Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 18-174
Cow position: chr29:18342464-18342616 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 129

Conread position: 22-145
Cow position: chr29:570778-570650 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 74

Conread position: 23-151
Cow position: chr29:22736425-22736554 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 68

Conread position: 23-161
Cow position: chr29:19949369-19949515 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 23-170
Cow position: chr29:32963599-32963744 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 93

Conread position: 23-178
Cow position: chr29:22729629-22729791 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 138

Conread position: 25-139
Cow position: chr29:4423375-4423262 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 25-142
Cow position: chr29:1946844-1946724 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 103

Conread position: 25-148
Cow position: chr29:11887332-11887458 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 25-149
Cow position: chr29:936271-936401 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 25-149
Cow position: chr29:12890746-12890874 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 99

Conread position: 25-149
Cow position: chr29:28195457-28195335 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 25-149
Cow position: chr29:29308507-29308384 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 60

Conread position: 25-151
Cow position: chr29:17282132-17282261 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 17

Conread position: 25-151
Cow position: chr29:19176845-19176715 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 25-151
Cow position: chr29:19363774-19363908 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 25-151
Cow position: chr29:24660749-24660877 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 39

Conread position: 25-151
Cow position: chr29:31594082-31593957 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 25-151
Cow position: chr29:33143290-33143156 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 25-152
Cow position: chr29:26778946-26779079 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 25-159
Cow position: chr29:36781240-36781102 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 25-160
Cow position: chr29:40112446-40112588 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 25-161
Cow position: chr29:9378701-9378846 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 25-161
Cow position: chr29:9622628-9622501 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 25-161
Cow position: chr29:10839005-10839149 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 25-161
Cow position: chr29:22028891-22028750 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 25-162
Cow position: chr29:36952236-36952101 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 25-164
Cow position: chr29:17110021-17110166 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 104

Conread position: 25-164
Cow position: chr29:35501590-35501452 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 40

Conread position: 25-166
Cow position: chr29:25669158-25669298 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 25-167
Cow position: chr29:4070688-4070836 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 25-168
Cow position: chr29:31929051-31929202 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 49, 131

Conread position: 25-179
Cow position: chr29:20770408-20770568 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 138

Conread position: 25-179
Cow position: chr29:39111248-39111100 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 29

Conread position: 25-186
Cow position: chr29:41112817-41112656 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 81

Conread position: 26-161
Cow position: chr29:9709760-9709903 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 28-149
Cow position: chr29:39638911-39639038 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 24

Conread position: 28-169
Cow position: chr29:29176288-29176145 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 15

Conread position: 31-148
Cow position: chr29:40117641-40117762 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 31-151
Cow position: chr29:23678779-23678901 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 31-151
Cow position: chr29:44985341-44985461 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 31-196
Cow position: chr29:22167008-22166844 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 123

Conread position: 32-147
Cow position: chr29:12440852-12440959 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 5

Conread position: 32-175
Cow position: chr29:4874809-4874666 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 33-148
Cow position: chr29:22776151-22776273 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 33-151
Cow position: chr29:659354-659481 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 33-161
Cow position: chr29:31378164-31378295 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 33-165
Cow position: chr29:26275678-26275815 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.