Cow genome map

Conread name: Ss1.1-rpigcb_5487.5

Conread position: 1-119
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 65

Conread position: 1-137
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-137
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 1-138
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-139
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 1-140
Cow position:
Alignm length: 141
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-141
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 48

Conread position: 1-153
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 132

Conread position: 1-158
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 120

Conread position: 1-159
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 43

Conread position: 1-180
Cow position:
Alignm length: 181
Alignm identity: 145
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 19, 149

Conread position: 1-187
Cow position:
Alignm length: 188
Alignm identity: 147
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 184, 18

Conread position: 1-189
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 1-192
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 153

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 134

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 33

Conread position: 1-199
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 33

Conread position: 1-199
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 102

Conread position: 1-199
Cow position:
Alignm length: 203
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 138

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 29

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 98

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 76

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 131

Conread position: 1-204
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 19, 106

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 143

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 57, 19

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 29

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 132

Conread position: 1-205
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 147

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 49

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 142

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 14

Conread position: 1-210
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 131

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 140

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 143

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 19

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 12

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 14

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 132

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 29

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 122

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 161

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 143

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 31

Conread position: 2-199
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 140

Conread position: 2-210
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 161, 13

Conread position: 3-143
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 14

Conread position: 3-153
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-153
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 81

Conread position: 3-175
Cow position:
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 13

Conread position: 3-195
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 135

Conread position: 3-197
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 140

Conread position: 3-198
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 12

Conread position: 3-204
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 17, 115

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 78

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 17

Conread position: 3-205
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 59

Conread position: 3-209
Cow position:
Alignm length: 215
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 165

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 27

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 135

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 108

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 128

Conread position: 3-211
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 138

Conread position: 3-211
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 143

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 79

Conread position: 4-141
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 46

Conread position: 4-192
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 140

Conread position: 4-198
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 127

Conread position: 4-199
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 29

Conread position: 4-200
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 96

Conread position: 4-201
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 138

Conread position: 4-204
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 70

Conread position: 4-205
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 105

Conread position: 4-205
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 87

Conread position: 4-205
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 41

Conread position: 4-205
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 12, 134

Conread position: 4-205
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 141

Conread position: 4-205
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 144

Conread position: 4-205
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 40

Conread position: 4-205
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 106

Conread position: 4-205
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 89

Conread position: 4-209
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 4-211
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 45

Conread position: 4-211
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 136

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 139

Conread position: 4-211
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 84

Conread position: 4-211
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 138

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 137

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 139

Conread position: 4-214
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 5-205
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 115

Conread position: 6-210
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 156

Conread position: 8-211
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 8-226
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 154

Conread position: 9-180
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 126

Conread position: 9-205
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 131

Conread position: 9-211
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 137

Conread position: 9-222
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 34

Conread position: 10-138
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 11-211
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 12-212
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 5

Conread position: 12-214
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 26

Conread position: 16-205
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 132

Conread position: 16-211
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 132

Conread position: 17-198
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 106

Conread position: 17-205
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 120

Conread position: 17-205
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 14

Conread position: 17-205
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 102, 25

Conread position: 17-208
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 129

Conread position: 17-209
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 117

Conread position: 17-210
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 103, 127

Conread position: 17-211
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 134

Conread position: 17-211
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 119

Conread position: 17-211
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 116

Conread position: 17-211
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 100, 0

Conread position: 17-211
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 149

Conread position: 17-211
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 122

Conread position: 17-212
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 131

Conread position: 17-218
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 129

Conread position: 18-200
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 75

Conread position: 18-205
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 47, 138

Conread position: 18-211
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 128

Conread position: 18-211
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 81

Conread position: 19-211
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 0

Conread position: 20-203
Cow position:
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 22-211
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 21

Conread position: 22-221
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 191, 38

Conread position: 28-203
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 29-210
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 29, 102

Conread position: 32-205
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 34-198
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 34-205
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 130

Conread position: 40-209
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 110

Conread position: 41-211
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 46-200
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 51-211
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 52-200
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 56-211
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 60-192
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 60-211
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.