Cow genome map


           Conread name:
           Ss1.1-rpigcb_12875.5
        

               Conread position:
               275-524
               

               Cow position:
               chr29:39627095-39626847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 5
               

               Conread position:
               277-549
               

               Cow position:
               chr29:39627343-39627074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               280-542
               

               Cow position:
               chr29:39627175-39626913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 41
               

               Conread position:
               281-549
               

               Cow position:
               chr29:39627423-39627158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               282-530
               

               Cow position:
               chr29:39627506-39627258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               128, 111
               

               Conread position:
               292-549
               

               Cow position:
               chr29:39627580-39627323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               326-543
               

               Cow position:
               chr29:39627213-39626996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               88, 77
               
Show alignments to all cow chromosomes.