Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 9-164
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 19

Conread position: 11-159
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 22-161
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 103

Conread position: 23-147
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 61, 102

Conread position: 23-149
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 106

Conread position: 23-149
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 23-151
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 23-155
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 23-164
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 129, 61

Conread position: 24-164
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 129

Conread position: 25-145
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 23

Conread position: 25-145
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 25-145
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 25-146
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 25-147
Cow position:
Alignm length: 124
Alignm identity: 103
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 67

Conread position: 25-149
Cow position:
Alignm length: 125
Alignm identity: 107
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 25-149
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 44

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 96

Conread position: 25-149
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 25-149
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 25-149
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 109
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 25-149
Cow position:
Alignm length: 133
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 25-149
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 25-149
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 25-149
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 61

Conread position: 25-149
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 26

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 97

Conread position: 25-149
Cow position:
Alignm length: 133
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 25-150
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 25-150
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 25-150
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 25-150
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 25-151
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 25

Conread position: 25-151
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 25-151
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 25-151
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 25-151
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 25-151
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 32

Conread position: 25-151
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 25-152
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 25-156
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 37

Conread position: 25-158
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 81

Conread position: 25-161
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 18

Conread position: 25-161
Cow position:
Alignm length: 139
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 94

Conread position: 25-161
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 25-161
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 130

Conread position: 25-161
Cow position:
Alignm length: 146
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 25-161
Cow position:
Alignm length: 144
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 25-162
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 31

Conread position: 25-162
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 25-163
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 25-164
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 110

Conread position: 25-164
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 25-165
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 93

Conread position: 25-165
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 25-165
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 25-165
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 128

Conread position: 25-165
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 25-167
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 132

Conread position: 25-167
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 25-168
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 98

Conread position: 25-168
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 146

Conread position: 25-172
Cow position:
Alignm length: 148
Alignm identity: 122
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 25-174
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 25-176
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 93

Conread position: 25-176
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 25-179
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 54, 0

Conread position: 25-189
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 160

Conread position: 25-200
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 79

Conread position: 25-235
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 133

Conread position: 26-151
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 0

Conread position: 26-160
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 123

Conread position: 26-161
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 26-167
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 102

Conread position: 26-168
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 103

Conread position: 29-153
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 31-145
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 31-147
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 31-147
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 46

Conread position: 31-149
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 31-149
Cow position:
Alignm length: 125
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 31-150
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 31-151
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 31-152
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 31-153
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 21

Conread position: 31-158
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 31-161
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 31

Conread position: 31-161
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 31-161
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 31-161
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 31-164
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 31-164
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 38

Conread position: 31-164
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 31-164
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 25

Conread position: 31-166
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 104

Conread position: 31-169
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 130

Conread position: 31-170
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 38

Conread position: 31-172
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 31-181
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 126

Conread position: 31-183
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 31-217
Cow position:
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 122

Conread position: 32-149
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 34

Conread position: 32-151
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 32-161
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 123

Conread position: 32-171
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 117

Conread position: 35-161
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 50, 0

Conread position: 36-149
Cow position:
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 36-150
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 67

Conread position: 39-158
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 41-145
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 42-166
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 43-150
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 0

Conread position: 75-167
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.