Cow genome map
| Conread name: | Ss1.1-rpigcb_5487.5 |
| Conread position: | 1-129 |
| Cow position: | chr24:11007021-11007151 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-131 |
| Cow position: | chr24:35405764-35405632 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-135 |
| Cow position: | chr24:18324422-18324559 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-137 |
| Cow position: | chr24:31359128-31359263 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 1-138 |
| Cow position: | chr24:28062754-28062891 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 1-138 |
| Cow position: | chr24:29540105-29539967 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 123 |
| Conread position: | 1-152 |
| Cow position: | chr24:25320795-25320950 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-152 |
| Cow position: | chr24:36486256-36486106 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 118 |
| Conread position: | 1-152 |
| Cow position: | chr24:38347486-38347639 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 1-153 |
| Cow position: | chr24:37246412-37246256 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-156 |
| Cow position: | chr24:33724045-33723888 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 1-170 |
| Cow position: | chr24:11119083-11119257 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 166 |
| Conread position: | 1-170 |
| Cow position: | chr24:27941204-27941033 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 1-176 |
| Cow position: | chr24:40673631-40673457 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 133 |
| Conread position: | 1-180 |
| Cow position: | chr24:11876689-11876864 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-180 |
| Cow position: | chr24:39483279-39483454 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 1-181 |
| Cow position: | chr24:5152039-5152213 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 19 |
| Conread position: | 1-191 |
| Cow position: | chr24:40184429-40184611 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 1-192 |
| Cow position: | chr24:32758958-32758768 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 162 |
| Conread position: | 1-200 |
| Cow position: | chr24:30314230-30314030 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 1-200 |
| Cow position: | chr24:42825692-42825502 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 1-203 |
| Cow position: | chr24:6132071-6131870 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 1-203 |
| Cow position: | chr24:17955641-17955445 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 1-205 |
| Cow position: | chr24:6102628-6102831 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 1-205 |
| Cow position: | chr24:7913804-7914007 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 157 |
| Conread position: | 1-205 |
| Cow position: | chr24:11886963-11887161 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 1-205 |
| Cow position: | chr24:20024413-20024614 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 1-205 |
| Cow position: | chr24:20250098-20249895 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 1-205 |
| Cow position: | chr24:20942973-20943169 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-205 |
| Cow position: | chr24:31324085-31324286 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 1-205 |
| Cow position: | chr24:34782981-34782785 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 1-205 |
| Cow position: | chr24:35794934-35794734 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 1-205 |
| Cow position: | chr24:39143410-39143613 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 1-206 |
| Cow position: | chr24:19633875-19634075 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 1-209 |
| Cow position: | chr24:22079262-22079468 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 1-211 |
| Cow position: | chr24:10125667-10125881 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 19, 156 |
| Conread position: | 1-211 |
| Cow position: | chr24:16089038-16089235 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 1-211 |
| Cow position: | chr24:19466128-19465910 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 171 |
| Conread position: | 1-211 |
| Cow position: | chr24:27906240-27906445 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 1-211 |
| Cow position: | chr24:28553741-28553547 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-211 |
| Cow position: | chr24:28721693-28721895 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 1-211 |
| Cow position: | chr24:29679505-29679303 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 1-211 |
| Cow position: | chr24:29781966-29782172 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 1-211 |
| Cow position: | chr24:30229274-30229480 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 1-211 |
| Cow position: | chr24:32124829-32124631 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 14 |
| Conread position: | 1-211 |
| Cow position: | chr24:44987577-44987368 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 1-214 |
| Cow position: | chr24:5633231-5633021 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 133 |
| Conread position: | 1-222 |
| Cow position: | chr24:10841411-10841188 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 1-223 |
| Cow position: | chr24:27039844-27040066 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 1-225 |
| Cow position: | chr24:18343854-18344084 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 1-231 |
| Cow position: | chr24:35572290-35572515 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 2-139 |
| Cow position: | chr24:34579159-34579020 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 2-152 |
| Cow position: | chr24:18734549-18734397 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 2-180 |
| Cow position: | chr24:30897735-30897560 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 3-140 |
| Cow position: | chr24:27267434-27267576 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 3-152 |
| Cow position: | chr24:19658357-19658511 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-179 |
| Cow position: | chr24:22433439-22433613 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 3-199 |
| Cow position: | chr24:34315156-34315351 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 13, 149 |
| Conread position: | 3-203 |
| Cow position: | chr24:18405509-18405312 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 63, 14 |
| Conread position: | 3-203 |
| Cow position: | chr24:32370111-32369918 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 3-205 |
| Cow position: | chr24:18266364-18266161 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 134 |
| Conread position: | 3-205 |
| Cow position: | chr24:29596007-29595808 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 3-211 |
| Cow position: | chr24:7917561-7917354 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 3-211 |
| Cow position: | chr24:18970701-18970501 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 3-211 |
| Cow position: | chr24:19535449-19535249 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 3-211 |
| Cow position: | chr24:19769297-19769496 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 3-212 |
| Cow position: | chr24:18485192-18484986 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 3-223 |
| Cow position: | chr24:32822975-32822752 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 151 |
| Conread position: | 4-137 |
| Cow position: | chr24:885878-885748 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 4-138 |
| Cow position: | chr24:27719950-27719815 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 4-145 |
| Cow position: | chr24:21264706-21264563 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 132 |
| Conread position: | 4-149 |
| Cow position: | chr24:39440752-39440602 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-152 |
| Cow position: | chr24:34396369-34396221 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 4-179 |
| Cow position: | chr24:17567190-17567360 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 130 |
| Conread position: | 4-181 |
| Cow position: | chr24:29707999-29707817 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 137 |
| Conread position: | 4-191 |
| Cow position: | chr24:27149202-27149386 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 4-192 |
| Cow position: | chr24:18695426-18695607 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 4-194 |
| Cow position: | chr24:18771382-18771195 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-197 |
| Cow position: | chr24:27967885-27968077 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 116, 13 |
| Conread position: | 4-199 |
| Cow position: | chr24:25885351-25885163 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 4-200 |
| Cow position: | chr24:24755254-24755443 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 4-200 |
| Cow position: | chr24:36404339-36404146 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 129 |
| Conread position: | 4-203 |
| Cow position: | chr24:14171889-14171690 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 159 |
| Conread position: | 4-203 |
| Cow position: | chr24:28327278-28327080 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 4-203 |
| Cow position: | chr24:32204989-32204796 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 21, 129 |
| Conread position: | 4-204 |
| Cow position: | chr24:15861796-15861598 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 143 |
| Conread position: | 4-205 |
| Cow position: | chr24:5893-5697 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 139 |
| Conread position: | 4-205 |
| Cow position: | chr24:2096084-2095881 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 4-205 |
| Cow position: | chr24:3430539-3430735 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 4-205 |
| Cow position: | chr24:15473165-15473359 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 4-205 |
| Cow position: | chr24:29170770-29170964 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 91 |
| Conread position: | 4-205 |
| Cow position: | chr24:40129927-40130130 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 148 |
| Conread position: | 4-205 |
| Cow position: | chr24:40849963-40850163 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 144 |
| Conread position: | 4-205 |
| Cow position: | chr24:43200468-43200269 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 4-209 |
| Cow position: | chr24:11839983-11840192 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 146 |
| Conread position: | 4-210 |
| Cow position: | chr24:24457441-24457244 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 4-210 |
| Cow position: | chr24:39219037-39218835 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 61, 124 |
| Conread position: | 4-211 |
| Cow position: | chr24:352800-352599 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 4-211 |
| Cow position: | chr24:814460-814254 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 4-211 |
| Cow position: | chr24:3152772-3152570 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 4-211 |
| Cow position: | chr24:3493697-3493891 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 4-211 |
| Cow position: | chr24:15373214-15373412 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 4-211 |
| Cow position: | chr24:20801539-20801339 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 27 |
| Conread position: | 4-211 |
| Cow position: | chr24:27052690-27052487 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 4-211 |
| Cow position: | chr24:28253511-28253714 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 4-211 |
| Cow position: | chr24:29673324-29673529 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 4-211 |
| Cow position: | chr24:34742560-34742760 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 4-211 |
| Cow position: | chr24:39159741-39159540 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 4-212 |
| Cow position: | chr24:18741766-18741564 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 141 |
| Conread position: | 4-215 |
| Cow position: | chr24:36555025-36554823 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 4-223 |
| Cow position: | chr24:33944209-33944420 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 5-205 |
| Cow position: | chr24:35073898-35074094 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 11, 129 |
| Conread position: | 6-210 |
| Cow position: | chr24:16895628-16895431 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 7-205 |
| Cow position: | chr24:32070776-32070964 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 8-205 |
| Cow position: | chr24:26554792-26554596 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 9-153 |
| Cow position: | chr24:27270591-27270739 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 9-189 |
| Cow position: | chr24:40983973-40984148 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 131 |
| Conread position: | 9-194 |
| Cow position: | chr24:30226750-30226930 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 7, 141 |
| Conread position: | 9-200 |
| Cow position: | chr24:211795-211983 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 9-205 |
| Cow position: | chr24:15707633-15707441 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 134 |
| Conread position: | 9-205 |
| Cow position: | chr24:43364169-43364362 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 9-205 |
| Cow position: | chr24:43635248-43635439 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 9-211 |
| Cow position: | chr24:28690501-28690692 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 9-223 |
| Cow position: | chr24:34008768-34008554 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 8, 144 |
| Conread position: | 11-140 |
| Cow position: | chr24:41423421-41423551 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 15-180 |
| Cow position: | chr24:16509787-16509946 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 53, 125 |
| Conread position: | 16-199 |
| Cow position: | chr24:27202415-27202595 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 162, 123 |
| Conread position: | 17-135 |
| Cow position: | chr24:20969977-20969862 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 17-140 |
| Cow position: | chr24:29389061-29389183 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 17-180 |
| Cow position: | chr24:17860436-17860282 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 17-181 |
| Cow position: | chr24:27207376-27207218 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 17-192 |
| Cow position: | chr24:24137038-24136873 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 105 |
| Conread position: | 17-199 |
| Cow position: | chr24:17832995-17832820 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 128 |
| Conread position: | 17-199 |
| Cow position: | chr24:18390470-18390297 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 17-205 |
| Cow position: | chr24:17104751-17104569 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 17-205 |
| Cow position: | chr24:24250547-24250732 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 17-205 |
| Cow position: | chr24:30484129-30483947 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 17-206 |
| Cow position: | chr24:31159439-31159621 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 17-211 |
| Cow position: | chr24:18017048-18017234 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 17-221 |
| Cow position: | chr24:44041194-44040987 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 18-205 |
| Cow position: | chr24:2970786-2970604 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 18-205 |
| Cow position: | chr24:6160269-6160088 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 21-180 |
| Cow position: | chr24:18357230-18357076 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 21-192 |
| Cow position: | chr24:31382721-31382889 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 21-205 |
| Cow position: | chr24:12200590-12200408 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 22-153 |
| Cow position: | chr24:25092354-25092488 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 23-153 |
| Cow position: | chr24:28332448-28332318 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 113 |
| Conread position: | 28-188 |
| Cow position: | chr24:35576705-35576551 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 35, 109 |
| Conread position: | 32-209 |
| Cow position: | chr24:43432626-43432795 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 34-200 |
| Cow position: | chr24:42007575-42007736 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 34-208 |
| Cow position: | chr24:6450332-6450506 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 34-211 |
| Cow position: | chr24:27290704-27290878 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 41-200 |
| Cow position: | chr24:27552738-27552890 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 101 |
| Conread position: | 41-211 |
| Cow position: | chr24:5683121-5683286 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 42-211 |
| Cow position: | chr24:32054503-32054668 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 50-211 |
| Cow position: | chr24:16645471-16645313 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 51-211 |
| Cow position: | chr24:41985843-41986003 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 110, 66 |
| Conread position: | 66-205 |
| Cow position: | chr24:27418230-27418097 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 72-205 |
| Cow position: | chr24:35150396-35150523 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 72-211 |
| Cow position: | chr24:39523573-39523442 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.