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Cow genome map

           
Conread name:
           
Ss1.1-rpigcb_5487.5
        

               
Conread position:
               
1-137
               

               
Cow position:
               
chr20:15235638-15235775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr20:18837288-18837150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr20:17733905-17733765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr20:7806689-7806537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr20:26679995-26680146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr20:37200225-37200398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 163
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr20:41309409-41309579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr20:9701708-9701527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr20:11340932-11340755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr20:36207675-36207850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr20:5826810-5826989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr20:3034967-3035161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 138
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr20:23936544-23936349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr20:24391853-24392036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr20:18100289-18100470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr20:8556401-8556206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr20:19313192-19313002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr20:23846799-23846602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr20:12420748-12420552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr20:19363495-19363296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr20:28831837-28832037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr20:3599517-3599327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr20:8578117-8578317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr20:13876835-13876634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr20:15569077-15568881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr20:22704161-22704363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr20:33435294-33435096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr20:14759791-14759593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr20:5636353-5636552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr20:11482266-11482061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:746817-747018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:4205836-4206046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:4945377-4945177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:6096618-6096421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:11741431-11741231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:14980642-14980435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:15312532-15312744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:17251580-17251791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:28955830-28955627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:29805789-29805584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
150, 81
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:34001523-34001315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:34221349-34221553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:35797478-35797686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:40256837-40257044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:40446202-40446403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:41089921-41089718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr20:42469632-42469835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr20:19236951-19237152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr20:39247782-39247990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr20:21714621-21714838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr20:581047-580846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr20:8020769-8020923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
3-158
               

               
Cow position:
               
chr20:13994684-13994838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 120
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr20:15593171-15593341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr20:36010664-36010858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr20:7623187-7623001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr20:20312871-20312682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr20:9433459-9433654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr20:34251812-34251606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr20:5814445-5814635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr20:15761073-15760881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr20:20983873-20984060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr20:26076959-26077150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr20:6258189-6257988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr20:6054647-6054435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr20:25686477-25686274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr20:34098087-34097879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 144
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr20:38551246-38551446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr20:15565956-15565752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr20:10884489-10884279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
4-140
               

               
Cow position:
               
chr20:23679274-23679138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
4-159
               

               
Cow position:
               
chr20:19410492-19410336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr20:3781554-3781380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 157
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr20:7659343-7659168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr20:26469193-26469008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr20:21761648-21761829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr20:9379281-9379465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr20:22484732-22484925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr20:3321266-3321069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
4-200
               

               
Cow position:
               
chr20:31069506-31069702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 118
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr20:18500091-18500272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr20:14806758-14806953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr20:4892950-4892744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 150
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr20:12996136-12995937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr20:14433556-14433353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr20:14572484-14572295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr20:14735548-14735737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr20:35958517-35958716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr20:30817409-30817609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 15
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr20:33144683-33144480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr20:34597227-34597024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:3141455-3141648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:4334648-4334456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:9537006-9537213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
12, 155
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:10200219-10200420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:21928776-21928979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:22313286-22313086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:23064957-23064756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:34777058-34777254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:35907175-35906981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:39415616-39415824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:39728320-39728524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr20:40511886-40511682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr20:34107988-34108133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr20:19146747-19146945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr20:6848495-6848677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr20:37272588-37272770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr20:28296165-28296366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 141
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr20:11923366-11923192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
9-192
               

               
Cow position:
               
chr20:24002193-24002371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr20:10034046-10033851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr20:21019441-21019635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
7, 153
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr20:6890593-6890787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr20:35364924-35365119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr20:14879667-14879863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr20:36779850-36779655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
9-214
               

               
Cow position:
               
chr20:36633694-36633894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
11-140
               

               
Cow position:
               
chr20:22721900-22722033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
16-191
               

               
Cow position:
               
chr20:41973862-41973695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
16-211
               

               
Cow position:
               
chr20:6602925-6603115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
17-179
               

               
Cow position:
               
chr20:7550127-7550280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
17-181
               

               
Cow position:
               
chr20:27339951-27340107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
17-185
               

               
Cow position:
               
chr20:20203102-20203266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 106
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr20:11045559-11045742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr20:13794875-13795051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr20:17904046-17904227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr20:24833980-24834164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
17-205
               

               
Cow position:
               
chr20:28067540-28067351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr20:11188919-11188728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr20:30992025-30992215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr20:6240635-6240446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr20:7442241-7442058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr20:13025724-13025540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 88
               

               
Conread position:
               
17-211
               

               
Cow position:
               
chr20:13967374-13967182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
18-140
               

               
Cow position:
               
chr20:21325004-21325125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
18-192
               

               
Cow position:
               
chr20:4621458-4621285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
18-203
               

               
Cow position:
               
chr20:31261611-31261790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
18-205
               

               
Cow position:
               
chr20:18185456-18185635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr20:24000911-24000723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr20:29844936-29845125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
18-211
               

               
Cow position:
               
chr20:34901459-34901646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
19-203
               

               
Cow position:
               
chr20:39267071-39266891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr20:23541266-23541083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr20:10348637-10348828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
23-211
               

               
Cow position:
               
chr20:36040363-36040548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
24-205
               

               
Cow position:
               
chr20:19616379-19616560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr20:23103114-23103297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
161, 10
               

               
Conread position:
               
25-211
               

               
Cow position:
               
chr20:29404282-29404101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 97
               

               
Conread position:
               
27-205
               

               
Cow position:
               
chr20:6423869-6424039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
29-140
               

               
Cow position:
               
chr20:12334272-12334385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr20:27003836-27003656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
37, 137
               

               
Conread position:
               
30-211
               

               
Cow position:
               
chr20:28804462-28804644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
32-205
               

               
Cow position:
               
chr20:15118177-15118344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
32-211
               

               
Cow position:
               
chr20:28594184-28594360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
32-223
               

               
Cow position:
               
chr20:14100535-14100349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
41-173
               

               
Cow position:
               
chr20:38935326-38935196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
41-191
               

               
Cow position:
               
chr20:34084976-34085120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
41-205
               

               
Cow position:
               
chr20:24711745-24711908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
41-205
               

               
Cow position:
               
chr20:32988929-32988762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
41-221
               

               
Cow position:
               
chr20:21698297-21698479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
42-204
               

               
Cow position:
               
chr20:41883647-41883800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
43-205
               

               
Cow position:
               
chr20:36741388-36741544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
45-205
               

               
Cow position:
               
chr20:18392347-18392199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
45-211
               

               
Cow position:
               
chr20:19751222-19751381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
46-211
               

               
Cow position:
               
chr20:5644702-5644865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 93
               

               
Conread position:
               
50-211
               

               
Cow position:
               
chr20:16491991-16492147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 92
               

               
Conread position:
               
51-205
               

               
Cow position:
               
chr20:37357527-37357676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
51-210
               

               
Cow position:
               
chr20:5078544-5078700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
53-211
               

               
Cow position:
               
chr20:35192700-35192846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
58-211
               

               
Cow position:
               
chr20:23506542-23506396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
60-200
               

               
Cow position:
               
chr20:9473685-9473549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
65-192
               

               
Cow position:
               
chr20:21345362-21345484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
65-211
               

               
Cow position:
               
chr20:33067429-33067286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
77-211
               

               
Cow position:
               
chr20:10772150-10772280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               
Show alignments to all cow chromosomes.