Cow genome map
Conread name: | Ss1.1-rpigcf0_006765.5 |
Conread position: | 21-155 |
Cow position: | chr11:32787153-32787018 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 22-158 |
Cow position: | chr11:49568186-49568044 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 116 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 48, 118 |
Conread position: | 23-149 |
Cow position: | chr11:33824859-33824731 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 51, 33 |
Conread position: | 23-150 |
Cow position: | chr11:58669129-58669254 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 49, 12 |
Conread position: | 23-151 |
Cow position: | chr11:4411822-4411688 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 50, 119 |
Conread position: | 23-151 |
Cow position: | chr11:18484142-18484016 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 23-152 |
Cow position: | chr11:28078540-28078675 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 23-152 |
Cow position: | chr11:83032727-83032863 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 110 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 23-164 |
Cow position: | chr11:36182741-36182889 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 49, 92 |
Conread position: | 23-165 |
Cow position: | chr11:39060555-39060406 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 117 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 58, 16 |
Conread position: | 25-137 |
Cow position: | chr11:42296571-42296456 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 25-145 |
Cow position: | chr11:51729335-51729453 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 102 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-149 |
Cow position: | chr11:41228-41353 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 97 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-149 |
Cow position: | chr11:1842012-1842140 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 25-149 |
Cow position: | chr11:13684662-13684538 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-149 |
Cow position: | chr11:23407513-23407643 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-149 |
Cow position: | chr11:25721948-25721822 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 105 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 47, 95 |
Conread position: | 25-149 |
Cow position: | chr11:32587075-32586943 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 25-149 |
Cow position: | chr11:62789179-62789310 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 25-149 |
Cow position: | chr11:74839659-74839786 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 55, 99 |
Conread position: | 25-150 |
Cow position: | chr11:30172353-30172483 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 25-150 |
Cow position: | chr11:57170550-57170426 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 25-151 |
Cow position: | chr11:2937615-2937487 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 25-151 |
Cow position: | chr11:15591426-15591295 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-151 |
Cow position: | chr11:20238725-20238861 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 25-151 |
Cow position: | chr11:49057440-49057568 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 25-151 |
Cow position: | chr11:63977106-63977240 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-152 |
Cow position: | chr11:27746972-27747104 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 108 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 25-153 |
Cow position: | chr11:22884461-22884592 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 49, 122 |
Conread position: | 25-157 |
Cow position: | chr11:51196034-51195906 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-158 |
Cow position: | chr11:81928459-81928320 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 47, 25 |
Conread position: | 25-161 |
Cow position: | chr11:42206470-42206611 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 43, 101 |
Conread position: | 25-161 |
Cow position: | chr11:62483913-62483779 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 25-162 |
Cow position: | chr11:19500743-19500608 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 25-162 |
Cow position: | chr11:20205803-20205662 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 25-165 |
Cow position: | chr11:18698928-18699069 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 25-165 |
Cow position: | chr11:27248539-27248686 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 54, 129 |
Conread position: | 25-165 |
Cow position: | chr11:63478421-63478559 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 118 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 25-167 |
Cow position: | chr11:15285566-15285423 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 25-167 |
Cow position: | chr11:18447443-18447301 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 115 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 51, 129 |
Conread position: | 25-167 |
Cow position: | chr11:18915075-18915211 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 25-167 |
Cow position: | chr11:47899317-47899450 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 115 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 25-167 |
Cow position: | chr11:48296079-48296224 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 71, 127 |
Conread position: | 25-168 |
Cow position: | chr11:25119883-25119733 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 47, 31 |
Conread position: | 25-168 |
Cow position: | chr11:55494728-55494866 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 25-172 |
Cow position: | chr11:52297172-52297017 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 44, 139 |
Conread position: | 25-172 |
Cow position: | chr11:56114989-56115143 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 25-174 |
Cow position: | chr11:62663186-62663038 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 59, 96 |
Conread position: | 25-175 |
Cow position: | chr11:2917537-2917383 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 61, 19 |
Conread position: | 25-178 |
Cow position: | chr11:58185931-58186085 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 25-186 |
Cow position: | chr11:63866611-63866442 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 21, 153 |
Conread position: | 25-187 |
Cow position: | chr11:44032060-44032227 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 54, 101 |
Conread position: | 25-194 |
Cow position: | chr11:65431567-65431742 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 47, 137 |
Conread position: | 25-194 |
Cow position: | chr11:81340492-81340316 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 45, 166 |
Conread position: | 25-195 |
Cow position: | chr11:3267607-3267443 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 123 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 25-205 |
Cow position: | chr11:66104341-66104150 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 25-206 |
Cow position: | chr11:42066913-42067104 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 140 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 48, 182 |
Conread position: | 26-145 |
Cow position: | chr11:45671320-45671201 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 26-151 |
Cow position: | chr11:62239794-62239926 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 26-151 |
Cow position: | chr11:83043313-83043182 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 26-160 |
Cow position: | chr11:62812900-62812758 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 53, 102 |
Conread position: | 26-161 |
Cow position: | chr11:63165597-63165456 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 26-165 |
Cow position: | chr11:30986688-30986835 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 26-166 |
Cow position: | chr11:80819955-80819822 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 125, 42 |
Conread position: | 26-167 |
Cow position: | chr11:48315347-48315199 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 56, 135 |
Conread position: | 26-169 |
Cow position: | chr11:12768448-12768601 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 31-151 |
Cow position: | chr11:40818572-40818448 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 104 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 45, 112 |
Conread position: | 31-151 |
Cow position: | chr11:46922831-46922702 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 31-151 |
Cow position: | chr11:67614867-67614740 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 53, 37 |
Conread position: | 31-156 |
Cow position: | chr11:21728226-21728099 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 38, 100 |
Conread position: | 31-160 |
Cow position: | chr11:8422063-8421931 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 31-161 |
Cow position: | chr11:63483997-63484136 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 31-164 |
Cow position: | chr11:71390511-71390378 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 50, 116 |
Conread position: | 31-165 |
Cow position: | chr11:4621376-4621238 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 50, 122 |
Conread position: | 31-176 |
Cow position: | chr11:25209450-25209603 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 45, 90 |
Conread position: | 31-187 |
Cow position: | chr11:48247007-48246857 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 121, 37 |
Conread position: | 32-165 |
Cow position: | chr11:46978340-46978203 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 113 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 44, 22 |
Conread position: | 33-160 |
Cow position: | chr11:54872702-54872567 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 33-165 |
Cow position: | chr11:65565070-65564942 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 34-162 |
Cow position: | chr11:22583018-22583147 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 94 |
Conread position: | 36-151 |
Cow position: | chr11:20093713-20093831 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 101 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 63, 25 |
Conread position: | 36-151 |
Cow position: | chr11:73076355-73076237 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 100 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 41-149 |
Cow position: | chr11:80823974-80824086 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 96 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 43-149 |
Cow position: | chr11:6638932-6638820 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 45-183 |
Cow position: | chr11:71146402-71146543 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 55-191 |
Cow position: | chr11:4422265-4422404 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 22, 125 |
Conread position: | 75-172 |
Cow position: | chr11:72406038-72405942 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 83 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 88, 0 |
Show alignments to all cow chromosomes.