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Cow genome map

           
Conread name:
           
Ss1.1-rpigcb_5487.5
        

               
Conread position:
               
1-132
               

               
Cow position:
               
chr19:34911703-34911834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr19:20661597-20661458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr19:23244701-23244567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr19:29627560-29627407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr19:31762843-31763013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr19:2138286-2138117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr19:2349438-2349254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr19:38596434-38596619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr19:42726176-42726361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:4329228-4329043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr19:12154667-12154858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr19:33823131-33823327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
5, 157
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:21198946-21199148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 138
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:36059751-36059947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:39360958-39361157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr19:48960209-48960407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr19:1153036-1153227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr19:8496482-8496286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr19:12747961-12747762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
21, 133
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr19:18786505-18786309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr19:29625723-29625917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr19:36125403-36125597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr19:55952338-55952140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr19:25851669-25851475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr19:25852013-25851819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr19:25865105-25864911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:729920-729728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:11191803-11191602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:14592869-14593070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:21335797-21335591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 141
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:22154042-22153831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
17, 108
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:25652943-25652742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:28014296-28014493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:33290301-33290498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:33912814-33912610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 148
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:43440982-43441183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr19:47118680-47118482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr19:35762437-35762236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr19:38392617-38392820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr19:13316593-13316399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr19:53840335-53840539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr19:55957761-55957552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:43664-43863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:6688186-6687979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:10545890-10545684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:12712061-12711855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:14253453-14253652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:18750261-18750055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:20935572-20935774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:22799264-22799057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:23222454-23222653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:24137077-24137283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 172
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:31846724-31846530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:32450897-32451105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:33116412-33116617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:42205750-42205946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:42694807-42695016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:51285446-51285660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 158
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:51401189-51400990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr19:55590052-55590252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr19:2734273-2734471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr19:36097040-36097242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr19:25673700-25673499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr19:8212018-8211811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr19:2589325-2589536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr19:52675289-52675077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 132
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr19:8270788-8270568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr19:23403825-23403612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr19:17795715-17795869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr19:25769481-25769686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr19:30886213-30886416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
3-136
               

               
Cow position:
               
chr19:22765438-22765574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr19:24760064-24759873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr19:37647018-37646826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr19:32457463-32457654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr19:15887505-15887306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr19:32754339-32754541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr19:14993106-14992909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 138
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr19:44489912-44490113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr19:6079542-6079338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr19:8839424-8839627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr19:10242405-10242603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr19:19919641-19919441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr19:30471525-30471334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr19:55394723-55394921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr19:40051574-40051362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
4-140
               

               
Cow position:
               
chr19:46180996-46180861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
4-151
               

               
Cow position:
               
chr19:47671570-47671715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr19:13129693-13129865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-189
               

               
Cow position:
               
chr19:14347830-14348015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 158
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr19:23304676-23304489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr19:33932324-33932147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr19:41518093-41517895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr19:55724881-55724698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr19:4448351-4448550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 164
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr19:38340158-38339973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr19:39576752-39576560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 129
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr19:34001027-34001216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr19:11376587-11376390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr19:33468842-33469034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:7637417-7637221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:10171819-10172019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 159
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:10173298-10173098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:15442584-15442775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:15863220-15863033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:16694227-16694017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:31595117-31595315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:34166182-34166385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:34425401-34425596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr19:43058354-43058548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr19:36380063-36380269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr19:43035060-43035258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr19:1664372-1664171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr19:6531709-6531907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr19:8864567-8864769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr19:22134327-22134129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr19:34620210-34620008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr19:36722142-36722332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr19:36845066-36845270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr19:46918664-46918870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr19:43291866-43292075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr19:56063616-56063397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr19:4445802-4445589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
5-140
               

               
Cow position:
               
chr19:32955706-32955843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr19:23786012-23786206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr19:6516079-6516282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 164
               

               
Conread position:
               
7-205
               

               
Cow position:
               
chr19:40449837-40450033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 152
               

               
Conread position:
               
9-179
               

               
Cow position:
               
chr19:19561333-19561504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr19:25271593-25271400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr19:38111297-38111484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr19:7884406-7884599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr19:10080892-10081095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr19:32506291-32506097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
16-205
               

               
Cow position:
               
chr19:31535960-31536141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
16-211
               

               
Cow position:
               
chr19:31873943-31874141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
16-221
               

               
Cow position:
               
chr19:39622973-39622757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
17-139
               

               
Cow position:
               
chr19:10093124-10093248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
17-139
               

               
Cow position:
               
chr19:21065598-21065724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
17-141
               

               
Cow position:
               
chr19:42070111-42069990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chr19:17273897-17273742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
17-189
               

               
Cow position:
               
chr19:2041690-2041868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
17-190
               

               
Cow position:
               
chr19:1552063-1552233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chr19:6417427-6417598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
17-192
               

               
Cow position:
               
chr19:39587693-39587524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr19:43431490-43431318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr19:3246218-3246037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr19:4722203-4722006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
17-204
               

               
Cow position:
               
chr19:21378637-21378456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
137, 99
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr19:47109871-47110055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr19:47727740-47727559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr19:51185259-51185443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr19:11424481-11424295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr19:11442813-11443009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr19:14928821-14928636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr19:25526117-25526304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr19:35380717-35380532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr19:53372064-53371878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
18-120
               

               
Cow position:
               
chr19:38637973-38637870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
18-181
               

               
Cow position:
               
chr19:42746503-42746347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr19:10232579-10232389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr19:22450104-22449906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr19:31825180-31824990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr19:47859482-47859295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr19:50562507-50562701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
19-140
               

               
Cow position:
               
chr19:48409345-48409466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-205
               

               
Cow position:
               
chr19:3216852-3217029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
21-161
               

               
Cow position:
               
chr19:25131448-25131590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
21-211
               

               
Cow position:
               
chr19:21816798-21816987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
22-210
               

               
Cow position:
               
chr19:25807465-25807281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
24-223
               

               
Cow position:
               
chr19:52215007-52215193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr19:43203149-43202969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr19:50682599-50682422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
26-211
               

               
Cow position:
               
chr19:46094798-46094616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chr19:7404537-7404356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chr19:46822302-46822476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
29-190
               

               
Cow position:
               
chr19:1898394-1898238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr19:9408528-9408701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr19:44757769-44757601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
32-197
               

               
Cow position:
               
chr19:990572-990405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
121, 88
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr19:5913109-5912955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
34-205
               

               
Cow position:
               
chr19:35622208-35622372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
34-211
               

               
Cow position:
               
chr19:7543255-7543434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
36-190
               

               
Cow position:
               
chr19:10786518-10786369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
36-192
               

               
Cow position:
               
chr19:19173995-19174153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr19:39254598-39254425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
41-205
               

               
Cow position:
               
chr19:15092271-15092118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr19:4800598-4800762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
42-204
               

               
Cow position:
               
chr19:43418268-43418418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
43-203
               

               
Cow position:
               
chr19:7492688-7492841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
43-205
               

               
Cow position:
               
chr19:52750902-52750744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr19:4503075-4503243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
45-203
               

               
Cow position:
               
chr19:13121414-13121262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
46-211
               

               
Cow position:
               
chr19:35540157-35540315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr19:4511652-4511494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
56-205
               

               
Cow position:
               
chr19:12093873-12094025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
64-205
               

               
Cow position:
               
chr19:39801757-39801899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
66-204
               

               
Cow position:
               
chr19:2221197-2221062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
69-211
               

               
Cow position:
               
chr19:47986740-47986879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               
Show alignments to all cow chromosomes.