Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 17-150
Cow position: chr22:6960929-6961069 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 22-151
Cow position: chr22:12981665-12981527 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 23-143
Cow position: chr22:10532561-10532683 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 23-145
Cow position: chr22:23249666-23249545 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 23-147
Cow position: chr22:20472301-20472179 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 23-149
Cow position: chr22:4054531-4054407 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 23-149
Cow position: chr22:26945499-26945375 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 96

Conread position: 23-149
Cow position: chr22:30818274-30818405 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 27

Conread position: 23-151
Cow position: chr22:11613485-11613624 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 23-151
Cow position: chr22:28672206-28672332 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 23-151
Cow position: chr22:35029329-35029457 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 23-158
Cow position: chr22:26233693-26233840 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 23-161
Cow position: chr22:24903653-24903799 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 23-167
Cow position: chr22:22613167-22613314 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 31

Conread position: 23-182
Cow position: chr22:18838317-18838477 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 33

Conread position: 23-185
Cow position: chr22:19415442-19415276 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 160

Conread position: 25-135
Cow position: chr22:31646555-31646665 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 37

Conread position: 25-141
Cow position: chr22:29135021-29135143 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 25-145
Cow position: chr22:23675905-23675781 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 25-145
Cow position: chr22:25361547-25361669 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 25-147
Cow position: chr22:6360121-6359999 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 25-147
Cow position: chr22:14178764-14178638 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 25-147
Cow position: chr22:38115255-38115377 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 25-149
Cow position: chr22:8327808-8327937 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 32

Conread position: 25-149
Cow position: chr22:8357649-8357774 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 97

Conread position: 25-149
Cow position: chr22:10295098-10295224 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 25-149
Cow position: chr22:21905534-21905664 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 31

Conread position: 25-149
Cow position: chr22:27171198-27171073 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 25-149
Cow position: chr22:45019583-45019453 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 25-151
Cow position: chr22:2109564-2109431 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 25-151
Cow position: chr22:5616365-5616493 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 37

Conread position: 25-151
Cow position: chr22:12315873-12316006 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 25-151
Cow position: chr22:12741209-12741084 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 31

Conread position: 25-151
Cow position: chr22:15567953-15567824 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 43

Conread position: 25-151
Cow position: chr22:17852573-17852440 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 29

Conread position: 25-151
Cow position: chr22:28803981-28804110 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 25-151
Cow position: chr22:33948911-33948779 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 25-151
Cow position: chr22:44717784-44717918 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 25-151
Cow position: chr22:44741139-44741268 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 51, 78

Conread position: 25-152
Cow position: chr22:6721018-6720882 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 25-152
Cow position: chr22:18259282-18259415 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 25

Conread position: 25-153
Cow position: chr22:24890284-24890420 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 25-155
Cow position: chr22:1500957-1501085 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 31

Conread position: 25-155
Cow position: chr22:10416295-10416428 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 25-156
Cow position: chr22:16813859-16813998 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 25-158
Cow position: chr22:2184649-2184511 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 25-158
Cow position: chr22:12059744-12059603 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 25-158
Cow position: chr22:34441567-34441428 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 122

Conread position: 25-159
Cow position: chr22:12157781-12157643 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 98

Conread position: 25-161
Cow position: chr22:2201803-2201941 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 107

Conread position: 25-161
Cow position: chr22:3257599-3257459 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 25-161
Cow position: chr22:4060884-4060740 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 25-161
Cow position: chr22:4563426-4563564 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 25-161
Cow position: chr22:29546702-29546845 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 37

Conread position: 25-162
Cow position: chr22:4373105-4373246 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 97

Conread position: 25-162
Cow position: chr22:13891638-13891785 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 25-165
Cow position: chr22:12586591-12586732 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 98

Conread position: 25-168
Cow position: chr22:10162030-10162182 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 25-171
Cow position: chr22:13951326-13951481 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 25-174
Cow position: chr22:2100883-2100730 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 128

Conread position: 25-174
Cow position: chr22:10122442-10122589 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 25-174
Cow position: chr22:25742886-25742747 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 145, 52

Conread position: 25-176
Cow position: chr22:30684791-30684946 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 100

Conread position: 25-180
Cow position: chr22:7518618-7518780 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 130

Conread position: 25-182
Cow position: chr22:19548918-19549064 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 25-182
Cow position: chr22:39696367-39696528 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 11

Conread position: 25-185
Cow position: chr22:9735332-9735498 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 136

Conread position: 25-185
Cow position: chr22:39507977-39507807 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 19

Conread position: 25-186
Cow position: chr22:6176223-6176051 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 135

Conread position: 25-187
Cow position: chr22:12902792-12902621 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 162

Conread position: 25-188
Cow position: chr22:25221835-25221671 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 22

Conread position: 25-194
Cow position: chr22:34735927-34736085 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 29

Conread position: 26-149
Cow position: chr22:21526976-21527105 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 26-151
Cow position: chr22:40349407-40349539 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 36

Conread position: 29-141
Cow position: chr22:27267627-27267742 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 31-148
Cow position: chr22:34632231-34632346 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 31-149
Cow position: chr22:13957575-13957449 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 31-149
Cow position: chr22:17949903-17949781 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 31-150
Cow position: chr22:8446983-8447104 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 31-151
Cow position: chr22:1987041-1987169 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 31-151
Cow position: chr22:7584172-7584045 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 90

Conread position: 31-158
Cow position: chr22:1304484-1304350 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 11

Conread position: 31-164
Cow position: chr22:43812369-43812231 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 25

Conread position: 31-165
Cow position: chr22:17652504-17652644 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 31-165
Cow position: chr22:26786430-26786571 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 31-167
Cow position: chr22:10594677-10594825 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 31-167
Cow position: chr22:33985734-33985592 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 31-182
Cow position: chr22:12777308-12777156 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 145

Conread position: 31-190
Cow position: chr22:15695656-15695499 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 117

Conread position: 35-151
Cow position: chr22:7528495-7528610 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 41-161
Cow position: chr22:6709699-6709583 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 43-164
Cow position: chr22:4135680-4135805 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 43-167
Cow position: chr22:38320615-38320492 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 30

Conread position: 56-191
Cow position: chr22:18545386-18545524 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.