Cow genome map
| Conread name: | Ss1.1-rpigcb_5487.5 |
| Conread position: | 1-134 |
| Cow position: | chr12:9229690-9229564 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1-135 |
| Cow position: | chr12:45814473-45814335 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-140 |
| Cow position: | chr12:26869007-26868866 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-141 |
| Cow position: | chr12:12017668-12017807 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 1-153 |
| Cow position: | chr12:3076831-3076675 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-153 |
| Cow position: | chr12:25444709-25444866 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 1-178 |
| Cow position: | chr12:3994741-3994918 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 148 |
| Conread position: | 1-180 |
| Cow position: | chr12:6164237-6164060 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 159 |
| Conread position: | 1-180 |
| Cow position: | chr12:17702441-17702264 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 1-192 |
| Cow position: | chr12:18937179-18937380 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 173 |
| Conread position: | 1-192 |
| Cow position: | chr12:25455906-25456093 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 121 |
| Conread position: | 1-192 |
| Cow position: | chr12:25820641-25820456 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 1-192 |
| Cow position: | chr12:28650744-28650931 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 1-192 |
| Cow position: | chr12:41214530-41214347 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 1-196 |
| Cow position: | chr12:2286373-2286561 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 1-197 |
| Cow position: | chr12:47803947-47804136 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-200 |
| Cow position: | chr12:32169328-32169523 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 1-203 |
| Cow position: | chr12:19691444-19691246 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-203 |
| Cow position: | chr12:30170459-30170654 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 1-203 |
| Cow position: | chr12:30476269-30476467 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 13, 138 |
| Conread position: | 1-203 |
| Cow position: | chr12:34007091-34007292 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 1-203 |
| Cow position: | chr12:38454705-38454894 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 1-204 |
| Cow position: | chr12:26782673-26782870 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 1-205 |
| Cow position: | chr12:941424-941627 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 147 |
| Conread position: | 1-205 |
| Cow position: | chr12:3510355-3510547 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 120 |
| Conread position: | 1-205 |
| Cow position: | chr12:3906260-3906461 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 1-205 |
| Cow position: | chr12:6241101-6241306 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 1-205 |
| Cow position: | chr12:18421135-18420935 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 1-205 |
| Cow position: | chr12:19508780-19508572 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 1-205 |
| Cow position: | chr12:28748726-28748929 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 1-205 |
| Cow position: | chr12:33851147-33851348 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 1-205 |
| Cow position: | chr12:41580904-41581101 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 143 |
| Conread position: | 1-209 |
| Cow position: | chr12:18766189-18765982 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 1-210 |
| Cow position: | chr12:5800822-5801032 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 1-210 |
| Cow position: | chr12:8943429-8943232 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 1-211 |
| Cow position: | chr12:5635656-5635460 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 1-211 |
| Cow position: | chr12:9914578-9914782 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 1-211 |
| Cow position: | chr12:22881839-22882049 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 1-211 |
| Cow position: | chr12:24107750-24107552 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 1-211 |
| Cow position: | chr12:24577462-24577258 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 1-211 |
| Cow position: | chr12:27803258-27803057 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 1-211 |
| Cow position: | chr12:30210270-30210476 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 1-211 |
| Cow position: | chr12:35771240-35771028 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 1-211 |
| Cow position: | chr12:42181349-42181136 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 1-211 |
| Cow position: | chr12:44596022-44595817 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 1-212 |
| Cow position: | chr12:27563045-27562834 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 1-215 |
| Cow position: | chr12:5658284-5658080 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 19, 142 |
| Conread position: | 1-219 |
| Cow position: | chr12:13996243-13996022 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 127 |
| Conread position: | 1-222 |
| Cow position: | chr12:20326562-20326779 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 2-211 |
| Cow position: | chr12:25452655-25452454 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 2-211 |
| Cow position: | chr12:27563594-27563384 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 2-215 |
| Cow position: | chr12:42254451-42254664 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 150 |
| Conread position: | 3-125 |
| Cow position: | chr12:3880462-3880339 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-138 |
| Cow position: | chr12:40270302-40270166 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 3-139 |
| Cow position: | chr12:31841231-31841369 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-140 |
| Cow position: | chr12:2805255-2805120 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 3-183 |
| Cow position: | chr12:17031405-17031581 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 130 |
| Conread position: | 3-192 |
| Cow position: | chr12:4182901-4182717 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 131 |
| Conread position: | 3-192 |
| Cow position: | chr12:18021387-18021566 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 3-200 |
| Cow position: | chr12:29995667-29995480 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 3-203 |
| Cow position: | chr12:24032796-24032990 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 3-205 |
| Cow position: | chr12:8869086-8868888 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 3-205 |
| Cow position: | chr12:42283044-42282852 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 139 |
| Conread position: | 3-208 |
| Cow position: | chr12:15938482-15938273 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 3-209 |
| Cow position: | chr12:4162577-4162372 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 16, 88 |
| Conread position: | 3-211 |
| Cow position: | chr12:5905847-5906049 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 3-211 |
| Cow position: | chr12:6210367-6210165 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 3-211 |
| Cow position: | chr12:18518456-18518666 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 3-211 |
| Cow position: | chr12:29969370-29969572 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 3-211 |
| Cow position: | chr12:31429776-31429578 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-211 |
| Cow position: | chr12:33323705-33323503 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 3-211 |
| Cow position: | chr12:34466217-34466011 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 3-211 |
| Cow position: | chr12:36501158-36500955 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 3-211 |
| Cow position: | chr12:40910496-40910296 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 3-215 |
| Cow position: | chr12:1246095-1246296 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 4-152 |
| Cow position: | chr12:18076325-18076474 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 4-181 |
| Cow position: | chr12:46143612-46143785 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 4-189 |
| Cow position: | chr12:32391636-32391819 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 4-197 |
| Cow position: | chr12:38512051-38511857 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 140 |
| Conread position: | 4-200 |
| Cow position: | chr12:28471430-28471621 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 4-202 |
| Cow position: | chr12:36544858-36544657 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 4-203 |
| Cow position: | chr12:42966791-42966985 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 4-205 |
| Cow position: | chr12:28213309-28213497 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 4-205 |
| Cow position: | chr12:30662158-30661963 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 4-205 |
| Cow position: | chr12:34385722-34385520 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 4-207 |
| Cow position: | chr12:19869262-19869454 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 4-210 |
| Cow position: | chr12:4768719-4768918 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 4-210 |
| Cow position: | chr12:23574561-23574755 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 4-211 |
| Cow position: | chr12:5714419-5714623 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 136 |
| Conread position: | 4-211 |
| Cow position: | chr12:12031043-12030835 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 160 |
| Conread position: | 4-211 |
| Cow position: | chr12:15162941-15163132 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 4-211 |
| Cow position: | chr12:29770782-29770579 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 4-211 |
| Cow position: | chr12:31228365-31228565 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 4-211 |
| Cow position: | chr12:31947914-31948108 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 4-211 |
| Cow position: | chr12:35368434-35368635 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 4-211 |
| Cow position: | chr12:44517945-44517745 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 5-137 |
| Cow position: | chr12:13156470-13156601 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 5-178 |
| Cow position: | chr12:6121146-6121323 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 134 |
| Conread position: | 5-204 |
| Cow position: | chr12:2711284-2711484 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 139 |
| Conread position: | 5-205 |
| Cow position: | chr12:22515944-22515745 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 5-211 |
| Cow position: | chr12:1030776-1030973 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 5-211 |
| Cow position: | chr12:7977834-7978033 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 6-129 |
| Cow position: | chr12:4134463-4134588 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 6-180 |
| Cow position: | chr12:34673547-34673378 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 9-197 |
| Cow position: | chr12:24211216-24211392 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 9-205 |
| Cow position: | chr12:3950551-3950358 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 11, 103 |
| Conread position: | 9-205 |
| Cow position: | chr12:30753518-30753707 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 9-211 |
| Cow position: | chr12:17881658-17881854 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 113 |
| Conread position: | 9-211 |
| Cow position: | chr12:30805650-30805846 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 7, 133 |
| Conread position: | 10-205 |
| Cow position: | chr12:33457942-33458136 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 130 |
| Conread position: | 13-211 |
| Cow position: | chr12:7000805-7000610 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 136 |
| Conread position: | 14-211 |
| Cow position: | chr12:19664730-19664539 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 16-211 |
| Cow position: | chr12:19715231-19715043 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 16-211 |
| Cow position: | chr12:23797912-23798094 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 17-118 |
| Cow position: | chr12:32334203-32334101 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 17-129 |
| Cow position: | chr12:31882153-31882264 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 17-140 |
| Cow position: | chr12:22261019-22260895 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 17-181 |
| Cow position: | chr12:6226844-6226689 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 17-203 |
| Cow position: | chr12:5638948-5639131 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 89 |
| Conread position: | 17-204 |
| Cow position: | chr12:11583202-11583376 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 17-205 |
| Cow position: | chr12:2670068-2670253 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 131 |
| Conread position: | 17-205 |
| Cow position: | chr12:35780118-35779938 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 17-207 |
| Cow position: | chr12:3039304-3039500 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 14, 135 |
| Conread position: | 17-211 |
| Cow position: | chr12:11836038-11836227 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 17-211 |
| Cow position: | chr12:18964122-18963935 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 18-187 |
| Cow position: | chr12:37732978-37732812 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 18-190 |
| Cow position: | chr12:30227422-30227256 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 44, 78 |
| Conread position: | 18-205 |
| Cow position: | chr12:33976009-33976186 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 18-205 |
| Cow position: | chr12:43582574-43582762 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 18-210 |
| Cow position: | chr12:31532600-31532408 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 124, 31 |
| Conread position: | 18-211 |
| Cow position: | chr12:6410926-6410742 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 18-211 |
| Cow position: | chr12:30438051-30438233 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 21-211 |
| Cow position: | chr12:11587576-11587767 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 22-181 |
| Cow position: | chr12:7191452-7191299 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 43, 55 |
| Conread position: | 22-205 |
| Cow position: | chr12:28582692-28582517 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 26-211 |
| Cow position: | chr12:23855649-23855832 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 29-205 |
| Cow position: | chr12:25320739-25320905 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 29-211 |
| Cow position: | chr12:10491089-10491265 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 29-211 |
| Cow position: | chr12:30919237-30919418 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 29-211 |
| Cow position: | chr12:40028943-40028761 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 121 |
| Conread position: | 32-211 |
| Cow position: | chr12:38774420-38774250 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 107 |
| Conread position: | 33-211 |
| Cow position: | chr12:12637367-12637190 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 119 |
| Conread position: | 34-211 |
| Cow position: | chr12:29921960-29921792 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 35-205 |
| Cow position: | chr12:23916665-23916833 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 126 |
| Conread position: | 35-211 |
| Cow position: | chr12:4719768-4719940 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 40-211 |
| Cow position: | chr12:3623522-3623687 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 41-199 |
| Cow position: | chr12:25340342-25340501 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 41-211 |
| Cow position: | chr12:27365755-27365921 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 42-211 |
| Cow position: | chr12:44919864-44920028 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 43-192 |
| Cow position: | chr12:20354800-20354950 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 44-204 |
| Cow position: | chr12:18420302-18420458 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 46-211 |
| Cow position: | chr12:15050784-15050623 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 50-205 |
| Cow position: | chr12:41216046-41215894 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 57-211 |
| Cow position: | chr12:19258125-19258273 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 60-210 |
| Cow position: | chr12:26217978-26217832 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 126, 79 |
| Conread position: | 65-211 |
| Cow position: | chr12:18943805-18943665 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 68-211 |
| Cow position: | chr12:7110056-7110190 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.