Cow genome map


           Conread name:
           Ss1.1-rpigcb_12875.5
        

               Conread position:
               274-548
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               211, 6
               

               Conread position:
               275-530
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               275-535
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               275-535
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               219, 5
               

               Conread position:
               275-536
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               220, 5
               

               Conread position:
               275-539
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               209, 5
               

               Conread position:
               275-543
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               165, 5
               

               Conread position:
               275-543
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               217, 203
               

               Conread position:
               275-548
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               207, 5
               

               Conread position:
               275-548
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 5
               

               Conread position:
               275-548
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               275-548
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               108, 5
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               35, 5
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               220, 5
               

               Conread position:
               275-549
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               52, 5
               

               Conread position:
               275-551
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               275-552
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               275-552
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               209, 5
               

               Conread position:
               275-552
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               275-552
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               81, 5
               

               Conread position:
               275-552
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               107, 5
               

               Conread position:
               275-552
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               277-552
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               277-552
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 55
               

               Conread position:
               278-542
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 199
               

               Conread position:
               280-536
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               160, 152
               

               Conread position:
               280-541
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               232, 227
               

               Conread position:
               280-542
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               204, 196
               

               Conread position:
               280-542
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               280-543
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-543
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               87, 80
               

               Conread position:
               280-548
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               217, 199
               

               Conread position:
               280-548
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               280-549
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               280-549
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-549
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               49, 55
               

               Conread position:
               280-551
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               280-551
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               236, 0
               

               Conread position:
               280-552
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               158, 150
               

               Conread position:
               280-552
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               217, 199
               

               Conread position:
               280-552
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               204, 198
               

               Conread position:
               280-552
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               218, 198
               

               Conread position:
               281-549
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               282-552
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               283-548
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               283-549
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               290-542
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               222, 212
               

               Conread position:
               290-552
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               300-548
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               304-552
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               362-549
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 30
               
Show alignments to all cow chromosomes.