Cow genome map
| Conread name: | Ss1.1-rpigcb_12875.5 |
| Conread position: | 265-552 |
| Cow position: | chr3:77350927-77350643 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 275-539 |
| Cow position: | chr3:62742773-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 275-548 |
| Cow position: | chr3:62722077-62721805 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 34, 5 |
| Conread position: | 275-548 |
| Cow position: | chr3:62722161-62721889 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 209, 5 |
| Conread position: | 275-548 |
| Cow position: | chr3:68045933-68046205 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 79, 5 |
| Conread position: | 275-549 |
| Cow position: | chr3:62742275-62742547 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 275-552 |
| Cow position: | chr3:62721909-62721633 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 275-552 |
| Cow position: | chr3:62722245-62721969 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 81, 5 |
| Conread position: | 280-539 |
| Cow position: | chr3:68027092-68027351 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 280-543 |
| Cow position: | chr3:68045769-68046032 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-548 |
| Cow position: | chr3:68027344-68027612 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 43 |
| Conread position: | 280-548 |
| Cow position: | chr3:68045685-68045953 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 208, 196 |
| Conread position: | 280-549 |
| Cow position: | chr3:62721989-62721720 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-549 |
| Cow position: | chr3:62742614-62742878 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 205, 27 |
| Conread position: | 280-549 |
| Cow position: | chr3:68045853-68046122 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 282-549 |
| Cow position: | chr3:62722323-62722056 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 282-552 |
| Cow position: | chr3:68027430-68027700 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 203, 196 |
| Conread position: | 289-535 |
| Cow position: | chr3:68027521-68027765 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 205, 190 |
| Conread position: | 289-552 |
| Cow position: | chr3:68045610-68045873 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 293-550 |
| Cow position: | chr3:68027021-68027278 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 299-543 |
| Cow position: | chr3:62743032-62743271 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 338-549 |
| Cow position: | chr3:62742253-62742463 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 19 |
Show alignments to all cow chromosomes.