Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 23-149
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 23-151
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 25-147
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 25-148
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 25-149
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 88

Conread position: 25-149
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 25-149
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 25-149
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 31

Conread position: 25-150
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 25-150
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 102

Conread position: 25-151
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 37

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 25-151
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 25-151
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 25-151
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 25-151
Cow position:
Alignm length: 133
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 101

Conread position: 25-151
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 25-155
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 25-158
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 25-160
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 25-161
Cow position:
Alignm length: 140
Alignm identity: 116
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 25-164
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 25-164
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 25-164
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 25-165
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 25-165
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 62

Conread position: 25-166
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 25-167
Cow position:
Alignm length: 146
Alignm identity: 119
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 43, 141

Conread position: 25-170
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 25-171
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 25-171
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 102

Conread position: 25-173
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 25-182
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 25-192
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 98

Conread position: 25-202
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 173, 59

Conread position: 25-202
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 151

Conread position: 25-259
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 90

Conread position: 26-156
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 30

Conread position: 26-166
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 122

Conread position: 27-145
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 29-165
Cow position:
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 31-149
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 87, 37

Conread position: 31-149
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 31-149
Cow position:
Alignm length: 121
Alignm identity: 102
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 31

Conread position: 31-149
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 31-149
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 31-151
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 91

Conread position: 31-152
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 31-154
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 31-155
Cow position:
Alignm length: 127
Alignm identity: 107
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 31-159
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 38

Conread position: 31-161
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 38, 100

Conread position: 31-163
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 31-166
Cow position:
Alignm length: 141
Alignm identity: 117
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 31-175
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 23

Conread position: 31-196
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 127

Conread position: 32-163
Cow position:
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 32-168
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 33-150
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 95

Conread position: 33-165
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 50

Conread position: 34-150
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 34-174
Cow position:
Alignm length: 141
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 35-149
Cow position:
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 35-164
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 36-149
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 51, 5

Conread position: 36-161
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 5

Conread position: 39-161
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 43-186
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 45-149
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 19

Show alignments to all cow chromosomes.