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Cow genome map

           
Conread name:
           
Ss1.1-rpigcb_5487.5
        

               
Conread position:
               
1-118
               

               
Cow position:
               
chr18:39115346-39115227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr18:5487044-5487178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr18:11183739-11183875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr18:29058700-29058564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr18:247889-247751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr18:29356832-29356695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr18:43564025-43564162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr18:30341382-30341239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr18:54056356-54056492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr18:21768425-21768576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr18:52637730-52637573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:20864781-20864937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr18:42479794-42479617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr18:18868541-18868722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 152
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr18:23766619-23766443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr18:26586866-26586689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr18:37382300-37382120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr18:53962481-53962660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 161
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr18:4316104-4316284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr18:2270706-2270523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr18:35582304-35582118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr18:1582485-1582290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr18:47868253-47868445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr18:11680518-11680711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr18:52632606-52632420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr18:11691614-11691418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr18:42966652-42966856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr18:47314496-47314288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:4666415-4666217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:7947178-7947382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:36184107-36183913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:42747387-42747584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:48453491-48453680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:51392848-51392649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:9365710-9365912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:44262420-44262624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr18:51656255-51656046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr18:51712911-51712706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:2480448-2480653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:7487054-7487247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:45104647-45104444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:1144397-1144185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:3211666-3211876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
56, 162
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:4182394-4182189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:11377159-11377363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:13359858-13360052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:14048508-14048707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:16417899-16417708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:20482076-20481884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:33007854-33008061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
20, 132
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:35636552-35636348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:39434621-39434824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:43065307-43065528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:51691670-51691464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:55498860-55499070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
2-138
               

               
Cow position:
               
chr18:7415230-7415094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
2-139
               

               
Cow position:
               
chr18:26286711-26286843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr18:37023758-37023559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr18:18962042-18961837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr18:19273306-19273098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
3-129
               

               
Cow position:
               
chr18:55552765-55552895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
3-140
               

               
Cow position:
               
chr18:19159175-19159038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
3-149
               

               
Cow position:
               
chr18:11233227-11233373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr18:33793499-33793666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr18:16847490-16847670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr18:19849960-19849767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr18:35537439-35537240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr18:10322600-10322798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr18:21205157-21205356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr18:25984773-25984578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr18:56150854-56150647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:2592373-2592166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:6610066-6609860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:11322392-11322594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:11867138-11867335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:17005050-17005258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:22214277-22214486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:22411817-22411613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:31672716-31672514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:32773678-32773877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:38344599-38344804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 150
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr18:56159255-56159460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
4-130
               

               
Cow position:
               
chr18:28924035-28923914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-136
               

               
Cow position:
               
chr18:23447285-23447151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
4-137
               

               
Cow position:
               
chr18:12023836-12023704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
4-138
               

               
Cow position:
               
chr18:23808076-23807941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
4-140
               

               
Cow position:
               
chr18:36445235-36445373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr18:3115256-3115409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
4-179
               

               
Cow position:
               
chr18:48290641-48290473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr18:35076182-35076361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr18:55397101-55397285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr18:11166776-11166960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr18:7059027-7059205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
181, 79
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr18:14085258-14085448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr18:8105147-8104955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr18:43283961-43283769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr18:43020593-43020411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr18:219129-219332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 144
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr18:10656242-10656430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr18:22121085-22120893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr18:25282756-25282561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr18:29371665-29371859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr18:33157618-33157811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr18:36458731-36458926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr18:601377-601179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:2864202-2863992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 162
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:3158806-3158599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:3209511-3209724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:4496091-4495888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:7108922-7109128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:29796627-29796430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:36097998-36098210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:40759012-40759205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:50382055-50382246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr18:42455228-42455013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr18:52635287-52635072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr18:55806833-55806637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr18:5995266-5995480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr18:18919156-18918966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
9-200
               

               
Cow position:
               
chr18:24946007-24945818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 97
               

               
Conread position:
               
9-203
               

               
Cow position:
               
chr18:56181657-56181471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr18:4648942-4648750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
7, 99
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr18:32883108-32883305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 142
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr18:51756897-51757092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr18:7955949-7956140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
14-204
               

               
Cow position:
               
chr18:268008-267824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
16-204
               

               
Cow position:
               
chr18:16050086-16049904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
16-205
               

               
Cow position:
               
chr18:56165798-56165974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
17-129
               

               
Cow position:
               
chr18:5647057-5647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
17-140
               

               
Cow position:
               
chr18:18815866-18815739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chr18:28101442-28101602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 112
               

               
Conread position:
               
17-189
               

               
Cow position:
               
chr18:28823158-28822993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 126
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr18:13507925-13507749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr18:33606439-33606621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr18:5072600-5072418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr18:21175997-21176181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 126
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr18:27637021-27637204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr18:39001992-39001811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr18:47812280-47812463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr18:5766226-5766411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr18:18369552-18369363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr18:19896645-19896453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr18:20127292-20127107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr18:27109486-27109294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr18:51406097-51405908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr18:26355219-26355027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
17-221
               

               
Cow position:
               
chr18:20174319-20174120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
18-189
               

               
Cow position:
               
chr18:47517401-47517240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
18-200
               

               
Cow position:
               
chr18:15340636-15340457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 122
               

               
Conread position:
               
18-200
               

               
Cow position:
               
chr18:16686525-16686348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr18:39662590-39662777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr18:48828970-48828776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 130
               

               
Conread position:
               
20-205
               

               
Cow position:
               
chr18:14815525-14815350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
22-204
               

               
Cow position:
               
chr18:1585302-1585122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
23-204
               

               
Cow position:
               
chr18:21102957-21102781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr18:55747505-55747696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
29-203
               

               
Cow position:
               
chr18:7970190-7970362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr18:10861615-10861437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
29-211
               

               
Cow position:
               
chr18:43555702-43555526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
32-205
               

               
Cow position:
               
chr18:56191146-56190969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
33-211
               

               
Cow position:
               
chr18:19193539-19193367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
34-203
               

               
Cow position:
               
chr18:24022200-24022378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
41-200
               

               
Cow position:
               
chr18:38607058-38607214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
41-205
               

               
Cow position:
               
chr18:30586385-30586229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
42-205
               

               
Cow position:
               
chr18:4952373-4952214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
42-211
               

               
Cow position:
               
chr18:5632101-5632266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
42-211
               

               
Cow position:
               
chr18:43950659-43950824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
44-190
               

               
Cow position:
               
chr18:47124544-47124680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
44-211
               

               
Cow position:
               
chr18:4556331-4556168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
48-211
               

               
Cow position:
               
chr18:10214353-10214193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
50-211
               

               
Cow position:
               
chr18:52854893-52855053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
51-181
               

               
Cow position:
               
chr18:52382544-52382672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
91, 110
               

               
Conread position:
               
51-204
               

               
Cow position:
               
chr18:12273502-12273649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
51-205
               

               
Cow position:
               
chr18:19687864-19688016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
51-205
               

               
Cow position:
               
chr18:44026968-44027113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
51-211
               

               
Cow position:
               
chr18:16997096-16997252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
55-205
               

               
Cow position:
               
chr18:51643517-51643373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
60-200
               

               
Cow position:
               
chr18:36297170-36297026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 99
               

               
Conread position:
               
60-205
               

               
Cow position:
               
chr18:22274982-22274845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
65-208
               

               
Cow position:
               
chr18:48242048-48242193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               
Show alignments to all cow chromosomes.