Cow genome map
Conread name: | Ss1.1-rpigcf0_006765.5 |
Conread position: | 18-174 |
Cow position: | chr29:18342464-18342616 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 17, 129 |
Conread position: | 22-145 |
Cow position: | chr29:570778-570650 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 42, 74 |
Conread position: | 23-151 |
Cow position: | chr29:22736425-22736554 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 53, 68 |
Conread position: | 23-161 |
Cow position: | chr29:19949369-19949515 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 117 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 23-170 |
Cow position: | chr29:32963599-32963744 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 120 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 66, 93 |
Conread position: | 23-178 |
Cow position: | chr29:22729629-22729791 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 60, 138 |
Conread position: | 25-139 |
Cow position: | chr29:4423375-4423262 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 93 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 25-142 |
Cow position: | chr29:1946844-1946724 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 60, 103 |
Conread position: | 25-148 |
Cow position: | chr29:11887332-11887458 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 25-149 |
Cow position: | chr29:936271-936401 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 25-149 |
Cow position: | chr29:12890746-12890874 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 49, 99 |
Conread position: | 25-149 |
Cow position: | chr29:28195457-28195335 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-149 |
Cow position: | chr29:29308507-29308384 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 104 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 50, 60 |
Conread position: | 25-151 |
Cow position: | chr29:17282132-17282261 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 107 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 49, 17 |
Conread position: | 25-151 |
Cow position: | chr29:19176845-19176715 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 25-151 |
Cow position: | chr29:19363774-19363908 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 25-151 |
Cow position: | chr29:24660749-24660877 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 55, 39 |
Conread position: | 25-151 |
Cow position: | chr29:31594082-31593957 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 104 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 25-151 |
Cow position: | chr29:33143290-33143156 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 25-152 |
Cow position: | chr29:26778946-26779079 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 25-159 |
Cow position: | chr29:36781240-36781102 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 25-160 |
Cow position: | chr29:40112446-40112588 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 25-161 |
Cow position: | chr29:9378701-9378846 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-161 |
Cow position: | chr29:9622628-9622501 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 25-161 |
Cow position: | chr29:10839005-10839149 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 25-161 |
Cow position: | chr29:22028891-22028750 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-162 |
Cow position: | chr29:36952236-36952101 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 25-164 |
Cow position: | chr29:17110021-17110166 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 54, 104 |
Conread position: | 25-164 |
Cow position: | chr29:35501590-35501452 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 58, 40 |
Conread position: | 25-166 |
Cow position: | chr29:25669158-25669298 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 119 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-167 |
Cow position: | chr29:4070688-4070836 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 25-168 |
Cow position: | chr29:31929051-31929202 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 49, 131 |
Conread position: | 25-179 |
Cow position: | chr29:20770408-20770568 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 60, 138 |
Conread position: | 25-179 |
Cow position: | chr29:39111248-39111100 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 51, 29 |
Conread position: | 25-186 |
Cow position: | chr29:41112817-41112656 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 56, 81 |
Conread position: | 26-161 |
Cow position: | chr29:9709760-9709903 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 28-149 |
Cow position: | chr29:39638911-39639038 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 46, 24 |
Conread position: | 28-169 |
Cow position: | chr29:29176288-29176145 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 23, 15 |
Conread position: | 31-148 |
Cow position: | chr29:40117641-40117762 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 31-151 |
Cow position: | chr29:23678779-23678901 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 31-151 |
Cow position: | chr29:44985341-44985461 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 31-196 |
Cow position: | chr29:22167008-22166844 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 118 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 45, 123 |
Conread position: | 32-147 |
Cow position: | chr29:12440852-12440959 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 98 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 85, 5 |
Conread position: | 32-175 |
Cow position: | chr29:4874809-4874666 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 33-148 |
Cow position: | chr29:22776151-22776273 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 33-151 |
Cow position: | chr29:659354-659481 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 33-161 |
Cow position: | chr29:31378164-31378295 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 110 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 33-165 |
Cow position: | chr29:26275678-26275815 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 113 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.