Cow genome map
| Conread name: | Ss1.1-rpigca0_014171.5.5 |
| Conread position: | 35-315 |
| Cow position: | chr23:23177867-23177592 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 48-320 |
| Cow position: | chr23:23096967-23096696 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 53-320 |
| Cow position: | chr23:20551142-20551409 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 235 |
| Conread position: | 53-320 |
| Cow position: | chr23:21180741-21180474 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-320 |
| Cow position: | chr23:23022929-23022662 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 53-320 |
| Cow position: | chr23:23049471-23049204 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 311-595 |
| Cow position: | chr23:21180287-21180003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-595 |
| Cow position: | chr23:23022459-23022176 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 311-595 |
| Cow position: | chr23:23049041-23048757 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-595 |
| Cow position: | chr23:23096509-23096228 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 312-595 |
| Cow position: | chr23:20551600-20551882 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 312-595 |
| Cow position: | chr23:23177323-23177038 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 157 |
| Conread position: | 415-595 |
| Cow position: | chr23:24589576-24589754 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 593-763 |
| Cow position: | chr23:23176142-23175972 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-870 |
| Cow position: | chr23:23048188-23047911 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-871 |
| Cow position: | chr23:20553184-20553462 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-871 |
| Cow position: | chr23:21000454-21000732 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-871 |
| Cow position: | chr23:21179119-21178841 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-871 |
| Cow position: | chr23:23021253-23020975 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 593-871 |
| Cow position: | chr23:23093772-23093494 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 594-871 |
| Cow position: | chr23:24591581-24591855 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 871-971 |
| Cow position: | chr23:23047794-23047694 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 871-972 |
| Cow position: | chr23:21178724-21178626 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 871-972 |
| Cow position: | chr23:23020859-23020759 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 871-972 |
| Cow position: | chr23:23093378-23093277 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.