Cow genome map

Conread name: Ss1.1-rpigcf0_000238.5

Conread position: 32-159
Cow position: chrX:25848860-25848731 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 33-155
Cow position: chrX:6659316-6659192 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 108

Conread position: 35-154
Cow position: chrX:8517813-8517693 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 37-159
Cow position: chrX:42011216-42011094 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 37-163
Cow position: chrX:15994338-15994211 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 38-159
Cow position: chrX:9538493-9538373 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 38-159
Cow position: chrX:9838073-9837953 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 39-159
Cow position: chrX:2186190-2186073 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 39-159
Cow position: chrX:7361919-7362036 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 65

Conread position: 39-160
Cow position: chrX:10107043-10107162 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 40-159
Cow position: chrX:619073-619193 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 40-159
Cow position: chrX:31260696-31260815 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 14

Conread position: 42-159
Cow position: chrX:33886291-33886174 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 45-159
Cow position: chrX:20709999-20709886 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 45-160
Cow position: chrX:36778336-36778221 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 48-159
Cow position: chrX:46372819-46372930 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 49-159
Cow position: chrX:3161094-3161199 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 53-159
Cow position: chrX:11746762-11746656 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 55

Conread position: 53-161
Cow position: chrX:41083845-41083738 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 54-159
Cow position: chrX:35631830-35631938 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 55-155
Cow position: chrX:18989881-18989981 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 55-155
Cow position: chrX:39346867-39346968 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 55-159
Cow position: chrX:30729485-30729590 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 56-157
Cow position: chrX:18216194-18216093 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:160119-160220 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 56-159
Cow position: chrX:905264-905161 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:2029307-2029204 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:7425383-7425280 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:17042606-17042505 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 56-159
Cow position: chrX:17271371-17271474 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:23785571-23785468 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:25301837-25301938 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 56-159
Cow position: chrX:25338097-25337994 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:25419244-25419347 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:29601916-29602018 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 56-159
Cow position: chrX:38114105-38114002 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-159
Cow position: chrX:40116335-40116236 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 56-162
Cow position: chrX:18456310-18456204 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-162
Cow position: chrX:36961553-36961447 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 56-170
Cow position: chrX:630392-630511 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 57-154
Cow position: chrX:25713710-25713613 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 57-159
Cow position: chrX:6607336-6607234 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 90
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 57-159
Cow position: chrX:11656004-11655903 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 57-159
Cow position: chrX:21664810-21664910 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 57-159
Cow position: chrX:31340621-31340519 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 57-159
Cow position: chrX:36840789-36840686 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.