Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 23-145
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 23-145
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 23-151
Cow position:
Alignm length: 131
Alignm identity: 109
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 23-151
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 23-151
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 23-154
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 39

Conread position: 23-159
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 16

Conread position: 23-168
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 55

Conread position: 24-150
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 25-135
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 25-143
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 118

Conread position: 25-145
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 25-148
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 25-149
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 47, 29

Conread position: 25-149
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 25-150
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 25-150
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 25-150
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 25-151
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 25-151
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 25-151
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 25-151
Cow position:
Alignm length: 128
Alignm identity: 108
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 49

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 25-151
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 25-152
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 25-157
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 25-159
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 25-160
Cow position:
Alignm length: 138
Alignm identity: 118
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 124

Conread position: 25-161
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 131

Conread position: 25-161
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 125

Conread position: 25-163
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 25-164
Cow position:
Alignm length: 148
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 37

Conread position: 25-165
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 25-165
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 26

Conread position: 25-165
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 25-169
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 25-171
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 25-187
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 89, 43

Conread position: 25-208
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 137

Conread position: 26-151
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 26-169
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 42

Conread position: 28-151
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 28-167
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 30-174
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 121

Conread position: 31-145
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 31-151
Cow position:
Alignm length: 121
Alignm identity: 101
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 31-151
Cow position:
Alignm length: 127
Alignm identity: 108
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 31-155
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 31-158
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 31-158
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 31-161
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 120

Conread position: 31-161
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 31-165
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 43, 131

Conread position: 31-165
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 31-165
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 136

Conread position: 31-167
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 31-167
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 91

Conread position: 31-176
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 32-151
Cow position:
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 32-151
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 33-140
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 33-148
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 33-148
Cow position:
Alignm length: 122
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 33-149
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 33-161
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 33-165
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 34-164
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 35-137
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 63-177
Cow position:
Alignm length: 115
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 78-168
Cow position:
Alignm length: 92
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 0

Show alignments to all cow chromosomes.