Cow genome map


           Conread name:
           Ss1.1-rpigcf0_006765.5
        

               Conread position:
               21-172
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               22-150
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 107
               

               Conread position:
               22-152
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               22-155
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               74, 40
               

               Conread position:
               22-180
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 139
               

               Conread position:
               23-145
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               23-151
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               23-152
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               23-176
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               23-182
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               25-145
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               25-146
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               25-147
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               25-147
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               25-147
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               25-148
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               25-149
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               25-149
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               25-149
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               57, 37
               

               Conread position:
               25-149
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               25-149
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               25-149
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               25-150
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               25-150
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               25-151
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 43
               

               Conread position:
               25-151
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               59, 66
               

               Conread position:
               25-151
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               25-151
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               25-151
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               25-151
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               25-151
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               25-152
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               25-152
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               25-152
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               25-152
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               25-152
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               25-153
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               25-161
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               25-163
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               25-164
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               25-164
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               25-165
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               25-165
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               25-165
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               25-165
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 101
               

               Conread position:
               25-166
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 86
               

               Conread position:
               25-166
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               25-167
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-167
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               25-167
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               25-169
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               25-169
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               25-169
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               25-170
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-173
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               25-174
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               25-174
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               121, 59
               

               Conread position:
               25-175
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               25-175
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               25-176
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               25-180
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               126, 93
               

               Conread position:
               25-188
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               26-151
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 110
               

               Conread position:
               26-151
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               26-161
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               26-165
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               26-167
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               31-143
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               31-145
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               31-145
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               31-149
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               31-149
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               31-149
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               31-149
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               31-149
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 54
               

               Conread position:
               31-150
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               31-151
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-151
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-151
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               31-152
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               31-162
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               31-167
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 130
               

               Conread position:
               31-168
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               31-168
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 125
               

               Conread position:
               31-173
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               31-176
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               31-181
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 36
               

               Conread position:
               31-185
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               140, 132
               

               Conread position:
               31-186
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-151
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               32-165
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 5
               

               Conread position:
               33-151
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               35-167
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               40-149
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               53-164
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               63-164
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 5
               
Show alignments to all cow chromosomes.