Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 9-148
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 11

Conread position: 9-149
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 17-175
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 22

Conread position: 18-172
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 104

Conread position: 19-151
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 22-200
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 26

Conread position: 23-145
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 23-151
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 23-158
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 23-164
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 23-164
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 23-165
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 23-165
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 23-166
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 23-167
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 103

Conread position: 23-175
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 138

Conread position: 23-178
Cow position:
Alignm length: 161
Alignm identity: 134
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 59, 39

Conread position: 25-132
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 25-135
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 25-145
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 25-145
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 25-145
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 95

Conread position: 25-145
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 25-146
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 60

Conread position: 25-148
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 60, 125

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 25-149
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 107

Conread position: 25-149
Cow position:
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 86

Conread position: 25-149
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 25-149
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 126

Conread position: 25-150
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 25-150
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 25-150
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 25-151
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 25-151
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 25-151
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 25-151
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 25-151
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 25-151
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 25-151
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 25-151
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 95

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 25-151
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 25-152
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 106

Conread position: 25-152
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 37

Conread position: 25-153
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 65

Conread position: 25-154
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 25-156
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 25-156
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 25-157
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 138

Conread position: 25-160
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 29

Conread position: 25-161
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 63

Conread position: 25-161
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 25-161
Cow position:
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 121

Conread position: 25-161
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 113

Conread position: 25-161
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 126, 31

Conread position: 25-162
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 134

Conread position: 25-162
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 25-165
Cow position:
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 128

Conread position: 25-165
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 25-165
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 138

Conread position: 25-166
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 103

Conread position: 25-168
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 25-169
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 25-169
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 124

Conread position: 25-170
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 101

Conread position: 25-172
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 25-175
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 25-184
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 25-186
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 49

Conread position: 25-187
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 153

Conread position: 25-201
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 96

Conread position: 25-202
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 58, 156

Conread position: 26-149
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 26-151
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 26-160
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 26-161
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 26-164
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 29-165
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 31-148
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 31-149
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 31-149
Cow position:
Alignm length: 124
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 31-149
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 31-149
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 31-150
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 31-150
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 31-151
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 31-152
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 31-155
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 8

Conread position: 31-161
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 31-161
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 31-161
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 31-161
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 25

Conread position: 31-161
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 31-162
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 17

Conread position: 31-162
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 31-165
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 31-167
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 33

Conread position: 31-167
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 120, 44

Conread position: 31-176
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 31-224
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 32-160
Cow position:
Alignm length: 131
Alignm identity: 111
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 33-145
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 33-149
Cow position:
Alignm length: 122
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 33-165
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 118, 85

Conread position: 35-149
Cow position:
Alignm length: 117
Alignm identity: 98
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 91

Conread position: 35-156
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 33

Conread position: 37-147
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 40-166
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 45-150
Cow position:
Alignm length: 106
Alignm identity: 93
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 49-145
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 54-161
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 14

Show alignments to all cow chromosomes.