Cow genome map
Conread name: | Ss1.1-rpigcf0_000238.5 |
Conread position: | 32-159 |
Cow position: | chrX:25848860-25848731 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 33-155 |
Cow position: | chrX:6659316-6659192 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 55, 108 |
Conread position: | 35-154 |
Cow position: | chrX:8517813-8517693 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 37-159 |
Cow position: | chrX:42011216-42011094 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 95 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 37-163 |
Cow position: | chrX:15994338-15994211 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 38-159 |
Cow position: | chrX:9538493-9538373 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 38-159 |
Cow position: | chrX:9838073-9837953 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 39-159 |
Cow position: | chrX:2186190-2186073 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 39-159 |
Cow position: | chrX:7361919-7362036 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 65 |
Conread position: | 39-160 |
Cow position: | chrX:10107043-10107162 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 40-159 |
Cow position: | chrX:619073-619193 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 94 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 40-159 |
Cow position: | chrX:31260696-31260815 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 6, 14 |
Conread position: | 42-159 |
Cow position: | chrX:33886291-33886174 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 96 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 45-159 |
Cow position: | chrX:20709999-20709886 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 45-160 |
Cow position: | chrX:36778336-36778221 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-159 |
Cow position: | chrX:46372819-46372930 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 49-159 |
Cow position: | chrX:3161094-3161199 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 53-159 |
Cow position: | chrX:11746762-11746656 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 89 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 20, 55 |
Conread position: | 53-161 |
Cow position: | chrX:41083845-41083738 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 87 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 54-159 |
Cow position: | chrX:35631830-35631938 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 55-155 |
Cow position: | chrX:18989881-18989981 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 82 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 55-155 |
Cow position: | chrX:39346867-39346968 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 55-159 |
Cow position: | chrX:30729485-30729590 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 89 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 56-157 |
Cow position: | chrX:18216194-18216093 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:160119-160220 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 56-159 |
Cow position: | chrX:905264-905161 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:2029307-2029204 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:7425383-7425280 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:17042606-17042505 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 56-159 |
Cow position: | chrX:17271371-17271474 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 86 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:23785571-23785468 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:25301837-25301938 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 56-159 |
Cow position: | chrX:25338097-25337994 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 90 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:25419244-25419347 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 88 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:29601916-29602018 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 85 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 56-159 |
Cow position: | chrX:38114105-38114002 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 84 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-159 |
Cow position: | chrX:40116335-40116236 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 86 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 56-162 |
Cow position: | chrX:18456310-18456204 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 85 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-162 |
Cow position: | chrX:36961553-36961447 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 85 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 56-170 |
Cow position: | chrX:630392-630511 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 57-154 |
Cow position: | chrX:25713710-25713613 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 81 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 57-159 |
Cow position: | chrX:6607336-6607234 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 90 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 57-159 |
Cow position: | chrX:11656004-11655903 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 84 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 57-159 |
Cow position: | chrX:21664810-21664910 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 57-159 |
Cow position: | chrX:31340621-31340519 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 57-159 |
Cow position: | chrX:36840789-36840686 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 87 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.