Cow genome map

Conread name: Ss1.1-rpigcf0_006765.5

Conread position: 18-151
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 20-161
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 45

Conread position: 22-151
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 23-146
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 23-149
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 107

Conread position: 23-151
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 23-151
Cow position:
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 23-151
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 23-151
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 23-151
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 23-151
Cow position:
Alignm length: 129
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 23-165
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 123

Conread position: 23-176
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 150

Conread position: 25-129
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 25-145
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 72

Conread position: 25-145
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 25-145
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 25-149
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 25-149
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 31

Conread position: 25-149
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 39

Conread position: 25-150
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 25-150
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 25-150
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 25-151
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 25-151
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 93

Conread position: 25-151
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 74

Conread position: 25-151
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 14

Conread position: 25-151
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 25-152
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 25-152
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 126

Conread position: 25-152
Cow position:
Alignm length: 132
Alignm identity: 110
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 25-152
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 25-152
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 25-154
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 25-157
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 25-158
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 25-158
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 22

Conread position: 25-158
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 48, 22

Conread position: 25-158
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 25-161
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 29

Conread position: 25-161
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 99

Conread position: 25-161
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 25-161
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 25-162
Cow position:
Alignm length: 144
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 56, 128

Conread position: 25-164
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 25-164
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 40

Conread position: 25-165
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 25-165
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 25-165
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 86

Conread position: 25-165
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 135

Conread position: 25-167
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 23

Conread position: 25-167
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 137

Conread position: 25-168
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 25-170
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 25-170
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 25-170
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 25-170
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 130

Conread position: 25-174
Cow position:
Alignm length: 157
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 128

Conread position: 25-175
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 73, 144

Conread position: 25-175
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 129

Conread position: 25-176
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 156

Conread position: 25-183
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 104

Conread position: 25-184
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 61, 142

Conread position: 25-184
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 25-184
Cow position:
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 43

Conread position: 25-188
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 49

Conread position: 25-208
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 39

Conread position: 26-144
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 26-149
Cow position:
Alignm length: 124
Alignm identity: 106
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 26-151
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 26-165
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 27-149
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 29

Conread position: 27-151
Cow position:
Alignm length: 129
Alignm identity: 109
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 27-156
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 56

Conread position: 31-144
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 31-149
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 31-149
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 31-151
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 31-151
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 31-151
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 73

Conread position: 31-151
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 31-151
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 31-154
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 31-158
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 31-161
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 118

Conread position: 31-161
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 31-161
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 43, 114

Conread position: 31-164
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 17

Conread position: 31-164
Cow position:
Alignm length: 139
Alignm identity: 122
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 121

Conread position: 31-165
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 124

Conread position: 31-165
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 68

Conread position: 31-170
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 48

Conread position: 31-191
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 127

Conread position: 31-213
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 95

Conread position: 32-147
Cow position:
Alignm length: 118
Alignm identity: 100
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 32-149
Cow position:
Alignm length: 119
Alignm identity: 102
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 34-149
Cow position:
Alignm length: 120
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 111

Conread position: 35-174
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 36-158
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 14

Conread position: 37-145
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 37-166
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 43-152
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 13

Conread position: 50-163
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 6

Conread position: 57-160
Cow position:
Alignm length: 104
Alignm identity: 89
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.