Cow genome map
| Conread name: | Ss1.1-rpigcf0_000238.5 |
| Conread position: | 30-159 |
| Cow position: | chr5:67655263-67655132 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 30-159 |
| Cow position: | chr5:68481163-68481037 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 74 |
| Conread position: | 31-159 |
| Cow position: | chr5:27690117-27690245 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 35-154 |
| Cow position: | chr5:41598770-41598886 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 37-154 |
| Cow position: | chr5:15089122-15089005 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 37-159 |
| Cow position: | chr5:15882540-15882662 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 37-159 |
| Cow position: | chr5:29505044-29504923 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 37-160 |
| Cow position: | chr5:38805407-38805531 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 39-159 |
| Cow position: | chr5:51360881-51360760 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 48-160 |
| Cow position: | chr5:51502931-51502825 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 54-159 |
| Cow position: | chr5:19905358-19905464 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 55-156 |
| Cow position: | chr5:27492395-27492290 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 55-159 |
| Cow position: | chr5:66119335-66119439 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-162 |
| Cow position: | chr5:59623289-59623395 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 56-155 |
| Cow position: | chr5:55985633-55985732 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-157 |
| Cow position: | chr5:61030313-61030413 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 56-159 |
| Cow position: | chr5:37713985-37714091 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 57-152 |
| Cow position: | chr5:72172939-72172844 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-159 |
| Cow position: | chr5:6987075-6986972 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 57-160 |
| Cow position: | chr5:17630954-17631057 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-159 |
| Cow position: | chr5:1276561-1276662 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-160 |
| Cow position: | chr5:27007810-27007708 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.