 129-486 |
| Cow position: | chr6:65007738-65007383 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 38 |
| Conread position: | 135-515 |
| Cow position: | chr6:64713438-64713057 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 135-515 |
| Cow position: | chr6:64715012-64714624 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 146-515 |
| Cow position: | chr6:12092977-12093346 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 12 |
| Conread position: | 179-373 |
| Cow position: | chr6:63198289-63198480 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 182-314 |
| Cow position: | chr6:7867007-7866872 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 190-515 |
| Cow position: | chr6:51190385-51190055 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 142 |
| Conread position: | 202-480 |
| Cow position: | chr6:28509458-28509178 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 274 |
| Conread position: | 202-513 |
| Cow position: | chr6:2402083-2401752 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 93 |
| Conread position: | 232-512 |
| Cow position: | chr6:43794907-43795199 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 221 |
| Conread position: | 235-515 |
| Cow position: | chr6:41757187-41757477 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 260 |
| Conread position: | 237-515 |
| Cow position: | chr6:6935328-6935618 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 250-513 |
| Cow position: | chr6:51734-52008 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 255-506 |
| Cow position: | chr6:25357451-25357194 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 237 |
| Conread position: | 263-515 |
| Cow position: | chr6:28106002-28106254 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 5 |
| Conread position: | 264-487 |
| Cow position: | chr6:33459352-33459117 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 285-515 |
| Cow position: | chr6:52736147-52735911 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 320-515 |
| Cow position: | chr6:2111246-2111446 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 181 |
| Conread position: | 324-486 |
| Cow position: | chr6:13276267-13276097 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 324-515 |
| Cow position: | chr6:13317980-13318174 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 113 |
| Conread position: | 347-515 |
| Cow position: | chr6:40554935-40555103 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 142, 11 |
Show alignments to all cow chromosomes.