Cow genome map
Conread name: | Ss1.1-rpigcf0_006765.5 |
Conread position: | 6-155 |
Cow position: | chrX:45502221-45502369 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 75, 17 |
Conread position: | 22-167 |
Cow position: | chrX:4399209-4399360 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 123 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 56, 140 |
Conread position: | 23-151 |
Cow position: | chrX:37072480-37072616 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 23-151 |
Cow position: | chrX:39352876-39353002 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 23-164 |
Cow position: | chrX:23359023-23358874 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 24-152 |
Cow position: | chrX:12979742-12979604 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 25-135 |
Cow position: | chrX:45517838-45517948 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-141 |
Cow position: | chrX:11529436-11529558 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-142 |
Cow position: | chrX:31436567-31436690 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 25-143 |
Cow position: | chrX:25420424-25420546 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 105 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 25-145 |
Cow position: | chrX:1088050-1087924 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-145 |
Cow position: | chrX:14973653-14973533 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 92 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 25-145 |
Cow position: | chrX:21986198-21986077 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 101 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 25-149 |
Cow position: | chrX:9201641-9201771 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 107 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 25-149 |
Cow position: | chrX:16984734-16984863 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 56, 19 |
Conread position: | 25-149 |
Cow position: | chrX:17525774-17525649 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 60, 96 |
Conread position: | 25-149 |
Cow position: | chrX:34314117-34314249 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 25-149 |
Cow position: | chrX:35029833-35029708 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 107 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 61, 114 |
Conread position: | 25-149 |
Cow position: | chrX:38727046-38726916 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 109 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 9, 78 |
Conread position: | 25-149 |
Cow position: | chrX:42875305-42875437 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-150 |
Cow position: | chrX:13177383-13177255 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 44, 99 |
Conread position: | 25-150 |
Cow position: | chrX:25232090-25232211 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 25-151 |
Cow position: | chrX:27415487-27415357 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 55, 83 |
Conread position: | 25-152 |
Cow position: | chrX:10252107-10251971 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 25-152 |
Cow position: | chrX:14135771-14135906 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 111 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 25-152 |
Cow position: | chrX:40556366-40556230 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 25-153 |
Cow position: | chrX:9252070-9251931 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 25-153 |
Cow position: | chrX:20710265-20710390 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-154 |
Cow position: | chrX:23471773-23471635 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 25-155 |
Cow position: | chrX:27306547-27306673 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-155 |
Cow position: | chrX:31279831-31279693 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 116 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 25-158 |
Cow position: | chrX:8925792-8925918 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 125, 29 |
Conread position: | 25-161 |
Cow position: | chrX:11326004-11325869 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 51, 16 |
Conread position: | 25-161 |
Cow position: | chrX:12437179-12437042 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 25-161 |
Cow position: | chrX:20583759-20583899 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 54, 101 |
Conread position: | 25-161 |
Cow position: | chrX:31480061-31480203 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 114 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 38, 127 |
Conread position: | 25-163 |
Cow position: | chrX:27668865-27668721 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 122 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 54, 87 |
Conread position: | 25-163 |
Cow position: | chrX:29682018-29681876 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 71, 29 |
Conread position: | 25-164 |
Cow position: | chrX:4289537-4289679 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 25-164 |
Cow position: | chrX:8869309-8869161 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 25-164 |
Cow position: | chrX:34367077-34367212 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-164 |
Cow position: | chrX:37176967-37177110 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 44, 97 |
Conread position: | 25-164 |
Cow position: | chrX:41453395-41453542 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 25-166 |
Cow position: | chrX:1466255-1466408 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-169 |
Cow position: | chrX:45429929-45429782 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 51, 117 |
Conread position: | 25-170 |
Cow position: | chrX:41215415-41215574 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 25-171 |
Cow position: | chrX:31744911-31744763 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 49, 66 |
Conread position: | 25-172 |
Cow position: | chrX:11656174-11656330 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 126 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 25-175 |
Cow position: | chrX:2936050-2936208 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 25-176 |
Cow position: | chrX:34991457-34991614 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 60, 137 |
Conread position: | 25-178 |
Cow position: | chrX:38560652-38560810 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 25-179 |
Cow position: | chrX:32866968-32867129 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 25-182 |
Cow position: | chrX:16836196-16836032 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 25-183 |
Cow position: | chrX:4152938-4152781 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 123 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 152, 59 |
Conread position: | 25-184 |
Cow position: | chrX:47855073-47855242 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 57, 129 |
Conread position: | 25-201 |
Cow position: | chrX:27145697-27145882 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 26-145 |
Cow position: | chrX:4486930-4486800 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 26-147 |
Cow position: | chrX:41871161-41871283 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 70, 50 |
Conread position: | 26-149 |
Cow position: | chrX:20584422-20584540 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 106 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 26-149 |
Cow position: | chrX:28940339-28940472 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 110 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 26-149 |
Cow position: | chrX:42479927-42480055 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 47, 104 |
Conread position: | 26-203 |
Cow position: | chrX:42216537-42216355 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 143 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 54, 128 |
Conread position: | 29-149 |
Cow position: | chrX:20666796-20666674 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 104 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 31-136 |
Cow position: | chrX:39419615-39419506 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 31-137 |
Cow position: | chrX:41192803-41192905 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 89 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 31-148 |
Cow position: | chrX:5487840-5487721 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 100 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 31-149 |
Cow position: | chrX:12972783-12972906 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 101 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 31-149 |
Cow position: | chrX:31442730-31442611 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 94 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 31-149 |
Cow position: | chrX:34504949-34504825 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 31-149 |
Cow position: | chrX:34792213-34792095 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 107 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 43, 33 |
Conread position: | 31-149 |
Cow position: | chrX:38964207-38964325 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 92 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 31-149 |
Cow position: | chrX:41959853-41959975 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 31-151 |
Cow position: | chrX:6544353-6544475 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 31-151 |
Cow position: | chrX:23497592-23497467 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 103 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 53, 25 |
Conread position: | 31-152 |
Cow position: | chrX:39642524-39642397 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 106 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 31-165 |
Cow position: | chrX:1571490-1571351 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 31-178 |
Cow position: | chrX:45228580-45228730 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 110 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 31-206 |
Cow position: | chrX:43059152-43058977 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 41, 125 |
Conread position: | 32-151 |
Cow position: | chrX:13892917-13893036 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 99 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 33-146 |
Cow position: | chrX:4467068-4467176 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 97 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 48-187 |
Cow position: | chrX:38726064-38726203 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 124, 28 |
Conread position: | 75-149 |
Cow position: | chrX:33153669-33153743 (view UCSC Genome Browser custom track) |
Alignm length: | 75 |
Alignm identity: | 69 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 75-161 |
Cow position: | chrX:6559302-6559216 (view UCSC Genome Browser custom track) |
Alignm length: | 87 |
Alignm identity: | 77 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 75-164 |
Cow position: | chrX:12095617-12095528 (view UCSC Genome Browser custom track) |
Alignm length: | 90 |
Alignm identity: | 77 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 76-174 |
Cow position: | chrX:4615815-4615718 (view UCSC Genome Browser custom track) |
Alignm length: | 99 |
Alignm identity: | 84 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 78-169 |
Cow position: | chrX:31983421-31983330 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 78 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.