Cow genome map

Conread name: Ss1.1-rpigcb_12875.5

Conread position: 195-548
Cow position:
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 46

Conread position: 240-548
Cow position:
Alignm length: 312
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 19

Conread position: 273-524
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 44, 7

Conread position: 275-480
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 5

Conread position: 275-529
Cow position:
Alignm length: 256
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 213, 5

Conread position: 275-542
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 275-548
Cow position:
Alignm length: 275
Alignm identity: 195
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 217, 5

Conread position: 275-548
Cow position:
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 5

Conread position: 275-550
Cow position:
Alignm length: 278
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 5

Conread position: 275-551
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 5

Conread position: 275-552
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 275-552
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 275-552
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 5

Conread position: 275-552
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 35, 5

Conread position: 275-552
Cow position:
Alignm length: 279
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 259, 5

Conread position: 277-552
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 33, 47

Conread position: 278-552
Cow position:
Alignm length: 276
Alignm identity: 180
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 210, 87

Conread position: 279-549
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 205, 199

Conread position: 280-524
Cow position:
Alignm length: 245
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 280-536
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 205, 198

Conread position: 280-536
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 32

Conread position: 280-541
Cow position:
Alignm length: 263
Alignm identity: 186
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 208, 199

Conread position: 280-542
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 198

Conread position: 280-548
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 204, 198

Conread position: 280-548
Cow position:
Alignm length: 270
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 43

Conread position: 280-549
Cow position:
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 36

Conread position: 280-549
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 211, 198

Conread position: 280-549
Cow position:
Alignm length: 271
Alignm identity: 177
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 40

Conread position: 280-550
Cow position:
Alignm length: 271
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 280-552
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 280-552
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 280-552
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 208, 198

Conread position: 280-552
Cow position:
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 211, 198

Conread position: 280-552
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 205, 196

Conread position: 280-552
Cow position:
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 208, 199

Conread position: 280-552
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 36, 29

Conread position: 280-552
Cow position:
Alignm length: 274
Alignm identity: 177
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 69

Conread position: 280-552
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 280-552
Cow position:
Alignm length: 273
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 281-524
Cow position:
Alignm length: 245
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 8

Conread position: 281-549
Cow position:
Alignm length: 269
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 283-552
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 26, 41

Conread position: 289-548
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 199, 42

Conread position: 289-549
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 21, 31

Conread position: 289-552
Cow position:
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 204, 189

Conread position: 289-552
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 290-548
Cow position:
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 291-552
Cow position:
Alignm length: 262
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 292-549
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 146, 139

Conread position: 295-552
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 196, 183

Conread position: 300-552
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 320-549
Cow position:
Alignm length: 232
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 83

Conread position: 323-548
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 36

Conread position: 358-549
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 363-549
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.