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Cow genome map

           
Conread name:
           
Ss1.1-rpigca0_015731.5
        

               
Conread position:
               
2-282
               

               
Cow position:
               
chr13:44003358-44003654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 86
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr13:23795686-23795447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
29-258
               

               
Cow position:
               
chr13:11686263-11686037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
52-284
               

               
Cow position:
               
chr13:7046597-7046826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr13:15144113-15143886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 46
               

               
Conread position:
               
60-284
               

               
Cow position:
               
chr13:37986023-37985789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
63-308
               

               
Cow position:
               
chr13:49823749-49824006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
64-262
               

               
Cow position:
               
chr13:242361-242568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
66-284
               

               
Cow position:
               
chr13:51940474-51940689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
79-290
               

               
Cow position:
               
chr13:46515799-46516026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
81-306
               

               
Cow position:
               
chr13:49023122-49022889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
82-282
               

               
Cow position:
               
chr13:52249302-52249095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
84-291
               

               
Cow position:
               
chr13:19223401-19223617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
87-304
               

               
Cow position:
               
chr13:12282591-12282799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
88-297
               

               
Cow position:
               
chr13:45073493-45073283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
89-284
               

               
Cow position:
               
chr13:55765423-55765223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
91-223
               

               
Cow position:
               
chr13:20654110-20653977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
91-283
               

               
Cow position:
               
chr13:52477883-52477693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
92-278
               

               
Cow position:
               
chr13:34300093-34299910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
92-283
               

               
Cow position:
               
chr13:14543888-14544089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
92-284
               

               
Cow position:
               
chr13:56535223-56535409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
92-288
               

               
Cow position:
               
chr13:52459720-52459521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
92-290
               

               
Cow position:
               
chr13:33054613-33054408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
93, 18
               

               
Conread position:
               
93-283
               

               
Cow position:
               
chr13:16525470-16525269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
93-284
               

               
Cow position:
               
chr13:9124686-9124879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
93-284
               

               
Cow position:
               
chr13:24753651-24753842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
93-290
               

               
Cow position:
               
chr13:21024737-21024949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
93-298
               

               
Cow position:
               
chr13:15996791-15997002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
94-326
               

               
Cow position:
               
chr13:17135457-17135219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
95-284
               

               
Cow position:
               
chr13:14063761-14063566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
97-284
               

               
Cow position:
               
chr13:20821075-20820874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
97-290
               

               
Cow position:
               
chr13:4552587-4552779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
97-290
               

               
Cow position:
               
chr13:8240440-8240624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
99-283
               

               
Cow position:
               
chr13:28071644-28071826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
99-290
               

               
Cow position:
               
chr13:9800283-9800475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
137, 78
               

               
Conread position:
               
99-323
               

               
Cow position:
               
chr13:10986747-10986507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
100-283
               

               
Cow position:
               
chr13:6189836-6189646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
100-284
               

               
Cow position:
               
chr13:33854913-33854729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
100-286
               

               
Cow position:
               
chr13:28536559-28536360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
101-223
               

               
Cow position:
               
chr13:14383840-14383961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
101-278
               

               
Cow position:
               
chr13:20288102-20288287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
101-281
               

               
Cow position:
               
chr13:22729642-22729450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
101-283
               

               
Cow position:
               
chr13:25579428-25579236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
101-284
               

               
Cow position:
               
chr13:37030112-37030297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
101-289
               

               
Cow position:
               
chr13:28605631-28605431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr13:18997161-18997401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
123, 102
               

               
Conread position:
               
102-278
               

               
Cow position:
               
chr13:43479827-43480009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
102-279
               

               
Cow position:
               
chr13:27871536-27871723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
102-282
               

               
Cow position:
               
chr13:38329385-38329569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 17
               

               
Conread position:
               
102-284
               

               
Cow position:
               
chr13:12876211-12876020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 154
               

               
Conread position:
               
102-284
               

               
Cow position:
               
chr13:13797052-13796856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
102-284
               

               
Cow position:
               
chr13:56035092-56034904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
102-290
               

               
Cow position:
               
chr13:21127578-21127376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
102-290
               

               
Cow position:
               
chr13:45593687-45593882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 145
               

               
Conread position:
               
103-275
               

               
Cow position:
               
chr13:9551129-9551307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
103-284
               

               
Cow position:
               
chr13:17813237-17813426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
103-290
               

               
Cow position:
               
chr13:57770216-57770024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
103-300
               

               
Cow position:
               
chr13:23975400-23975192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 154
               

               
Conread position:
               
103-306
               

               
Cow position:
               
chr13:20789754-20789533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
104-258
               

               
Cow position:
               
chr13:6996921-6997082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
104-262
               

               
Cow position:
               
chr13:38484310-38484469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
104-283
               

               
Cow position:
               
chr13:10423288-10423475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
104-284
               

               
Cow position:
               
chr13:17569329-17569146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
104-284
               

               
Cow position:
               
chr13:52893914-52894102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
104-290
               

               
Cow position:
               
chr13:585107-584909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
105-284
               

               
Cow position:
               
chr13:28552353-28552543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
105-284
               

               
Cow position:
               
chr13:33974514-33974688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 98
               

               
Conread position:
               
105-284
               

               
Cow position:
               
chr13:45499000-45499184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
105-306
               

               
Cow position:
               
chr13:19393064-19393270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
106-291
               

               
Cow position:
               
chr13:3149664-3149469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
110-284
               

               
Cow position:
               
chr13:18491379-18491551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
110-284
               

               
Cow position:
               
chr13:57986161-57985983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
110-290
               

               
Cow position:
               
chr13:1363234-1363420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 18
               

               
Conread position:
               
111-289
               

               
Cow position:
               
chr13:17823177-17822990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
111-291
               

               
Cow position:
               
chr13:28376786-28376594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
111-297
               

               
Cow position:
               
chr13:18851862-18852049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 90
               

               
Conread position:
               
112-284
               

               
Cow position:
               
chr13:20579693-20579865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
112-289
               

               
Cow position:
               
chr13:17159107-17158918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
115-284
               

               
Cow position:
               
chr13:17821480-17821315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
115-290
               

               
Cow position:
               
chr13:37946608-37946428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
115-290
               

               
Cow position:
               
chr13:47186008-47186199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
115-307
               

               
Cow position:
               
chr13:16714490-16714286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
116-275
               

               
Cow position:
               
chr13:5659987-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
116-284
               

               
Cow position:
               
chr13:16163367-16163537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
116-284
               

               
Cow position:
               
chr13:23667034-23667208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
116-284
               

               
Cow position:
               
chr13:32017737-32017557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
116-286
               

               
Cow position:
               
chr13:49457481-49457641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
116-289
               

               
Cow position:
               
chr13:53724944-53724778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
116-290
               

               
Cow position:
               
chr13:12923653-12923839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
116-290
               

               
Cow position:
               
chr13:19582302-19582121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 134
               

               
Conread position:
               
116-290
               

               
Cow position:
               
chr13:49795817-49795988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
108, 87
               

               
Conread position:
               
116-290
               

               
Cow position:
               
chr13:52177381-52177562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
116-297
               

               
Cow position:
               
chr13:38035617-38035807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
116-299
               

               
Cow position:
               
chr13:17292350-17292161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
117-253
               

               
Cow position:
               
chr13:45439312-45439455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
117-274
               

               
Cow position:
               
chr13:56432041-56431880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
117-278
               

               
Cow position:
               
chr13:56686224-56686383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
117-279
               

               
Cow position:
               
chr13:41155275-41155117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 78
               

               
Conread position:
               
117-282
               

               
Cow position:
               
chr13:20314845-20314669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
117-284
               

               
Cow position:
               
chr13:19883254-19883082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 138
               

               
Conread position:
               
117-284
               

               
Cow position:
               
chr13:25817310-25817481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
117-285
               

               
Cow position:
               
chr13:35557331-35557155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
117-289
               

               
Cow position:
               
chr13:311212-311398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
117-289
               

               
Cow position:
               
chr13:15991451-15991270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
118-275
               

               
Cow position:
               
chr13:58421871-58422021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
119-244
               

               
Cow position:
               
chr13:53138222-53138349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
119-246
               

               
Cow position:
               
chr13:9612858-9612986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
119-257
               

               
Cow position:
               
chr13:17745041-17745176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
119-257
               

               
Cow position:
               
chr13:25561412-25561548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
119-278
               

               
Cow position:
               
chr13:43342349-43342517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
119-279
               

               
Cow position:
               
chr13:6951362-6951529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
119-279
               

               
Cow position:
               
chr13:9327310-9327137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
119-279
               

               
Cow position:
               
chr13:47538368-47538210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
119-280
               

               
Cow position:
               
chr13:22601904-22601742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
119-280
               

               
Cow position:
               
chr13:52891032-52891184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
119-282
               

               
Cow position:
               
chr13:6079621-6079459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
119-282
               

               
Cow position:
               
chr13:6113749-6113573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
119-283
               

               
Cow position:
               
chr13:5175381-5175551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 131
               

               
Conread position:
               
119-283
               

               
Cow position:
               
chr13:17975180-17975009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
119-283
               

               
Cow position:
               
chr13:50646847-50646677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:6973944-6974116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:8367500-8367670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 153
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:16020641-16020806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:18058464-18058295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:18999312-18999490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:20473892-20473727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 8
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:24715031-24715196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:25504318-25504487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:25679109-25679276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:25926570-25926745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:28081499-28081677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:37405497-37405666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:37614415-37614241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:41806558-41806727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:53865417-53865591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:54582657-54582827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 8
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:55713643-55713481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 46
               

               
Conread position:
               
119-284
               

               
Cow position:
               
chr13:55775145-55775315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 136
               

               
Conread position:
               
119-286
               

               
Cow position:
               
chr13:6540519-6540359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
119-287
               

               
Cow position:
               
chr13:2338975-2339139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
119-290
               

               
Cow position:
               
chr13:15069755-15069922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
119-290
               

               
Cow position:
               
chr13:41979355-41979184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
119-306
               

               
Cow position:
               
chr13:34533148-34532951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 72
               

               
Conread position:
               
119-320
               

               
Cow position:
               
chr13:37555088-37554878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
84, 8
               

               
Conread position:
               
120-274
               

               
Cow position:
               
chr13:5092612-5092449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
120-274
               

               
Cow position:
               
chr13:9108890-9108730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
120-275
               

               
Cow position:
               
chr13:15041692-15041527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
120-280
               

               
Cow position:
               
chr13:10757923-10758078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
120-282
               

               
Cow position:
               
chr13:13533879-13533712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
120-283
               

               
Cow position:
               
chr13:15060436-15060594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
120-283
               

               
Cow position:
               
chr13:50623028-50622858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr13:3594115-3594276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr13:8393099-8392942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr13:13501828-13501663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr13:14411674-14411850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr13:21426036-21425875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr13:49283996-49283825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
120-284
               

               
Cow position:
               
chr13:52055810-52055637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
120-289
               

               
Cow position:
               
chr13:11942393-11942220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
120-290
               

               
Cow position:
               
chr13:15195418-15195244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
120-300
               

               
Cow position:
               
chr13:20519854-20520033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
120-306
               

               
Cow position:
               
chr13:9161717-9161902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
121-284
               

               
Cow position:
               
chr13:17611768-17611597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
121-284
               

               
Cow position:
               
chr13:21188167-21188323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
121-284
               

               
Cow position:
               
chr13:40491002-40491170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
121-284
               

               
Cow position:
               
chr13:57322933-57323101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
121-284
               

               
Cow position:
               
chr13:58763824-58763663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
121-290
               

               
Cow position:
               
chr13:10522724-10522899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
121-291
               

               
Cow position:
               
chr13:54128047-54127865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
121-305
               

               
Cow position:
               
chr13:15114251-15114442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
122-284
               

               
Cow position:
               
chr13:8637479-8637653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
123-231
               

               
Cow position:
               
chr13:25082888-25083000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
123-262
               

               
Cow position:
               
chr13:2529166-2529017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
123-270
               

               
Cow position:
               
chr13:14782134-14782283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
123-270
               

               
Cow position:
               
chr13:21886895-21886736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
123-271
               

               
Cow position:
               
chr13:53847333-53847179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
123-274
               

               
Cow position:
               
chr13:866917-867068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
123-274
               

               
Cow position:
               
chr13:55007984-55007826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
123-275
               

               
Cow position:
               
chr13:30148769-30148617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
123-277
               

               
Cow position:
               
chr13:29665803-29665969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
123-278
               

               
Cow position:
               
chr13:48373530-48373369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
123-279
               

               
Cow position:
               
chr13:27180823-27180991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
123-281
               

               
Cow position:
               
chr13:21170314-21170478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
123-281
               

               
Cow position:
               
chr13:23823244-23823082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
123-281
               

               
Cow position:
               
chr13:43139413-43139262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
123-282
               

               
Cow position:
               
chr13:14644839-14645004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
123-282
               

               
Cow position:
               
chr13:42200406-42200572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
123-283
               

               
Cow position:
               
chr13:22115461-22115632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:369340-369168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:2393173-2393341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:5263493-5263326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:5911105-5910941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:6616977-6616804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:7104444-7104609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:7149713-7149556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:8450119-8450285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:9707961-9707794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 130
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:9975282-9975119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 77
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:10220743-10220916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:14576001-14576168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:15194935-15194780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:16038497-16038331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:18166518-18166687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:19188100-19188256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:20535492-20535654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:20839366-20839521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:20880039-20879869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:21275642-21275814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:21288299-21288130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:22085946-22085791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:24107760-24107593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:24215891-24215719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:28520622-28520472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:29802413-29802570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:29831641-29831476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:34261021-34261186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:37775420-37775252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:47007928-47007764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 106
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:50583032-50582869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:54128812-54128641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:60509339-60509165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
123-284
               

               
Cow position:
               
chr13:62007893-62008062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
123-285
               

               
Cow position:
               
chr13:55674424-55674252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
123-287
               

               
Cow position:
               
chr13:390851-390682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
123-287
               

               
Cow position:
               
chr13:26377635-26377458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr13:14795992-14796168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
123-288
               

               
Cow position:
               
chr13:15193103-15192927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
123-289
               

               
Cow position:
               
chr13:15162850-15162671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
123-289
               

               
Cow position:
               
chr13:17498007-17498176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr13:620463-620288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr13:8362961-8362783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 169
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr13:11146839-11147022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr13:11231511-11231336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 160
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr13:24094531-24094352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr13:47243766-47243590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
123-290
               

               
Cow position:
               
chr13:54236596-54236768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
123-294
               

               
Cow position:
               
chr13:45074117-45073948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr13:3153533-3153726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr13:12670666-12670480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
123-306
               

               
Cow position:
               
chr13:21981184-21980997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
123-307
               

               
Cow position:
               
chr13:11434788-11434596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
123-313
               

               
Cow position:
               
chr13:43576796-43576995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 164
               

               
Conread position:
               
124-223
               

               
Cow position:
               
chr13:30809588-30809492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
124-267
               

               
Cow position:
               
chr13:16106208-16106352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
124-278
               

               
Cow position:
               
chr13:15289132-15288972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
124-278
               

               
Cow position:
               
chr13:22345488-22345325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
124-279
               

               
Cow position:
               
chr13:5758545-5758392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr13:21277670-21277514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr13:27198701-27198861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
124-282
               

               
Cow position:
               
chr13:53619787-53619957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
124-283
               

               
Cow position:
               
chr13:4965187-4965344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:151757-151918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:1339358-1339186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:7265319-7265165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:12974602-12974769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:13088819-13088984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:17624104-17624277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:20174524-20174696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:37593159-37592991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:48126891-48127063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:49356262-49356094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
124-284
               

               
Cow position:
               
chr13:52913663-52913828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
124-285
               

               
Cow position:
               
chr13:47676150-47675979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
124-286
               

               
Cow position:
               
chr13:23399553-23399723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
124-288
               

               
Cow position:
               
chr13:6972167-6972342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
124-290
               

               
Cow position:
               
chr13:6980712-6980884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
124-290
               

               
Cow position:
               
chr13:15993170-15993351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
124-304
               

               
Cow position:
               
chr13:21235881-21235695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
65, 175
               

               
Conread position:
               
127-282
               

               
Cow position:
               
chr13:5671796-5671633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
127-282
               

               
Cow position:
               
chr13:16711136-16711302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:2776074-2776243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:8374971-8374818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:9687879-9687725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:11565629-11565792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:17089723-17089565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:20784384-20784545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:21171782-21171617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:21242286-21242129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:26395249-26395416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:31507652-31507489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:36876855-36877015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:40541319-40541150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:42849340-42849178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
127-284
               

               
Cow position:
               
chr13:57355847-57355997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
127-285
               

               
Cow position:
               
chr13:15257577-15257413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
127-290
               

               
Cow position:
               
chr13:10040766-10040605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
127-290
               

               
Cow position:
               
chr13:10989284-10989109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
127-291
               

               
Cow position:
               
chr13:37723378-37723542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
127-305
               

               
Cow position:
               
chr13:40483190-40483005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 158
               

               
Conread position:
               
128-268
               

               
Cow position:
               
chr13:25313358-25313210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
128-275
               

               
Cow position:
               
chr13:4665059-4664911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
128-281
               

               
Cow position:
               
chr13:16908004-16908169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
128-282
               

               
Cow position:
               
chr13:13320588-13320750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
128-283
               

               
Cow position:
               
chr13:7097377-7097541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:11201829-11201996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:18093078-18092920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:24230001-24230169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 16
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:24796674-24796833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:25435315-25435168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
130, 63
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:44201800-44201962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 102
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:48597700-48597864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
128-284
               

               
Cow position:
               
chr13:55494728-55494571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
128-290
               

               
Cow position:
               
chr13:1568725-1568889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 152
               

               
Conread position:
               
128-291
               

               
Cow position:
               
chr13:10845409-10845566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
128-295
               

               
Cow position:
               
chr13:24585839-24586013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
129-258
               

               
Cow position:
               
chr13:3003278-3003404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
129-284
               

               
Cow position:
               
chr13:19278887-19279050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
130-281
               

               
Cow position:
               
chr13:52536364-52536514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
130-284
               

               
Cow position:
               
chr13:12673495-12673340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
130-285
               

               
Cow position:
               
chr13:18197815-18197652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
130-305
               

               
Cow position:
               
chr13:11260070-11260248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
130-309
               

               
Cow position:
               
chr13:62475034-62474858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
149, 65
               

               
Conread position:
               
133-284
               

               
Cow position:
               
chr13:13265360-13265516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
133-290
               

               
Cow position:
               
chr13:9492572-9492729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
134-278
               

               
Cow position:
               
chr13:20217601-20217449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
134-278
               

               
Cow position:
               
chr13:26698700-26698549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
134-282
               

               
Cow position:
               
chr13:43292416-43292272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr13:4404332-4404486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr13:12206859-12207003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr13:18340328-18340488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr13:20137615-20137776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr13:20534698-20534851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr13:37069139-37069300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr13:52027338-52027182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
136-278
               

               
Cow position:
               
chr13:48165624-48165477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
136-287
               

               
Cow position:
               
chr13:57446314-57446159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
136-290
               

               
Cow position:
               
chr13:56958776-56958933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
137-284
               

               
Cow position:
               
chr13:10711614-10711460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
138-277
               

               
Cow position:
               
chr13:6465882-6465741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
138-284
               

               
Cow position:
               
chr13:38012140-38012287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
138-290
               

               
Cow position:
               
chr13:15083462-15083624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
155-284
               

               
Cow position:
               
chr13:9391382-9391515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
46, 10
               

               
Conread position:
               
156-278
               

               
Cow position:
               
chr13:20666567-20666437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
161-289
               

               
Cow position:
               
chr13:23270367-23270245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
161-289
               

               
Cow position:
               
chr13:47193220-47193350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
162-285
               

               
Cow position:
               
chr13:21294906-21295031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
162-290
               

               
Cow position:
               
chr13:54652493-54652360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
163-290
               

               
Cow position:
               
chr13:8232835-8232963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
171-284
               

               
Cow position:
               
chr13:16790047-16790164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
190-284
               

               
Cow position:
               
chr13:3211405-3211504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               
Show alignments to all cow chromosomes.