Cow genome map

Conread name: Ss1.1-rpigcb_5487.5

Conread position: 1-129
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 1-152
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 133

Conread position: 1-153
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 1-157
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 132

Conread position: 1-158
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 60

Conread position: 1-180
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 132

Conread position: 1-189
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 139

Conread position: 1-191
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 29

Conread position: 1-192
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 143

Conread position: 1-195
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 159

Conread position: 1-196
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 19, 163

Conread position: 1-199
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 136

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 132

Conread position: 1-202
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 163

Conread position: 1-205
Cow position:
Alignm length: 214
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 85

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 49

Conread position: 1-205
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 34

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 143

Conread position: 1-205
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 19, 31

Conread position: 1-208
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 17, 42

Conread position: 1-210
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 113

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 19

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 18

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 19, 56

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 145

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 141

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 19, 140

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 103

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 47

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 34

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 104

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 19

Conread position: 1-212
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 16

Conread position: 1-213
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 103

Conread position: 1-221
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 115

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 32

Conread position: 3-147
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 3-153
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 23

Conread position: 3-181
Cow position:
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 12

Conread position: 3-205
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 30

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 12

Conread position: 3-205
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 133

Conread position: 3-205
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 138

Conread position: 3-209
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 80

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 30

Conread position: 3-211
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 154

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 156

Conread position: 3-211
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 139

Conread position: 3-211
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 136

Conread position: 4-197
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 115

Conread position: 4-199
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 30

Conread position: 4-202
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 129

Conread position: 4-203
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 113

Conread position: 4-205
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 103

Conread position: 4-211
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 149

Conread position: 4-211
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 132

Conread position: 4-211
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 37

Conread position: 4-211
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 84

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 81

Conread position: 4-221
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 209, 16

Conread position: 4-221
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 137

Conread position: 4-222
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 15, 30

Conread position: 4-225
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 16

Conread position: 6-153
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 7-211
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 18

Conread position: 9-205
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 9-211
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 126

Conread position: 12-205
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 17-132
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-180
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 17-188
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 17-190
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 17-192
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 130

Conread position: 17-192
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 130

Conread position: 17-205
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 132

Conread position: 17-205
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 29, 14

Conread position: 17-210
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 153, 48

Conread position: 17-211
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 174, 32

Conread position: 17-211
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 102

Conread position: 17-211
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 17-211
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 128

Conread position: 18-187
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 63

Conread position: 18-205
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 14

Conread position: 18-211
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 115

Conread position: 18-211
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 100

Conread position: 19-205
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 19-206
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 143

Conread position: 21-211
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 22-211
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 122

Conread position: 22-211
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 88

Conread position: 25-211
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 26-200
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 28-222
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 99

Conread position: 29-209
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 32-205
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 118, 18

Conread position: 32-211
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 101

Conread position: 34-203
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 11

Conread position: 41-181
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 120

Conread position: 41-205
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 41-205
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 5

Conread position: 43-211
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 49-180
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 51-211
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 56-205
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 56-211
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 59-211
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 60-211
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 85

Conread position: 65-181
Cow position:
Alignm length: 117
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 69-211
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.