• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rpigcb_3891.5
        

               
Conread position:
               
451-901
               

               
Cow position:
               
chr21:13727550-13728004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
454-909
               

               
Cow position:
               
chr21:30990085-30990523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
458-908
               

               
Cow position:
               
chr21:31576694-31576260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
464-842
               

               
Cow position:
               
chr21:4723677-4723294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
465-802
               

               
Cow position:
               
chr21:6058452-6058785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
465-854
               

               
Cow position:
               
chr21:30606893-30607282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
465-856
               

               
Cow position:
               
chr21:34237571-34237194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
141, 25
               

               
Conread position:
               
465-878
               

               
Cow position:
               
chr21:28626431-28626017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
465-912
               

               
Cow position:
               
chr21:21223476-21223026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
466-910
               

               
Cow position:
               
chr21:27341401-27341846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
467-779
               

               
Cow position:
               
chr21:47235-46916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 166
               

               
Conread position:
               
467-798
               

               
Cow position:
               
chr21:29978568-29978903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
467-811
               

               
Cow position:
               
chr21:26245109-26244777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
467-837
               

               
Cow position:
               
chr21:17184110-17183741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
467-854
               

               
Cow position:
               
chr21:12801552-12801941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 40
               

               
Conread position:
               
467-890
               

               
Cow position:
               
chr21:27568977-27569400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
467-904
               

               
Cow position:
               
chr21:30250011-30250458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
467-910
               

               
Cow position:
               
chr21:33350938-33350489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
467-910
               

               
Cow position:
               
chr21:37299659-37299209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
467-910
               

               
Cow position:
               
chr21:41974183-41974635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
467-912
               

               
Cow position:
               
chr21:49699843-49700295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
468-844
               

               
Cow position:
               
chr21:15611333-15610967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
468-846
               

               
Cow position:
               
chr21:47763926-47764301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
468-907
               

               
Cow position:
               
chr21:4399999-4399547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
468-908
               

               
Cow position:
               
chr21:44671938-44671499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 154
               

               
Conread position:
               
468-909
               

               
Cow position:
               
chr21:28733719-28734167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
470-764
               

               
Cow position:
               
chr21:45923464-45923751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
470-854
               

               
Cow position:
               
chr21:29001965-29002359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
472-910
               

               
Cow position:
               
chr21:33264032-33263595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
473-908
               

               
Cow position:
               
chr21:33563193-33562760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
474-600
               

               
Cow position:
               
chr21:13418048-13418176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
474-848
               

               
Cow position:
               
chr21:25286700-25286318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
474-859
               

               
Cow position:
               
chr21:25800586-25800212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
474-861
               

               
Cow position:
               
chr21:18379025-18378641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
474-871
               

               
Cow position:
               
chr21:31662654-31662246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
475-851
               

               
Cow position:
               
chr21:1591734-1591357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
475-909
               

               
Cow position:
               
chr21:27229609-27230047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
476-840
               

               
Cow position:
               
chr21:37344914-37345285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
476-845
               

               
Cow position:
               
chr21:40589297-40589671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
477-780
               

               
Cow position:
               
chr21:30222531-30222218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
477-802
               

               
Cow position:
               
chr21:957856-957521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 153
               

               
Conread position:
               
477-825
               

               
Cow position:
               
chr21:10001259-10000912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
477-850
               

               
Cow position:
               
chr21:38449265-38449645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
477-854
               

               
Cow position:
               
chr21:11644781-11645166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 30
               

               
Conread position:
               
477-860
               

               
Cow position:
               
chr21:23587065-23586673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 164
               

               
Conread position:
               
477-861
               

               
Cow position:
               
chr21:1059260-1058873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
477-886
               

               
Cow position:
               
chr21:34010212-34010622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 113
               

               
Conread position:
               
477-898
               

               
Cow position:
               
chr21:29485164-29484744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
477-900
               

               
Cow position:
               
chr21:38900958-38900527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 144
               

               
Conread position:
               
477-905
               

               
Cow position:
               
chr21:23321892-23322332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 152
               

               
Conread position:
               
477-910
               

               
Cow position:
               
chr21:641773-641328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
477-910
               

               
Cow position:
               
chr21:10264218-10263786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 156
               

               
Conread position:
               
477-910
               

               
Cow position:
               
chr21:15976818-15976385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
477-910
               

               
Cow position:
               
chr21:28924294-28923886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
477-910
               

               
Cow position:
               
chr21:44565536-44565961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
477-912
               

               
Cow position:
               
chr21:14760751-14760327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
479-912
               

               
Cow position:
               
chr21:37706233-37706676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
480-854
               

               
Cow position:
               
chr21:18828121-18828506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
481-793
               

               
Cow position:
               
chr21:12723332-12723020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
481-793
               

               
Cow position:
               
chr21:17875014-17875332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
481-820
               

               
Cow position:
               
chr21:10114156-10114492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
481-830
               

               
Cow position:
               
chr21:713122-712760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 233
               

               
Conread position:
               
481-835
               

               
Cow position:
               
chr21:27145812-27146172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
481-859
               

               
Cow position:
               
chr21:27521158-27521527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
481-894
               

               
Cow position:
               
chr21:38918378-38917978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
481-902
               

               
Cow position:
               
chr21:13089295-13089727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
481-907
               

               
Cow position:
               
chr21:9416428-9415989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
481-910
               

               
Cow position:
               
chr21:15584240-15584655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
481-910
               

               
Cow position:
               
chr21:17511957-17511523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
481-910
               

               
Cow position:
               
chr21:30231520-30231956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 19
               

               
Conread position:
               
481-910
               

               
Cow position:
               
chr21:32297338-32297758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
481-910
               

               
Cow position:
               
chr21:33982630-33983066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
481-910
               

               
Cow position:
               
chr21:42384688-42384252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
481-910
               

               
Cow position:
               
chr21:44251664-44252084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
482-846
               

               
Cow position:
               
chr21:14452414-14452041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
482-857
               

               
Cow position:
               
chr21:24759223-24758869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
482-861
               

               
Cow position:
               
chr21:2927025-2927407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
482-861
               

               
Cow position:
               
chr21:41621305-41620915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
482-866
               

               
Cow position:
               
chr21:42053100-42053475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
482-870
               

               
Cow position:
               
chr21:23535888-23535500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 150
               

               
Conread position:
               
482-901
               

               
Cow position:
               
chr21:18941654-18942076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
482-908
               

               
Cow position:
               
chr21:36795783-36795346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 146
               

               
Conread position:
               
482-910
               

               
Cow position:
               
chr21:22718604-22719036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
482-910
               

               
Cow position:
               
chr21:24296588-24297019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
483-722
               

               
Cow position:
               
chr21:47715367-47715608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
483-795
               

               
Cow position:
               
chr21:12461787-12462109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
483-847
               

               
Cow position:
               
chr21:13365521-13365151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 205
               

               
Conread position:
               
483-910
               

               
Cow position:
               
chr21:31691661-31691225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 215
               

               
Conread position:
               
483-912
               

               
Cow position:
               
chr21:44754611-44755035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
484-591
               

               
Cow position:
               
chr21:17806960-17807070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
484-666
               

               
Cow position:
               
chr21:1885613-1885802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 153
               

               
Conread position:
               
484-682
               

               
Cow position:
               
chr21:13256336-13256533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
484-736
               

               
Cow position:
               
chr21:31662181-31661927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
484-794
               

               
Cow position:
               
chr21:20153131-20152810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
484-816
               

               
Cow position:
               
chr21:10633463-10633800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
484-838
               

               
Cow position:
               
chr21:12087773-12087413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
484-848
               

               
Cow position:
               
chr21:5427115-5426755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
484-852
               

               
Cow position:
               
chr21:9353625-9353245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 214
               

               
Conread position:
               
484-854
               

               
Cow position:
               
chr21:45356011-45355639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
484-858
               

               
Cow position:
               
chr21:8206948-8206589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 153
               

               
Conread position:
               
484-860
               

               
Cow position:
               
chr21:35997349-35996970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
484-861
               

               
Cow position:
               
chr21:6051681-6051302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
484-861
               

               
Cow position:
               
chr21:33947076-33947448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
484-902
               

               
Cow position:
               
chr21:46848950-46849367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
484-906
               

               
Cow position:
               
chr21:5153797-5153365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
484-910
               

               
Cow position:
               
chr21:23478554-23478973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
484-912
               

               
Cow position:
               
chr21:9940012-9940436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
484-912
               

               
Cow position:
               
chr21:24698658-24698224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 188
               

               
Conread position:
               
484-912
               

               
Cow position:
               
chr21:47823091-47823525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 159
               

               
Conread position:
               
485-705
               

               
Cow position:
               
chr21:36371660-36371435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
485-758
               

               
Cow position:
               
chr21:41514970-41514703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
485-764
               

               
Cow position:
               
chr21:31004499-31004788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 191
               

               
Conread position:
               
485-774
               

               
Cow position:
               
chr21:11675876-11676160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 178
               

               
Conread position:
               
485-774
               

               
Cow position:
               
chr21:21181354-21181059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
485-780
               

               
Cow position:
               
chr21:6316390-6316085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
485-795
               

               
Cow position:
               
chr21:11360203-11359899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
485-800
               

               
Cow position:
               
chr21:42007285-42007603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
485-812
               

               
Cow position:
               
chr21:28244647-28244320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
485-829
               

               
Cow position:
               
chr21:21169319-21169667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
485-832
               

               
Cow position:
               
chr21:28989790-28989440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
485-832
               

               
Cow position:
               
chr21:32339563-32339912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
485-838
               

               
Cow position:
               
chr21:802140-802475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
485-848
               

               
Cow position:
               
chr21:32559188-32559545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
485-851
               

               
Cow position:
               
chr21:34565037-34565407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
485-852
               

               
Cow position:
               
chr21:23568405-23568013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 175
               

               
Conread position:
               
485-853
               

               
Cow position:
               
chr21:42135439-42135820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 222
               

               
Conread position:
               
485-854
               

               
Cow position:
               
chr21:10004709-10005083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
485-854
               

               
Cow position:
               
chr21:34740022-34739652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 195
               

               
Conread position:
               
485-855
               

               
Cow position:
               
chr21:3360838-3361212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
485-856
               

               
Cow position:
               
chr21:22861176-22860803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
485-861
               

               
Cow position:
               
chr21:33896-33517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
485-876
               

               
Cow position:
               
chr21:3818385-3817998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
35, 145
               

               
Conread position:
               
485-877
               

               
Cow position:
               
chr21:44093939-44093557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
485-878
               

               
Cow position:
               
chr21:46242063-46242462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
485-885
               

               
Cow position:
               
chr21:4276426-4276821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
485-891
               

               
Cow position:
               
chr21:4099047-4098635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 209
               

               
Conread position:
               
485-891
               

               
Cow position:
               
chr21:45970997-45971395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
485-895
               

               
Cow position:
               
chr21:45473581-45473996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
485-900
               

               
Cow position:
               
chr21:13127922-13128340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
485-902
               

               
Cow position:
               
chr21:25383203-25382750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 227
               

               
Conread position:
               
485-909
               

               
Cow position:
               
chr21:396044-395623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 151
               

               
Conread position:
               
485-909
               

               
Cow position:
               
chr21:7581728-7582160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
485-909
               

               
Cow position:
               
chr21:25764812-25764380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 158
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:643501-643081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 145
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:3585191-3585612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:4281703-4282120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:11739943-11740388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:26647839-26648260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:27863337-27863775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:28442909-28442478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:28810085-28810505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:29069149-29069584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
485-910
               

               
Cow position:
               
chr21:42540049-42540476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
485-911
               

               
Cow position:
               
chr21:23786209-23785771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
485-912
               

               
Cow position:
               
chr21:23800951-23801378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
485-912
               

               
Cow position:
               
chr21:48290881-48291288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
486-682
               

               
Cow position:
               
chr21:37718273-37718470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
486-734
               

               
Cow position:
               
chr21:2056866-2057117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
486-756
               

               
Cow position:
               
chr21:31200336-31200074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
486-764
               

               
Cow position:
               
chr21:11520892-11521154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
486-908
               

               
Cow position:
               
chr21:20160852-20160430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
486-909
               

               
Cow position:
               
chr21:6624333-6623893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
486-911
               

               
Cow position:
               
chr21:18568463-18568906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
486-912
               

               
Cow position:
               
chr21:36763237-36762795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 263
               

               
Conread position:
               
487-721
               

               
Cow position:
               
chr21:23397671-23397908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 150
               

               
Conread position:
               
487-910
               

               
Cow position:
               
chr21:42413922-42414355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
487-912
               

               
Cow position:
               
chr21:36819052-36819481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 123
               

               
Conread position:
               
488-906
               

               
Cow position:
               
chr21:23672919-23672494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
490-743
               

               
Cow position:
               
chr21:15239450-15239192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
490-760
               

               
Cow position:
               
chr21:32903983-32904258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
490-910
               

               
Cow position:
               
chr21:32237451-32237044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
491-912
               

               
Cow position:
               
chr21:15741914-15742355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 275
               

               
Conread position:
               
493-834
               

               
Cow position:
               
chr21:18790402-18790733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
493-837
               

               
Cow position:
               
chr21:37845595-37845928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
493-880
               

               
Cow position:
               
chr21:13584892-13585282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
493-902
               

               
Cow position:
               
chr21:10151969-10151547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
494-682
               

               
Cow position:
               
chr21:8184446-8184256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
494-756
               

               
Cow position:
               
chr21:49649796-49649535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
494-839
               

               
Cow position:
               
chr21:15911568-15911218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
494-851
               

               
Cow position:
               
chr21:31253701-31253341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
494-871
               

               
Cow position:
               
chr21:30592141-30592512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
494-907
               

               
Cow position:
               
chr21:46264338-46263924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
494-910
               

               
Cow position:
               
chr21:38121269-38120847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
494-912
               

               
Cow position:
               
chr21:33791214-33791620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
498-902
               

               
Cow position:
               
chr21:24865307-24864907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
500-753
               

               
Cow position:
               
chr21:22121665-22121426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
500-799
               

               
Cow position:
               
chr21:41583431-41583127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
501-781
               

               
Cow position:
               
chr21:37886564-37886286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
501-910
               

               
Cow position:
               
chr21:45915558-45915960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
502-800
               

               
Cow position:
               
chr21:33392215-33391919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
503-858
               

               
Cow position:
               
chr21:34160110-34159759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
13, 111
               

               
Conread position:
               
503-910
               

               
Cow position:
               
chr21:26097246-26097666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
508-912
               

               
Cow position:
               
chr21:6834200-6833794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
510-862
               

               
Cow position:
               
chr21:19258967-19258621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
510-907
               

               
Cow position:
               
chr21:24944746-24945150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
511-683
               

               
Cow position:
               
chr21:8420772-8420596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
511-693
               

               
Cow position:
               
chr21:39509241-39509427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
511-845
               

               
Cow position:
               
chr21:18800386-18800721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
511-849
               

               
Cow position:
               
chr21:33727311-33727653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
511-858
               

               
Cow position:
               
chr21:41579904-41579550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
20, 148
               

               
Conread position:
               
511-861
               

               
Cow position:
               
chr21:35062230-35061884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 119
               

               
Conread position:
               
513-910
               

               
Cow position:
               
chr21:36297639-36297223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
516-912
               

               
Cow position:
               
chr21:33997084-33997483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
517-682
               

               
Cow position:
               
chr21:38774331-38774159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
517-797
               

               
Cow position:
               
chr21:17638034-17637758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
517-842
               

               
Cow position:
               
chr21:9990652-9990329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
517-849
               

               
Cow position:
               
chr21:17193607-17193952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
517-854
               

               
Cow position:
               
chr21:18779834-18780167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
517-854
               

               
Cow position:
               
chr21:28955643-28955325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
517-862
               

               
Cow position:
               
chr21:3498635-3498293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
517-906
               

               
Cow position:
               
chr21:43357114-43357513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
517-910
               

               
Cow position:
               
chr21:5595788-5595408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
517-910
               

               
Cow position:
               
chr21:25127746-25127354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
517-910
               

               
Cow position:
               
chr21:39401732-39401344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
517-910
               

               
Cow position:
               
chr21:47760910-47760521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
517-912
               

               
Cow position:
               
chr21:23499687-23500079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 169
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr21:20260178-20260456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
518-797
               

               
Cow position:
               
chr21:11251010-11250725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
518-840
               

               
Cow position:
               
chr21:18842096-18842421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 122
               

               
Conread position:
               
518-885
               

               
Cow position:
               
chr21:41878610-41878245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
518-904
               

               
Cow position:
               
chr21:34654214-34653834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
518-907
               

               
Cow position:
               
chr21:44825745-44826128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
518-910
               

               
Cow position:
               
chr21:2679690-2679303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
518-910
               

               
Cow position:
               
chr21:5898261-5898651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
518-910
               

               
Cow position:
               
chr21:7673261-7672877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
13, 171
               

               
Conread position:
               
518-912
               

               
Cow position:
               
chr21:34390834-34391224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 101
               

               
Conread position:
               
519-745
               

               
Cow position:
               
chr21:21140654-21140439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
222, 82
               

               
Conread position:
               
519-820
               

               
Cow position:
               
chr21:16982014-16981720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
519-841
               

               
Cow position:
               
chr21:28191172-28190844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
519-850
               

               
Cow position:
               
chr21:3763603-3763930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
519-858
               

               
Cow position:
               
chr21:24598798-24598458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
519-862
               

               
Cow position:
               
chr21:44515404-44515069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
519-870
               

               
Cow position:
               
chr21:37282439-37282096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
519-909
               

               
Cow position:
               
chr21:37941544-37941937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
519-910
               

               
Cow position:
               
chr21:5392395-5392794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 194
               

               
Conread position:
               
520-886
               

               
Cow position:
               
chr21:27123982-27124360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 178
               

               
Conread position:
               
520-912
               

               
Cow position:
               
chr21:16166502-16166891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
521-849
               

               
Cow position:
               
chr21:47861330-47860996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
522-910
               

               
Cow position:
               
chr21:29214023-29214411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
523-910
               

               
Cow position:
               
chr21:3920076-3920468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
524-845
               

               
Cow position:
               
chr21:47729887-47730207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
525-685
               

               
Cow position:
               
chr21:11019514-11019356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
525-818
               

               
Cow position:
               
chr21:18064780-18065085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
525-912
               

               
Cow position:
               
chr21:9202310-9201934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
526-910
               

               
Cow position:
               
chr21:724752-725146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 174
               

               
Conread position:
               
527-910
               

               
Cow position:
               
chr21:28993490-28993882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
527-912
               

               
Cow position:
               
chr21:2367463-2367082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
529-801
               

               
Cow position:
               
chr21:35354660-35354393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
529-840
               

               
Cow position:
               
chr21:46144088-46143760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
529-861
               

               
Cow position:
               
chr21:24888128-24887805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
529-909
               

               
Cow position:
               
chr21:45151500-45151886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
529-910
               

               
Cow position:
               
chr21:5970709-5971092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
529-910
               

               
Cow position:
               
chr21:12154262-12153877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
529-910
               

               
Cow position:
               
chr21:39403396-39403794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 180
               

               
Conread position:
               
530-765
               

               
Cow position:
               
chr21:10673249-10673023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
530-781
               

               
Cow position:
               
chr21:20193022-20192778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
530-826
               

               
Cow position:
               
chr21:41198271-41198581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 194
               

               
Conread position:
               
530-839
               

               
Cow position:
               
chr21:13488655-13488337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
530-849
               

               
Cow position:
               
chr21:10601247-10601560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
530-852
               

               
Cow position:
               
chr21:7710290-7709970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
530-854
               

               
Cow position:
               
chr21:45330479-45330805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 75
               

               
Conread position:
               
530-858
               

               
Cow position:
               
chr21:8549809-8549480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
29, 180
               

               
Conread position:
               
530-908
               

               
Cow position:
               
chr21:17475947-17475566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
530-909
               

               
Cow position:
               
chr21:39664270-39664628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:2420627-2420249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
28, 104
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:4904839-4905223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:7564179-7564578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 197
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:13048065-13048452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:18289791-18289407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:19196036-19196424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:19766982-19766598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:22856346-22855963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:23899679-23900063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:28512642-28512285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:33729558-33729177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
530-910
               

               
Cow position:
               
chr21:46912673-46912288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
530-912
               

               
Cow position:
               
chr21:42501178-42500773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 172
               

               
Conread position:
               
531-780
               

               
Cow position:
               
chr21:18415179-18414926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
531-866
               

               
Cow position:
               
chr21:43237100-43236754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
531-906
               

               
Cow position:
               
chr21:17419417-17419793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
531-908
               

               
Cow position:
               
chr21:1814840-1815215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
531-910
               

               
Cow position:
               
chr21:24858442-24858055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
531-910
               

               
Cow position:
               
chr21:35897499-35897877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
531-911
               

               
Cow position:
               
chr21:40899466-40899081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
531-912
               

               
Cow position:
               
chr21:47767254-47767641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
532-792
               

               
Cow position:
               
chr21:17856670-17856408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
532-804
               

               
Cow position:
               
chr21:45439112-45439397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
532-908
               

               
Cow position:
               
chr21:5482881-5482497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
535-809
               

               
Cow position:
               
chr21:11456686-11456962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
535-854
               

               
Cow position:
               
chr21:18844889-18845212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
536-908
               

               
Cow position:
               
chr21:13034916-13035303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
537-910
               

               
Cow position:
               
chr21:36162838-36163219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
537-912
               

               
Cow position:
               
chr21:28997781-28998165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 151
               

               
Conread position:
               
538-910
               

               
Cow position:
               
chr21:42024240-42023879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
541-673
               

               
Cow position:
               
chr21:9400646-9400783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
542-850
               

               
Cow position:
               
chr21:10118675-10118360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
543-885
               

               
Cow position:
               
chr21:46829157-46829495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
546-775
               

               
Cow position:
               
chr21:6621211-6621442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
547-840
               

               
Cow position:
               
chr21:17175254-17174957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
552-910
               

               
Cow position:
               
chr21:28211298-28210929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
553-882
               

               
Cow position:
               
chr21:30059339-30059672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-892
               

               
Cow position:
               
chr21:17947820-17948163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:1457516-1457877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:2490685-2491046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:4472916-4473276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:4665381-4665740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:5791330-5790969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:7037758-7038119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:7596829-7597197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:13931242-13930881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:16795445-16795084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:20370800-20370439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:21624519-21624158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:25076283-25076644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:26071047-26071408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:26854258-26854619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:30135221-30134863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:30656074-30655713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:31039247-31039608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:33632344-33632705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:34956300-34955942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:35068467-35068106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
160, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:36972709-36973070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
160, 62
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:38848365-38848726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
553-910
               

               
Cow position:
               
chr21:39561702-39561341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 74
               

               
Conread position:
               
554-910
               

               
Cow position:
               
chr21:3813383-3813723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
554-910
               

               
Cow position:
               
chr21:10727376-10727025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
555-812
               

               
Cow position:
               
chr21:41590467-41590712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
556-812
               

               
Cow position:
               
chr21:41454849-41455106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
557-854
               

               
Cow position:
               
chr21:14464676-14464380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
137, 6
               

               
Conread position:
               
557-870
               

               
Cow position:
               
chr21:17936468-17936155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
157, 6
               

               
Conread position:
               
558-838
               

               
Cow position:
               
chr21:39450063-39450349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
559-910
               

               
Cow position:
               
chr21:4585266-4585605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
560-908
               

               
Cow position:
               
chr21:4093080-4092730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
560-910
               

               
Cow position:
               
chr21:3364887-3364533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
560-910
               

               
Cow position:
               
chr21:4957092-4957446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
73, 67
               

               
Conread position:
               
560-910
               

               
Cow position:
               
chr21:11293134-11292782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
560-910
               

               
Cow position:
               
chr21:33901856-33901500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
561-894
               

               
Cow position:
               
chr21:41235614-41235951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
561-908
               

               
Cow position:
               
chr21:21104146-21103794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
152, 62
               

               
Conread position:
               
561-908
               

               
Cow position:
               
chr21:23192419-23192772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:2472349-2472703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 84
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:2939126-2938773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:10074837-10075192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:11143425-11143776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:16187714-16188051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:17411415-17411763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
152, 66
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:19363366-19363706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 129
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:25480691-25480333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:34182086-34181739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
561-910
               

               
Cow position:
               
chr21:36891808-36892158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
562-803
               

               
Cow position:
               
chr21:18041755-18041989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
562-826
               

               
Cow position:
               
chr21:19936828-19937102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
562-906
               

               
Cow position:
               
chr21:4795318-4794970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
562-908
               

               
Cow position:
               
chr21:23149929-23150273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
562-909
               

               
Cow position:
               
chr21:44397-44062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
562-909
               

               
Cow position:
               
chr21:37480047-37479704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
562-910
               

               
Cow position:
               
chr21:2904386-2904718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
269, 84
               

               
Conread position:
               
562-910
               

               
Cow position:
               
chr21:27147125-27147480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
562-910
               

               
Cow position:
               
chr21:33709074-33709426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
151, 65
               

               
Conread position:
               
562-910
               

               
Cow position:
               
chr21:45867026-45866680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
562-912
               

               
Cow position:
               
chr21:20262243-20262592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
563-861
               

               
Cow position:
               
chr21:17674142-17674440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
563-867
               

               
Cow position:
               
chr21:30150172-30150478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
563-907
               

               
Cow position:
               
chr21:39888658-39888997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
563-908
               

               
Cow position:
               
chr21:6764609-6764956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
563-909
               

               
Cow position:
               
chr21:426898-426537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
563-909
               

               
Cow position:
               
chr21:11640113-11639765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
563-910
               

               
Cow position:
               
chr21:13489737-13489387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
563-910
               

               
Cow position:
               
chr21:20925412-20925761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
563-910
               

               
Cow position:
               
chr21:24222446-24222797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
563-910
               

               
Cow position:
               
chr21:25537089-25536739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
563-910
               

               
Cow position:
               
chr21:32192265-32191915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
150, 60
               

               
Conread position:
               
563-910
               

               
Cow position:
               
chr21:47802168-47802518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
564-845
               

               
Cow position:
               
chr21:6102171-6102457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
564-883
               

               
Cow position:
               
chr21:8351221-8351530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
564-890
               

               
Cow position:
               
chr21:30152748-30153078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
149, 50
               

               
Conread position:
               
564-895
               

               
Cow position:
               
chr21:9847920-9848234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
180, 46
               

               
Conread position:
               
564-910
               

               
Cow position:
               
chr21:2359980-2359636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
564-910
               

               
Cow position:
               
chr21:11227871-11228210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
564-910
               

               
Cow position:
               
chr21:20044674-20045023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
564-910
               

               
Cow position:
               
chr21:24607476-24607129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
566-861
               

               
Cow position:
               
chr21:7068140-7067840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
567-910
               

               
Cow position:
               
chr21:16612712-16612373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
567-910
               

               
Cow position:
               
chr21:28882225-28881893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
567-912
               

               
Cow position:
               
chr21:3236613-3236274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
568-910
               

               
Cow position:
               
chr21:13898274-13897937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
569-850
               

               
Cow position:
               
chr21:3047762-3047493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
571-834
               

               
Cow position:
               
chr21:49662038-49662294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
573-892
               

               
Cow position:
               
chr21:11114791-11114467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
573-908
               

               
Cow position:
               
chr21:16696448-16696116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
573-910
               

               
Cow position:
               
chr21:10070852-10071185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
573-910
               

               
Cow position:
               
chr21:17616240-17616572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
573-912
               

               
Cow position:
               
chr21:5238468-5238148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
574-902
               

               
Cow position:
               
chr21:19615254-19614925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
574-910
               

               
Cow position:
               
chr21:16910141-16909799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
574-910
               

               
Cow position:
               
chr21:42913663-42914002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
575-797
               

               
Cow position:
               
chr21:48234087-48234299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
575-876
               

               
Cow position:
               
chr21:12960819-12961117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
575-910
               

               
Cow position:
               
chr21:32574800-32574475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
576-872
               

               
Cow position:
               
chr21:32665697-32665989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
576-895
               

               
Cow position:
               
chr21:9862564-9862862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
577-781
               

               
Cow position:
               
chr21:2412840-2412636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
163, 50
               

               
Conread position:
               
577-794
               

               
Cow position:
               
chr21:39809971-39809762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
577-853
               

               
Cow position:
               
chr21:35569307-35569580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
164, 32
               

               
Conread position:
               
577-896
               

               
Cow position:
               
chr21:26614584-26614895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
577-910
               

               
Cow position:
               
chr21:27743826-27743485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
577-910
               

               
Cow position:
               
chr21:36793972-36793626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
577-912
               

               
Cow position:
               
chr21:5597229-5596902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
577-912
               

               
Cow position:
               
chr21:29943081-29942743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
578-910
               

               
Cow position:
               
chr21:9710629-9710971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
578-910
               

               
Cow position:
               
chr21:23984206-23984540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
579-895
               

               
Cow position:
               
chr21:39765920-39765611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
579-906
               

               
Cow position:
               
chr21:20426605-20426290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
582-861
               

               
Cow position:
               
chr21:34053121-34053391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
583-774
               

               
Cow position:
               
chr21:4568356-4568168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
583-858
               

               
Cow position:
               
chr21:28443302-28443580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
583-910
               

               
Cow position:
               
chr21:21480113-21480435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
586-908
               

               
Cow position:
               
chr21:911898-912218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
586-910
               

               
Cow position:
               
chr21:5344728-5344405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
105, 123
               

               
Conread position:
               
587-851
               

               
Cow position:
               
chr21:42459469-42459741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
587-910
               

               
Cow position:
               
chr21:24795973-24796290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
590-860
               

               
Cow position:
               
chr21:29247795-29248047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
197, 79
               

               
Conread position:
               
590-885
               

               
Cow position:
               
chr21:10866947-10866648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
590-910
               

               
Cow position:
               
chr21:44109067-44108753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
591-857
               

               
Cow position:
               
chr21:31676562-31676298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
591-858
               

               
Cow position:
               
chr21:9311109-9310842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
592-910
               

               
Cow position:
               
chr21:17479436-17479128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
593-856
               

               
Cow position:
               
chr21:31764068-31764335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
593-860
               

               
Cow position:
               
chr21:28944303-28944567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 45
               

               
Conread position:
               
594-910
               

               
Cow position:
               
chr21:21216081-21216397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
594-911
               

               
Cow position:
               
chr21:8289570-8289896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
597-910
               

               
Cow position:
               
chr21:26835232-26835551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
602-906
               

               
Cow position:
               
chr21:15545307-15545617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 221
               

               
Conread position:
               
602-911
               

               
Cow position:
               
chr21:23449629-23449321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
602-912
               

               
Cow position:
               
chr21:1641653-1641970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 139
               

               
Conread position:
               
604-910
               

               
Cow position:
               
chr21:82132-81814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
607-860
               

               
Cow position:
               
chr21:5426021-5425778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
607-906
               

               
Cow position:
               
chr21:42190125-42190419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
607-907
               

               
Cow position:
               
chr21:40058853-40058553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
607-910
               

               
Cow position:
               
chr21:28429487-28429194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
608-832
               

               
Cow position:
               
chr21:22194062-22194286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
609-910
               

               
Cow position:
               
chr21:394063-393765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
609-910
               

               
Cow position:
               
chr21:5021517-5021212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
610-890
               

               
Cow position:
               
chr21:37361427-37361706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
610-903
               

               
Cow position:
               
chr21:40786721-40786421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
611-910
               

               
Cow position:
               
chr21:8985590-8985293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 17
               

               
Conread position:
               
611-910
               

               
Cow position:
               
chr21:10571638-10571344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
611-910
               

               
Cow position:
               
chr21:12617181-12616886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
611-910
               

               
Cow position:
               
chr21:23822210-23821912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
611-910
               

               
Cow position:
               
chr21:41957133-41957430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
612-795
               

               
Cow position:
               
chr21:2294030-2293854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
612-850
               

               
Cow position:
               
chr21:34347051-34346814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
613-889
               

               
Cow position:
               
chr21:12973205-12973492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
613-908
               

               
Cow position:
               
chr21:1464273-1463979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
614-771
               

               
Cow position:
               
chr21:18782309-18782151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
614-854
               

               
Cow position:
               
chr21:5137443-5137687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
614-861
               

               
Cow position:
               
chr21:8618320-8618070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
614-908
               

               
Cow position:
               
chr21:43240908-43240605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
614-912
               

               
Cow position:
               
chr21:20377325-20377620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
615-908
               

               
Cow position:
               
chr21:17412259-17412546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
616-848
               

               
Cow position:
               
chr21:17302338-17302567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
616-902
               

               
Cow position:
               
chr21:42170676-42170382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 78
               

               
Conread position:
               
616-910
               

               
Cow position:
               
chr21:5454949-5455242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
75, 94
               

               
Conread position:
               
617-884
               

               
Cow position:
               
chr21:9278422-9278138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
617-910
               

               
Cow position:
               
chr21:2515209-2514918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
617-910
               

               
Cow position:
               
chr21:11759427-11759720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
617-910
               

               
Cow position:
               
chr21:13069823-13070116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
617-910
               

               
Cow position:
               
chr21:19169869-19170166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
617-910
               

               
Cow position:
               
chr21:28260037-28259741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
617-910
               

               
Cow position:
               
chr21:35822854-35823146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 12
               

               
Conread position:
               
618-910
               

               
Cow position:
               
chr21:11706709-11707006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
618-912
               

               
Cow position:
               
chr21:45841630-45841931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
619-858
               

               
Cow position:
               
chr21:41597857-41597614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
622-851
               

               
Cow position:
               
chr21:31277853-31277627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
622-894
               

               
Cow position:
               
chr21:5636684-5636961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
622-908
               

               
Cow position:
               
chr21:17714350-17714059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 6
               

               
Conread position:
               
622-910
               

               
Cow position:
               
chr21:19070550-19070845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 7
               

               
Conread position:
               
622-910
               

               
Cow position:
               
chr21:33210235-33209943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
622-912
               

               
Cow position:
               
chr21:10967265-10966975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
623-837
               

               
Cow position:
               
chr21:45375655-45375436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
623-905
               

               
Cow position:
               
chr21:42905343-42905626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 151
               

               
Conread position:
               
623-908
               

               
Cow position:
               
chr21:46973101-46973389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
120, 5
               

               
Conread position:
               
623-910
               

               
Cow position:
               
chr21:2785745-2786048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
623-910
               

               
Cow position:
               
chr21:16789755-16789465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
623-910
               

               
Cow position:
               
chr21:17145182-17144892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
623-910
               

               
Cow position:
               
chr21:28477658-28477369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
623-910
               

               
Cow position:
               
chr21:31701922-31702212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
148, 73
               

               
Conread position:
               
623-910
               

               
Cow position:
               
chr21:44123091-44122799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
623-910
               

               
Cow position:
               
chr21:48484415-48484696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
624-781
               

               
Cow position:
               
chr21:27810438-27810280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
117, 9
               

               
Conread position:
               
624-910
               

               
Cow position:
               
chr21:4998454-4998741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 72
               

               
Conread position:
               
624-910
               

               
Cow position:
               
chr21:10882471-10882170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 112
               

               
Conread position:
               
624-910
               

               
Cow position:
               
chr21:27376484-27376193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
89, 45
               

               
Conread position:
               
624-910
               

               
Cow position:
               
chr21:33933348-33933640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
625-910
               

               
Cow position:
               
chr21:23606704-23606418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
626-846
               

               
Cow position:
               
chr21:26645628-26645840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
626-910
               

               
Cow position:
               
chr21:28617619-28617346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
627-818
               

               
Cow position:
               
chr21:27624737-27624551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
627-844
               

               
Cow position:
               
chr21:4268905-4268686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
627-860
               

               
Cow position:
               
chr21:20910067-20910294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
627-869
               

               
Cow position:
               
chr21:48250998-48251242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
627-892
               

               
Cow position:
               
chr21:7132438-7132700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
627-894
               

               
Cow position:
               
chr21:1483519-1483252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
628-839
               

               
Cow position:
               
chr21:23550359-23550145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 199
               

               
Conread position:
               
628-857
               

               
Cow position:
               
chr21:42145941-42145716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
628-889
               

               
Cow position:
               
chr21:15445045-15445314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
628-902
               

               
Cow position:
               
chr21:32536003-32535730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
628-910
               

               
Cow position:
               
chr21:34738638-34738342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
628-910
               

               
Cow position:
               
chr21:40244468-40244178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
628-912
               

               
Cow position:
               
chr21:18494997-18494720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
629-809
               

               
Cow position:
               
chr21:8187478-8187666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
629-907
               

               
Cow position:
               
chr21:34659061-34658781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
631-852
               

               
Cow position:
               
chr21:9998692-9998916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
111, 157
               

               
Conread position:
               
631-910
               

               
Cow position:
               
chr21:938053-937796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
632-780
               

               
Cow position:
               
chr21:41595739-41595587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
634-808
               

               
Cow position:
               
chr21:10823589-10823402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
634-854
               

               
Cow position:
               
chr21:24765312-24765087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
634-884
               

               
Cow position:
               
chr21:17416739-17416992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
634-908
               

               
Cow position:
               
chr21:17434296-17434574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
634-908
               

               
Cow position:
               
chr21:18934941-18934669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
634-908
               

               
Cow position:
               
chr21:21967493-21967228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
634-910
               

               
Cow position:
               
chr21:18935781-18935510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
634-910
               

               
Cow position:
               
chr21:36642928-36642651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
634-912
               

               
Cow position:
               
chr21:17410635-17410913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
635-858
               

               
Cow position:
               
chr21:47066877-47067088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
635-861
               

               
Cow position:
               
chr21:24094727-24094948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
637-762
               

               
Cow position:
               
chr21:40312781-40312903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
643-861
               

               
Cow position:
               
chr21:47215168-47215385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 51
               

               
Conread position:
               
643-862
               

               
Cow position:
               
chr21:24714670-24714448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 182
               

               
Conread position:
               
643-886
               

               
Cow position:
               
chr21:42348661-42348910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
643-902
               

               
Cow position:
               
chr21:17049603-17049344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
643-909
               

               
Cow position:
               
chr21:19439473-19439208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
643-910
               

               
Cow position:
               
chr21:611755-612023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
643-912
               

               
Cow position:
               
chr21:41033293-41033023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
645-907
               

               
Cow position:
               
chr21:13703673-13703940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
646-818
               

               
Cow position:
               
chr21:6765890-6765719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
646-844
               

               
Cow position:
               
chr21:28027818-28027616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
646-860
               

               
Cow position:
               
chr21:13850055-13850273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
646-878
               

               
Cow position:
               
chr21:13303829-13303598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
646-894
               

               
Cow position:
               
chr21:13409814-13410063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
646-901
               

               
Cow position:
               
chr21:4189846-4189585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
646-907
               

               
Cow position:
               
chr21:15905835-15905569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-907
               

               
Cow position:
               
chr21:27288319-27288053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
646-909
               

               
Cow position:
               
chr21:23683558-23683295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:452219-451948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:2877497-2877768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:3987470-3987742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 188
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:4080369-4080098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 170
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:4897638-4897909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:7046840-7047113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:9209645-9209380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:10437184-10436913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:10854603-10854330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:12366392-12366131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:13734814-13735088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:18718683-18718413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:19626362-19626636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:21963492-21963222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:27336837-27336566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:28914350-28914619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:30570735-30571006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:30965598-30965868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:32395666-32395937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:33235813-33235542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:33419713-33419972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:34074982-34074711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:34910206-34909935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:36505224-36505494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:36781465-36781199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:38650911-38651177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:39485930-39486201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
646-910
               

               
Cow position:
               
chr21:39821795-39822066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
646-912
               

               
Cow position:
               
chr21:27607348-27607621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
647-904
               

               
Cow position:
               
chr21:9028635-9028372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
647-910
               

               
Cow position:
               
chr21:750750-750482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
647-910
               

               
Cow position:
               
chr21:30594733-30595007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
648-894
               

               
Cow position:
               
chr21:363658-363415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
95, 43
               

               
Conread position:
               
648-909
               

               
Cow position:
               
chr21:48263130-48262880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
648-910
               

               
Cow position:
               
chr21:42463826-42464097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
649-850
               

               
Cow position:
               
chr21:29979750-29979950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
649-910
               

               
Cow position:
               
chr21:15867316-15867059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
649-910
               

               
Cow position:
               
chr21:18783678-18783939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
650-885
               

               
Cow position:
               
chr21:21919847-21919609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
650-906
               

               
Cow position:
               
chr21:35899823-35899555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
650-907
               

               
Cow position:
               
chr21:13395558-13395303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
650-907
               

               
Cow position:
               
chr21:38867566-38867819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
650-908
               

               
Cow position:
               
chr21:26632653-26632917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-909
               

               
Cow position:
               
chr21:1178926-1179191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:48486-48219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:5641497-5641764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:13169161-13168894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:13632900-13632633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:23329001-23329268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:24237123-24236857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:26756385-26756651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:26875935-26875665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:29955231-29954964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:30688182-30688445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:32356344-32356610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:33245144-33245417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:34877267-34877533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:35919599-35919332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
650-910
               

               
Cow position:
               
chr21:45372366-45372099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
652-909
               

               
Cow position:
               
chr21:16326968-16327215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
654-910
               

               
Cow position:
               
chr21:5649910-5649650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
654-910
               

               
Cow position:
               
chr21:7716782-7717044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
656-910
               

               
Cow position:
               
chr21:25344872-25344622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
658-905
               

               
Cow position:
               
chr21:5566998-5566740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
661-850
               

               
Cow position:
               
chr21:13163886-13163700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
661-907
               

               
Cow position:
               
chr21:13763616-13763372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
665-850
               

               
Cow position:
               
chr21:9303770-9303954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 119
               

               
Conread position:
               
667-910
               

               
Cow position:
               
chr21:17642974-17643219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
668-852
               

               
Cow position:
               
chr21:42465821-42465634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
669-850
               

               
Cow position:
               
chr21:37208122-37208302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
669-910
               

               
Cow position:
               
chr21:23293172-23293411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
674-894
               

               
Cow position:
               
chr21:29014905-29015129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
677-908
               

               
Cow position:
               
chr21:4279619-4279378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
683-910
               

               
Cow position:
               
chr21:39313196-39313425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
684-910
               

               
Cow position:
               
chr21:47649639-47649412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
686-910
               

               
Cow position:
               
chr21:47745699-47745929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
687-908
               

               
Cow position:
               
chr21:30859343-30859119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
687-912
               

               
Cow position:
               
chr21:3239278-3239051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
687-912
               

               
Cow position:
               
chr21:44804288-44804518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
694-851
               

               
Cow position:
               
chr21:11082375-11082535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
695-912
               

               
Cow position:
               
chr21:41040834-41040607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
696-861
               

               
Cow position:
               
chr21:24085609-24085774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
696-897
               

               
Cow position:
               
chr21:8232775-8232971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 134
               

               
Conread position:
               
697-861
               

               
Cow position:
               
chr21:27089843-27090007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
155, 17
               

               
Conread position:
               
697-910
               

               
Cow position:
               
chr21:1991263-1991048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
697-910
               

               
Cow position:
               
chr21:44331324-44331541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 128
               

               
Conread position:
               
698-840
               

               
Cow position:
               
chr21:1511029-1510890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
698-864
               

               
Cow position:
               
chr21:35897442-35897281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 139
               

               
Conread position:
               
698-869
               

               
Cow position:
               
chr21:14168029-14167857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
698-881
               

               
Cow position:
               
chr21:16270692-16270512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
698-910
               

               
Cow position:
               
chr21:9743614-9743835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
698-910
               

               
Cow position:
               
chr21:18978887-18979111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
698-912
               

               
Cow position:
               
chr21:3614315-3614103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 35
               

               
Conread position:
               
699-812
               

               
Cow position:
               
chr21:14126008-14125890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
699-870
               

               
Cow position:
               
chr21:24797647-24797482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
699-894
               

               
Cow position:
               
chr21:22350109-22349902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
699-908
               

               
Cow position:
               
chr21:19062634-19062429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
699-910
               

               
Cow position:
               
chr21:28029361-28029141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
699-910
               

               
Cow position:
               
chr21:44280873-44281087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
699-912
               

               
Cow position:
               
chr21:26680985-26681196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
699-912
               

               
Cow position:
               
chr21:38692146-38691934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
700-902
               

               
Cow position:
               
chr21:34895169-34894963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
700-910
               

               
Cow position:
               
chr21:684440-684223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
700-910
               

               
Cow position:
               
chr21:18713240-18713030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
701-902
               

               
Cow position:
               
chr21:36712155-36711951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
701-910
               

               
Cow position:
               
chr21:10757197-10756985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
701-911
               

               
Cow position:
               
chr21:6956210-6956424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
701-912
               

               
Cow position:
               
chr21:40524502-40524710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
702-862
               

               
Cow position:
               
chr21:19436163-19436322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
702-889
               

               
Cow position:
               
chr21:28919666-28919858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
702-901
               

               
Cow position:
               
chr21:13256761-13256548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
702-909
               

               
Cow position:
               
chr21:22140383-22140592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
702-912
               

               
Cow position:
               
chr21:3174069-3173862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
702-912
               

               
Cow position:
               
chr21:13301107-13300894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
702-912
               

               
Cow position:
               
chr21:25603228-25603439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
703-897
               

               
Cow position:
               
chr21:17262162-17262359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
704-879
               

               
Cow position:
               
chr21:11877337-11877159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
704-910
               

               
Cow position:
               
chr21:37517408-37517621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
704-910
               

               
Cow position:
               
chr21:46627035-46626813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
9, 204
               

               
Conread position:
               
705-906
               

               
Cow position:
               
chr21:34011142-34011355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
705-910
               

               
Cow position:
               
chr21:8888823-8888610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
705-910
               

               
Cow position:
               
chr21:30566975-30566763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
8, 108
               

               
Conread position:
               
705-910
               

               
Cow position:
               
chr21:31278731-31278526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
705-912
               

               
Cow position:
               
chr21:20162491-20162277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
706-892
               

               
Cow position:
               
chr21:28907695-28907890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
706-910
               

               
Cow position:
               
chr21:20548959-20549174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
706-910
               

               
Cow position:
               
chr21:24131032-24130825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
706-910
               

               
Cow position:
               
chr21:25281843-25282043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
706-910
               

               
Cow position:
               
chr21:33993107-33993322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
706-910
               

               
Cow position:
               
chr21:39061805-39061593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
707-850
               

               
Cow position:
               
chr21:9334311-9334452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
707-858
               

               
Cow position:
               
chr21:46132027-46132179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
707-871
               

               
Cow position:
               
chr21:32205872-32205706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
707-902
               

               
Cow position:
               
chr21:4267395-4267598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
707-902
               

               
Cow position:
               
chr21:13316334-13316142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
707-906
               

               
Cow position:
               
chr21:42940181-42939974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
707-906
               

               
Cow position:
               
chr21:46037285-46037488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
707-907
               

               
Cow position:
               
chr21:1529281-1529481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
707-908
               

               
Cow position:
               
chr21:17369929-17370137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
707-909
               

               
Cow position:
               
chr21:21600705-21600915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:150427-150220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:1196822-1196611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:3783055-3782844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:3819060-3818852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:7791098-7791296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:8420602-8420409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:14762552-14762765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:17282654-17282447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:19668449-19668648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:24136872-24136662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:25193749-25193539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:26399500-26399711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:31159212-31158999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 200
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:34251586-34251789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
158, 24
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:37297372-37297568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:37874473-37874262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:39700121-39700332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:40266879-40267084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
707-910
               

               
Cow position:
               
chr21:42559048-42558848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
707-912
               

               
Cow position:
               
chr21:5459455-5459654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
153, 29
               

               
Conread position:
               
707-912
               

               
Cow position:
               
chr21:14384185-14383978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
162, 34
               

               
Conread position:
               
707-912
               

               
Cow position:
               
chr21:21169991-21170200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
707-912
               

               
Cow position:
               
chr21:30355125-30354914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
155, 199
               

               
Conread position:
               
708-831
               

               
Cow position:
               
chr21:11173921-11173793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
708-840
               

               
Cow position:
               
chr21:7391481-7391611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
708-854
               

               
Cow position:
               
chr21:21000080-21000223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
708-871
               

               
Cow position:
               
chr21:8974174-8974006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
708-894
               

               
Cow position:
               
chr21:21975332-21975134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
708-901
               

               
Cow position:
               
chr21:17433302-17433498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
708-901
               

               
Cow position:
               
chr21:24348618-24348417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-906
               

               
Cow position:
               
chr21:25183836-25184041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-907
               

               
Cow position:
               
chr21:13110843-13111050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
708-908
               

               
Cow position:
               
chr21:1781305-1781098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
708-908
               

               
Cow position:
               
chr21:6366554-6366356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
708-908
               

               
Cow position:
               
chr21:17452066-17452268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
708-909
               

               
Cow position:
               
chr21:4428632-4428433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
708-909
               

               
Cow position:
               
chr21:21785133-21785342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
708-909
               

               
Cow position:
               
chr21:21964971-21964775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
708-909
               

               
Cow position:
               
chr21:36657520-36657325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:661653-661863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:697038-697241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:2709606-2709816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:4732266-4732473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:4811783-4811989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:5857183-5857392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:7525401-7525191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:11510220-11510010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:13954467-13954255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:16575163-16575373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:17539688-17539478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:18574798-18574588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:19501979-19501769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:19614527-19614317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:21910309-21910099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:22099916-22100126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:25173824-25173614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:25598947-25598738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:26241775-26241572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:27036732-27036522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:28599726-28599514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
34, 200
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:29500860-29500650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:30626232-30626439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:30650573-30650783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:33770961-33770751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:34899400-34899610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:34900959-34900749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:36225701-36225491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:36857577-36857374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:39429902-39429692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:40479545-40479335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:41795440-41795650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:43402040-43402246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:46777025-46777229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
708-910
               

               
Cow position:
               
chr21:48458914-48459124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
708-912
               

               
Cow position:
               
chr21:5418811-5418592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
708-912
               

               
Cow position:
               
chr21:26853211-26852998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
708-912
               

               
Cow position:
               
chr21:26870830-26870616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
709-849
               

               
Cow position:
               
chr21:49145150-49145291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
709-861
               

               
Cow position:
               
chr21:4775132-4774978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
709-909
               

               
Cow position:
               
chr21:30313856-30313660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
709-910
               

               
Cow position:
               
chr21:2495221-2495427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
709-910
               

               
Cow position:
               
chr21:32447495-32447286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
709-910
               

               
Cow position:
               
chr21:39224665-39224874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
709-912
               

               
Cow position:
               
chr21:17218666-17218871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
710-858
               

               
Cow position:
               
chr21:48107915-48108068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
710-910
               

               
Cow position:
               
chr21:34254334-34254536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
712-906
               

               
Cow position:
               
chr21:30904657-30904853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
712-910
               

               
Cow position:
               
chr21:5808481-5808677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
712-912
               

               
Cow position:
               
chr21:5009233-5009435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
713-910
               

               
Cow position:
               
chr21:11196081-11195875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
714-910
               

               
Cow position:
               
chr21:29954493-29954683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
715-895
               

               
Cow position:
               
chr21:32828952-32829137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
716-910
               

               
Cow position:
               
chr21:31948839-31948636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
716-910
               

               
Cow position:
               
chr21:31950690-31950487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
717-906
               

               
Cow position:
               
chr21:13250395-13250589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
717-910
               

               
Cow position:
               
chr21:703221-703422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
717-910
               

               
Cow position:
               
chr21:40265773-40265577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
719-910
               

               
Cow position:
               
chr21:2870773-2870972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
721-910
               

               
Cow position:
               
chr21:25158831-25158637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
722-910
               

               
Cow position:
               
chr21:8546272-8546473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
722-912
               

               
Cow position:
               
chr21:12466291-12466098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
723-908
               

               
Cow position:
               
chr21:45263087-45263276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
723-910
               

               
Cow position:
               
chr21:20588964-20588775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
724-910
               

               
Cow position:
               
chr21:12339105-12338917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
724-910
               

               
Cow position:
               
chr21:34050220-34050407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
724-910
               

               
Cow position:
               
chr21:34685282-34685094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 7
               

               
Conread position:
               
725-860
               

               
Cow position:
               
chr21:39069234-39069370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
728-910
               

               
Cow position:
               
chr21:4035063-4035249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
728-912
               

               
Cow position:
               
chr21:37122119-37122311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
729-873
               

               
Cow position:
               
chr21:12075426-12075569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
729-889
               

               
Cow position:
               
chr21:30257776-30257939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
731-910
               

               
Cow position:
               
chr21:5841098-5840916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 98
               

               
Conread position:
               
731-910
               

               
Cow position:
               
chr21:7814786-7814967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
731-910
               

               
Cow position:
               
chr21:22857103-22856923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 166
               

               
Conread position:
               
731-912
               

               
Cow position:
               
chr21:31436273-31436088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
734-907
               

               
Cow position:
               
chr21:34511313-34511494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
735-910
               

               
Cow position:
               
chr21:40530383-40530558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
736-910
               

               
Cow position:
               
chr21:17208412-17208239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
736-910
               

               
Cow position:
               
chr21:19702443-19702268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
740-910
               

               
Cow position:
               
chr21:10032272-10032101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
740-910
               

               
Cow position:
               
chr21:27500710-27500539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
741-910
               

               
Cow position:
               
chr21:36909743-36909565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
743-910
               

               
Cow position:
               
chr21:25042403-25042233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
759-909
               

               
Cow position:
               
chr21:48637848-48638001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
763-910
               

               
Cow position:
               
chr21:27406317-27406460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
766-866
               

               
Cow position:
               
chr21:9359597-9359496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
766-910
               

               
Cow position:
               
chr21:29225171-29225315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
771-910
               

               
Cow position:
               
chr21:33580073-33579934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
773-910
               

               
Cow position:
               
chr21:45929-45790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
773-910
               

               
Cow position:
               
chr21:2657472-2657335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
778-912
               

               
Cow position:
               
chr21:27712553-27712694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
784-910
               

               
Cow position:
               
chr21:18155886-18155757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
784-912
               

               
Cow position:
               
chr21:8274316-8274440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
795-910
               

               
Cow position:
               
chr21:1765340-1765456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
812-912
               

               
Cow position:
               
chr21:29840008-29839908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 16
               
Show alignments to all cow chromosomes.