Cow genome map
| Conread name: | Ss1.1-rpigcb_12875.5 |
| Conread position: | 273-544 |
| Cow position: | chr21:12608348-12608077 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 275-548 |
| Cow position: | chr21:12658828-12659101 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 275-549 |
| Cow position: | chr21:34222971-34222698 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 5 |
| Conread position: | 276-542 |
| Cow position: | chr21:12658913-12659179 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 276-548 |
| Cow position: | chr21:12608261-12607989 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 276-548 |
| Cow position: | chr21:12659165-12659437 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-548 |
| Cow position: | chr21:12659333-12659605 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 172, 166 |
| Conread position: | 276-549 |
| Cow position: | chr21:12659081-12659354 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-549 |
| Cow position: | chr21:12659585-12659858 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 279-548 |
| Cow position: | chr21:12659420-12659689 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 279-550 |
| Cow position: | chr21:12659252-12659523 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 253, 247 |
| Conread position: | 280-536 |
| Cow position: | chr21:34222799-34222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 236, 241 |
| Conread position: | 280-548 |
| Cow position: | chr21:12659001-12659269 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-549 |
| Cow position: | chr21:12608761-12608492 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 280-549 |
| Cow position: | chr21:34222883-34222614 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 227, 222 |
| Conread position: | 280-551 |
| Cow position: | chr21:34223051-34222780 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 379-548 |
| Cow position: | chr21:12608914-12608745 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 99 |
Show alignments to all cow chromosomes.