Cow genome map
| Conread name: | Ss1.1-rpigcb_12875.5 |
| Conread position: | 253-548 |
| Cow position: | chrX:25325697-25325403 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 262-550 |
| Cow position: | chrX:25309788-25310076 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 147, 141 |
| Conread position: | 275-542 |
| Cow position: | chrX:25324667-25324401 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 249, 5 |
| Conread position: | 275-542 |
| Cow position: | chrX:25325003-25324737 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 165, 5 |
| Conread position: | 275-543 |
| Cow position: | chrX:25324919-25324652 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 5 |
| Conread position: | 275-548 |
| Cow position: | chrX:25325759-25325487 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 141, 5 |
| Conread position: | 279-552 |
| Cow position: | chrX:13826865-13826592 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 280-536 |
| Cow position: | chrX:25310310-25310566 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-542 |
| Cow position: | chrX:13826780-13826518 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 120, 139 |
| Conread position: | 280-543 |
| Cow position: | chrX:25325587-25325324 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-548 |
| Cow position: | chrX:25325083-25324815 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 244, 239 |
| Conread position: | 280-548 |
| Cow position: | chrX:25325167-25324899 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 217, 198 |
| Conread position: | 280-548 |
| Cow position: | chrX:25325419-25325151 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-549 |
| Cow position: | chrX:25310142-25310411 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 208, 198 |
| Conread position: | 280-549 |
| Cow position: | chrX:25310226-25310495 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-549 |
| Cow position: | chrX:25324747-25324478 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 280-549 |
| Cow position: | chrX:29045176-29044907 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 208, 198 |
| Conread position: | 280-550 |
| Cow position: | chrX:25309974-25310244 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 112, 135 |
| Conread position: | 280-550 |
| Cow position: | chrX:25325251-25324981 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-550 |
| Cow position: | chrX:29045743-29045473 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 280-552 |
| Cow position: | chrX:25310058-25310330 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 293-549 |
| Cow position: | chrX:25309735-25309991 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 106, 117 |
| Conread position: | 297-548 |
| Cow position: | chrX:29045810-29045559 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 324-552 |
| Cow position: | chrX:13826904-13826676 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 87, 95 |
| Conread position: | 335-552 |
| Cow position: | chrX:25309693-25309910 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 14 |
Show alignments to all cow chromosomes.