Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 10-170
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 22-145
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 22-147
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 23-151
Cow position:
Alignm length: 135
Alignm identity: 111
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 23-164
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 23-164
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 23-165
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 23-191
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 170

Conread position: 23-264
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 39

Conread position: 24-138
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 24-187
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 25-135
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 25-138
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 25-145
Cow position:
Alignm length: 123
Alignm identity: 106
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 25-147
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 25-147
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 25-149
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 25-149
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 25-149
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 43

Conread position: 25-149
Cow position:
Alignm length: 127
Alignm identity: 110
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 57, 0

Conread position: 25-149
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 25-149
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 25-150
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 25-150
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 25-150
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 17

Conread position: 25-150
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 37

Conread position: 25-150
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 25-151
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 72

Conread position: 25-151
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 25-151
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 25-151
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 25-151
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 25-151
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 25-151
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 25-151
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 25-152
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 99

Conread position: 25-152
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 82

Conread position: 25-158
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 25-158
Cow position:
Alignm length: 134
Alignm identity: 113
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 25-160
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 133

Conread position: 25-161
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 25-161
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 29

Conread position: 25-161
Cow position:
Alignm length: 141
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 25-161
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 19

Conread position: 25-162
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 52

Conread position: 25-163
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 129

Conread position: 25-163
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 25-164
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 25-164
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 25-164
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 25-164
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 25-164
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 23

Conread position: 25-164
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 25-164
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 25-165
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 60

Conread position: 25-165
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 25-165
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 29

Conread position: 25-165
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 123

Conread position: 25-165
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 135

Conread position: 25-166
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 29

Conread position: 25-167
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 37

Conread position: 25-167
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 25-169
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 25-170
Cow position:
Alignm length: 152
Alignm identity: 127
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 25-173
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 128

Conread position: 25-174
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 132

Conread position: 25-176
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 97

Conread position: 25-179
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 25-180
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 101

Conread position: 25-187
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 128

Conread position: 25-187
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 25-187
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 14

Conread position: 26-149
Cow position:
Alignm length: 128
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 101

Conread position: 26-149
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 26-149
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 26-150
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 30

Conread position: 26-151
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 26-178
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 26-200
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 128

Conread position: 27-150
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 104

Conread position: 31-145
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 31-149
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 31-150
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 8

Conread position: 31-151
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 31-151
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 31-151
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 31-151
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 92

Conread position: 31-151
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 31-152
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 31-156
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 31-161
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 116

Conread position: 31-161
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 31-161
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 91

Conread position: 31-164
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 89

Conread position: 31-165
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 31-166
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 31-169
Cow position:
Alignm length: 140
Alignm identity: 118
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 45

Conread position: 31-174
Cow position:
Alignm length: 151
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 93

Conread position: 31-187
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 53

Conread position: 31-189
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 105

Conread position: 32-150
Cow position:
Alignm length: 121
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 101

Conread position: 32-165
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 32-166
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 22

Conread position: 32-194
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 33-151
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 33-172
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 34-151
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 34-161
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 117

Conread position: 34-166
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 34-171
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 34-173
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 35-164
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 43-151
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 50-167
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 115

Conread position: 54-170
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 113

Conread position: 62-164
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 89, 12

Conread position: 78-167
Cow position:
Alignm length: 90
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.