Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 9-149
Cow position: chr19:24145065-24145209 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 120

Conread position: 17-150
Cow position: chr19:14252155-14252020 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 18-167
Cow position: chr19:22438742-22438892 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 16

Conread position: 22-149
Cow position: chr19:24759832-24759699 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 23-152
Cow position: chr19:42904062-42904183 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 23-160
Cow position: chr19:6531938-6532074 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 124, 51

Conread position: 23-161
Cow position: chr19:10213725-10213865 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 122

Conread position: 25-137
Cow position: chr19:13488445-13488330 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 49

Conread position: 25-145
Cow position: chr19:12264018-12264140 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 103
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 25-145
Cow position: chr19:20693923-20694047 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 25-148
Cow position: chr19:7668749-7668882 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 25-149
Cow position: chr19:21278525-21278653 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 25-149
Cow position: chr19:22871200-22871068 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 25-149
Cow position: chr19:28137209-28137335 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 25-150
Cow position: chr19:46180793-46180671 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 25-151
Cow position: chr19:5185200-5185068 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 25-151
Cow position: chr19:10971040-10970918 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 25-151
Cow position: chr19:12685885-12686019 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 25-151
Cow position: chr19:14631984-14631851 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 25-151
Cow position: chr19:23756687-23756561 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-151
Cow position: chr19:31268677-31268803 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-151
Cow position: chr19:31268899-31269025 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-151
Cow position: chr19:37467006-37466871 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 25-151
Cow position: chr19:43896363-43896491 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 17

Conread position: 25-151
Cow position: chr19:46822764-46822899 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 16

Conread position: 25-152
Cow position: chr19:10172392-10172521 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 25-152
Cow position: chr19:25835275-25835146 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 25-157
Cow position: chr19:49290402-49290262 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 25-159
Cow position: chr19:12943688-12943819 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 126, 48

Conread position: 25-159
Cow position: chr19:49221566-49221422 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 25-160
Cow position: chr19:17972208-17972069 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 31

Conread position: 25-161
Cow position: chr19:44013655-44013783 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 25-164
Cow position: chr19:1968261-1968118 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 25-164
Cow position: chr19:41388817-41388961 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 37

Conread position: 25-165
Cow position: chr19:23378731-23378881 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 25-165
Cow position: chr19:24693063-24693208 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 97

Conread position: 25-167
Cow position: chr19:15852982-15853131 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 57, 146

Conread position: 25-167
Cow position: chr19:43413838-43413984 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 127

Conread position: 25-169
Cow position: chr19:36177071-36177216 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 119, 43

Conread position: 25-170
Cow position: chr19:52728667-52728820 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 25-171
Cow position: chr19:33858920-33859055 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 25-172
Cow position: chr19:4438813-4438956 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 29

Conread position: 25-176
Cow position: chr19:4602639-4602482 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 129

Conread position: 25-181
Cow position: chr19:39751532-39751687 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 31

Conread position: 25-182
Cow position: chr19:47185027-47184856 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 25-186
Cow position: chr19:34420464-34420636 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 26-150
Cow position: chr19:38732195-38732327 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 26-151
Cow position: chr19:25832143-25832010 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 26-151
Cow position: chr19:49958926-49959059 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 123

Conread position: 26-164
Cow position: chr19:10930362-10930223 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 96

Conread position: 26-172
Cow position: chr19:20517492-20517635 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 42

Conread position: 27-169
Cow position: chr19:16621300-16621147 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 31-145
Cow position: chr19:39576507-39576390 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 31-149
Cow position: chr19:8862639-8862521 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 31-149
Cow position: chr19:47671805-47671922 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 46

Conread position: 31-149
Cow position: chr19:49409633-49409513 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 53, 94

Conread position: 31-151
Cow position: chr19:6854979-6855107 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 31-151
Cow position: chr19:33575584-33575709 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 31-151
Cow position: chr19:52608395-52608519 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 31-160
Cow position: chr19:46454908-46455040 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 33

Conread position: 31-161
Cow position: chr19:33033378-33033246 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 120

Conread position: 31-161
Cow position: chr19:37646699-37646561 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 31-161
Cow position: chr19:52694372-52694506 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 31-164
Cow position: chr19:35762189-35762052 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 31-165
Cow position: chr19:11559977-11559831 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 31-165
Cow position: chr19:11646628-11646768 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 31-165
Cow position: chr19:23088045-23088185 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 31-166
Cow position: chr19:22765682-22765817 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 77

Conread position: 31-169
Cow position: chr19:10238798-10238944 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 31-173
Cow position: chr19:268415-268559 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 61

Conread position: 31-177
Cow position: chr19:33988130-33988283 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 133

Conread position: 31-177
Cow position: chr19:38009953-38009814 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 31-188
Cow position: chr19:12202582-12202423 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 106

Conread position: 32-149
Cow position: chr19:27968634-27968506 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 76

Conread position: 32-149
Cow position: chr19:38500226-38500344 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 32-151
Cow position: chr19:22043294-22043167 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 32-151
Cow position: chr19:22414204-22414077 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 33-185
Cow position: chr19:10177641-10177803 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 34-151
Cow position: chr19:11376346-11376231 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 53

Conread position: 34-151
Cow position: chr19:37560133-37560018 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 34-164
Cow position: chr19:52187549-52187687 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 35-166
Cow position: chr19:23784354-23784217 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 39-167
Cow position: chr19:14613144-14613276 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 113

Conread position: 41-155
Cow position: chr19:25915983-25916100 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 42-151
Cow position: chr19:2793578-2793469 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 35

Conread position: 49-217
Cow position: chr19:6406458-6406290 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 123

Conread position: 55-169
Cow position: chr19:42069369-42069487 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 76-166
Cow position: chr19:14169326-14169236 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 77
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 78-164
Cow position: chr19:36060072-36060157 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 76
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 80-184
Cow position: chr19:12705500-12705397 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 74

Show alignments to all cow chromosomes.