Cow genome map

Conread name: Ss1.1-rpigcb_5487.5

Conread position: 1-138
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 1-140
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 81

Conread position: 1-140
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-143
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 14

Conread position: 1-152
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 143

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 149

Conread position: 1-177
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 60

Conread position: 1-179
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 14

Conread position: 1-180
Cow position:
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 161

Conread position: 1-181
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 44

Conread position: 1-192
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 19

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 122

Conread position: 1-203
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 135

Conread position: 1-204
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 60

Conread position: 1-205
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 40

Conread position: 1-205
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 60

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 152

Conread position: 1-205
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 147

Conread position: 1-205
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 131

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 135

Conread position: 1-205
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 14, 110

Conread position: 1-205
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 161, 15

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 134

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 65

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 130

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 19, 63

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 140

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 60

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 118

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 85

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 148

Conread position: 1-211
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 155

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 32

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 158

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 135

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 162

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 165
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 17, 30

Conread position: 1-211
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 63

Conread position: 1-214
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 63

Conread position: 2-158
Cow position:
Alignm length: 158
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 2-205
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 138

Conread position: 2-211
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 3-140
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 42

Conread position: 3-140
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 15

Conread position: 3-180
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 97

Conread position: 3-181
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 47

Conread position: 3-200
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 138

Conread position: 3-203
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 58

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 24

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 17, 102

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 3-211
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 77

Conread position: 3-211
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 148

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 88

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 3-211
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 126

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 157, 0

Conread position: 3-215
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 81

Conread position: 4-137
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 4-152
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 4-168
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 145

Conread position: 4-193
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 62

Conread position: 4-195
Cow position:
Alignm length: 196
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 30

Conread position: 4-196
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 73

Conread position: 4-200
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 13

Conread position: 4-203
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 48

Conread position: 4-204
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 150

Conread position: 4-204
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 16, 101

Conread position: 4-205
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 79

Conread position: 4-205
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 4-205
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 122

Conread position: 4-205
Cow position:
Alignm length: 205
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 27, 15

Conread position: 4-205
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 137

Conread position: 4-210
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 104

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 31

Conread position: 4-211
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 15

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 81

Conread position: 4-211
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 16, 136

Conread position: 4-221
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 131

Conread position: 4-223
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 30

Conread position: 4-224
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 137

Conread position: 5-192
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 17, 129

Conread position: 5-205
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 145

Conread position: 5-205
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 142

Conread position: 6-211
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 14, 156

Conread position: 7-200
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 133

Conread position: 8-199
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 27

Conread position: 9-140
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 101

Conread position: 9-180
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 8

Conread position: 9-198
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 141

Conread position: 9-200
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 25

Conread position: 9-203
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 25

Conread position: 11-212
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 5, 132

Conread position: 14-199
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 16-211
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 43, 127

Conread position: 17-180
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 17-192
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 17

Conread position: 17-199
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 127

Conread position: 17-203
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 17-203
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 17-204
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 17-204
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 17-204
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 146, 5

Conread position: 17-205
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 111

Conread position: 17-205
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 17-210
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 172, 141

Conread position: 17-211
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 123

Conread position: 17-211
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 8

Conread position: 18-181
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 18-190
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 164, 123

Conread position: 18-196
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 122

Conread position: 18-211
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 48, 118

Conread position: 18-211
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 48, 8

Conread position: 18-211
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 124

Conread position: 19-192
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 126

Conread position: 24-205
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 26-166
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 121

Conread position: 26-211
Cow position:
Alignm length: 189
Alignm identity: 147
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 39, 20

Conread position: 33-199
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 106

Conread position: 34-210
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 112

Conread position: 41-210
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 42-208
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 43-196
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 101

Conread position: 43-200
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 28

Conread position: 43-211
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 106

Conread position: 44-211
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 115

Conread position: 48-211
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 51-211
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 53

Conread position: 51-220
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 165, 9

Conread position: 51-223
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 118

Conread position: 52-208
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 55-211
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 65-211
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 69-181
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 84

Conread position: 76-211
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 68

Show alignments to all cow chromosomes.