Cow genome map
| Conread name: | Ss1.1-rpigcf0_007044.5 |
| Conread position: | 1-237 |
| Cow position: | chr11:10363222-10363458 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 207, 29 |
| Conread position: | 1-299 |
| Cow position: | chr11:21497691-21497390 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 212 |
| Conread position: | 1-369 |
| Cow position: | chr11:76114804-76114457 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 7-281 |
| Cow position: | chr11:83033082-83033351 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 265, 73 |
| Conread position: | 7-372 |
| Cow position: | chr11:33348030-33348386 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 8-372 |
| Cow position: | chr11:44636598-44636961 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 9-224 |
| Cow position: | chr11:62609758-62609547 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 9-246 |
| Cow position: | chr11:70826104-70825872 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 9-347 |
| Cow position: | chr11:38577621-38577948 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 296, 135 |
| Conread position: | 9-360 |
| Cow position: | chr11:73924406-73924753 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 9-370 |
| Cow position: | chr11:62150740-62151081 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 211, 37 |
| Conread position: | 10-191 |
| Cow position: | chr11:79018902-79019083 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-221 |
| Cow position: | chr11:34693011-34692801 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 200 |
| Conread position: | 10-370 |
| Cow position: | chr11:12949795-12950149 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 10-372 |
| Cow position: | chr11:3234232-3233879 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 226, 196 |
| Conread position: | 11-351 |
| Cow position: | chr11:34032057-34032386 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 206, 65 |
| Conread position: | 11-372 |
| Cow position: | chr11:61958590-61958951 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 12-372 |
| Cow position: | chr11:44575602-44575938 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 331, 51 |
| Conread position: | 15-362 |
| Cow position: | chr11:77128810-77128468 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 186, 53 |
| Conread position: | 15-368 |
| Cow position: | chr11:28644239-28643881 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 316 |
| Conread position: | 16-347 |
| Cow position: | chr11:69076058-69075727 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 31 |
| Conread position: | 17-372 |
| Cow position: | chr11:23137903-23138263 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 158 |
| Conread position: | 17-372 |
| Cow position: | chr11:59702639-59702283 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 18-368 |
| Cow position: | chr11:80761232-80761581 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 18-372 |
| Cow position: | chr11:39115642-39115292 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 18-372 |
| Cow position: | chr11:83230254-83230589 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 19-197 |
| Cow position: | chr11:56290657-56290481 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 20-372 |
| Cow position: | chr11:27932423-27932064 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 21-349 |
| Cow position: | chr11:26845451-26845762 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 206, 53 |
| Conread position: | 21-372 |
| Cow position: | chr11:33341000-33341348 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 48 |
| Conread position: | 22-353 |
| Cow position: | chr11:70277970-70278295 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 22-368 |
| Cow position: | chr11:71455940-71455590 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 24-372 |
| Cow position: | chr11:69119435-69119098 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 51 |
| Conread position: | 25-297 |
| Cow position: | chr11:41293680-41293948 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 242, 14 |
| Conread position: | 26-252 |
| Cow position: | chr11:22747193-22747414 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 26-324 |
| Cow position: | chr11:44223022-44222734 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 26-372 |
| Cow position: | chr11:952404-952067 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 28 |
| Conread position: | 27-324 |
| Cow position: | chr11:40478714-40479011 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 182, 28 |
| Conread position: | 27-369 |
| Cow position: | chr11:66424744-66425086 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 189, 39 |
| Conread position: | 28-204 |
| Cow position: | chr11:47882941-47882766 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 28-360 |
| Cow position: | chr11:17278540-17278858 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 272, 13 |
| Conread position: | 28-368 |
| Cow position: | chr11:48650111-48649780 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 289, 178 |
| Conread position: | 29-324 |
| Cow position: | chr11:16906915-16907199 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 29-324 |
| Cow position: | chr11:41175827-41176106 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 29-360 |
| Cow position: | chr11:25387207-25386871 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 44, 313 |
| Conread position: | 30-277 |
| Cow position: | chr11:26274828-26275066 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 30-345 |
| Cow position: | chr11:62226124-62225810 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 230 |
| Conread position: | 31-372 |
| Cow position: | chr11:2092461-2092139 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 187, 45 |
| Conread position: | 32-213 |
| Cow position: | chr11:82730867-82731044 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 32-307 |
| Cow position: | chr11:69978104-69977838 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 32-327 |
| Cow position: | chr11:46580474-46580196 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 193, 44 |
| Conread position: | 32-372 |
| Cow position: | chr11:42043862-42044192 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 33-327 |
| Cow position: | chr11:50073071-50072791 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 33-372 |
| Cow position: | chr11:44642164-44642487 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 196, 36 |
| Conread position: | 34-353 |
| Cow position: | chr11:2917455-2917771 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 34-357 |
| Cow position: | chr11:17227513-17227835 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 34-357 |
| Cow position: | chr11:71500998-71501318 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 34-372 |
| Cow position: | chr11:17831090-17831429 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 34-372 |
| Cow position: | chr11:27747056-27746719 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 35-370 |
| Cow position: | chr11:36238908-36238582 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 21, 46 |
| Conread position: | 35-372 |
| Cow position: | chr11:20761972-20761643 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 41 |
| Conread position: | 36-307 |
| Cow position: | chr11:47772260-47772531 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 36-371 |
| Cow position: | chr11:63909538-63909853 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 263, 40 |
| Conread position: | 36-372 |
| Cow position: | chr11:1849046-1849367 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 290, 30 |
| Conread position: | 38-372 |
| Cow position: | chr11:72375549-72375890 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 39-229 |
| Cow position: | chr11:48248088-48248278 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-357 |
| Cow position: | chr11:2084269-2083952 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 39-372 |
| Cow position: | chr11:34144799-34145118 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 293, 41 |
| Conread position: | 40-278 |
| Cow position: | chr11:29659686-29659452 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 36 |
| Conread position: | 41-348 |
| Cow position: | chr11:5589-5286 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 274, 164 |
| Conread position: | 42-370 |
| Cow position: | chr11:15632445-15632759 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 175, 34 |
| Conread position: | 42-371 |
| Cow position: | chr11:21894038-21894354 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 42-372 |
| Cow position: | chr11:48272325-48271993 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 170 |
| Conread position: | 42-372 |
| Cow position: | chr11:56518188-56518514 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 170, 33 |
| Conread position: | 43-223 |
| Cow position: | chr11:36328917-36329091 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 43-324 |
| Cow position: | chr11:39499479-39499202 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 43-351 |
| Cow position: | chr11:30955124-30954815 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 295 |
| Conread position: | 43-372 |
| Cow position: | chr11:4207434-4207111 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 43-372 |
| Cow position: | chr11:80564417-80564103 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 44-372 |
| Cow position: | chr11:83066609-83066294 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 45-226 |
| Cow position: | chr11:1932369-1932548 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 45-287 |
| Cow position: | chr11:375579-375335 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 45-372 |
| Cow position: | chr11:58588466-58588143 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 46-216 |
| Cow position: | chr11:21885950-21885783 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 159, 10 |
| Conread position: | 46-355 |
| Cow position: | chr11:65157288-65157599 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 13 |
| Conread position: | 46-360 |
| Cow position: | chr11:54334447-54334141 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 243, 52 |
| Conread position: | 46-362 |
| Cow position: | chr11:13592854-13592542 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 46-363 |
| Cow position: | chr11:37804435-37804746 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 164, 39 |
| Conread position: | 46-369 |
| Cow position: | chr11:15772596-15772921 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 46-372 |
| Cow position: | chr11:19591876-19592199 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 70, 39 |
| Conread position: | 46-372 |
| Cow position: | chr11:24602077-24601769 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 46-372 |
| Cow position: | chr11:35153704-35154029 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 46-372 |
| Cow position: | chr11:42016521-42016840 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 39 |
| Conread position: | 46-372 |
| Cow position: | chr11:46747742-46748068 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 46-372 |
| Cow position: | chr11:53778737-53778411 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 259, 281 |
| Conread position: | 46-372 |
| Cow position: | chr11:55334036-55333707 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 170 |
| Conread position: | 46-372 |
| Cow position: | chr11:63847963-63847648 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 47-349 |
| Cow position: | chr11:67600902-67600601 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 176, 22 |
| Conread position: | 47-364 |
| Cow position: | chr11:59903008-59902694 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 38 |
| Conread position: | 47-370 |
| Cow position: | chr11:1070973-1071291 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 170, 29 |
| Conread position: | 47-372 |
| Cow position: | chr11:68913263-68912941 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 50-224 |
| Cow position: | chr11:46922770-46922945 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 50-248 |
| Cow position: | chr11:17721686-17721885 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 169, 25 |
| Conread position: | 50-249 |
| Cow position: | chr11:62812835-62813033 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 165, 25 |
| Conread position: | 50-249 |
| Cow position: | chr11:63866544-63866736 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 50-254 |
| Cow position: | chr11:48086035-48085829 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 50-280 |
| Cow position: | chr11:31410763-31410997 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 165, 25 |
| Conread position: | 50-307 |
| Cow position: | chr11:67615132-67615382 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 166, 25 |
| Conread position: | 50-312 |
| Cow position: | chr11:81135052-81135309 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 50-323 |
| Cow position: | chr11:35213053-35213316 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 170, 26 |
| Conread position: | 50-323 |
| Cow position: | chr11:80556335-80556065 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 171, 27 |
| Conread position: | 50-324 |
| Cow position: | chr11:45435196-45434930 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 50-324 |
| Cow position: | chr11:77319529-77319256 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 169, 26 |
| Conread position: | 50-325 |
| Cow position: | chr11:48296145-48295875 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 197, 26 |
| Conread position: | 50-327 |
| Cow position: | chr11:40395553-40395280 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 50-330 |
| Cow position: | chr11:56187724-56187458 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 177, 28 |
| Conread position: | 50-347 |
| Cow position: | chr11:52380755-52381051 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 170, 277 |
| Conread position: | 50-347 |
| Cow position: | chr11:77745138-77745435 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 166, 16 |
| Conread position: | 50-360 |
| Cow position: | chr11:18243828-18244131 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 50-362 |
| Cow position: | chr11:74316823-74316519 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 276, 19 |
| Conread position: | 50-368 |
| Cow position: | chr11:45646476-45646791 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 50-369 |
| Cow position: | chr11:15339177-15338876 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 50-371 |
| Cow position: | chr11:6233763-6234079 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 255, 168 |
| Conread position: | 50-372 |
| Cow position: | chr11:259059-259382 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 50-372 |
| Cow position: | chr11:11469536-11469835 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 50-372 |
| Cow position: | chr11:15285500-15285819 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 171, 26 |
| Conread position: | 50-372 |
| Cow position: | chr11:27248605-27248290 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 26 |
| Conread position: | 50-372 |
| Cow position: | chr11:27404956-27405270 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 50-372 |
| Cow position: | chr11:30192294-30191968 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 25 |
| Conread position: | 50-372 |
| Cow position: | chr11:36182809-36182487 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 50-372 |
| Cow position: | chr11:76369404-76369720 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 28 |
| Conread position: | 51-371 |
| Cow position: | chr11:18706709-18707014 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 51-372 |
| Cow position: | chr11:33414350-33414032 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 40 |
| Conread position: | 51-372 |
| Cow position: | chr11:70483737-70484063 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 52-266 |
| Cow position: | chr11:42159943-42160159 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 151, 16 |
| Conread position: | 52-370 |
| Cow position: | chr11:45631654-45631964 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 178, 7 |
| Conread position: | 52-372 |
| Cow position: | chr11:29960408-29960103 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 22 |
| Conread position: | 52-372 |
| Cow position: | chr11:43898251-43897936 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 52-372 |
| Cow position: | chr11:64089984-64090288 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 53-204 |
| Cow position: | chr11:897786-897636 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 53-372 |
| Cow position: | chr11:67747395-67747080 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 54-265 |
| Cow position: | chr11:24599276-24599487 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 167, 46 |
| Conread position: | 54-270 |
| Cow position: | chr11:31228073-31227866 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 54-284 |
| Cow position: | chr11:17036415-17036646 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 54-303 |
| Cow position: | chr11:62789242-62788993 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 173, 21 |
| Conread position: | 54-311 |
| Cow position: | chr11:63998979-63999233 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 169, 122 |
| Conread position: | 54-319 |
| Cow position: | chr11:70251029-70250774 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 54-322 |
| Cow position: | chr11:17493593-17493324 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 54-324 |
| Cow position: | chr11:70086445-70086168 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 161, 70 |
| Conread position: | 54-343 |
| Cow position: | chr11:30830501-30830791 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 284 |
| Conread position: | 54-351 |
| Cow position: | chr11:42296509-42296803 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 109, 23 |
| Conread position: | 54-353 |
| Cow position: | chr11:68206731-68207024 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 54-360 |
| Cow position: | chr11:11125773-11125469 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 163, 22 |
| Conread position: | 54-368 |
| Cow position: | chr11:7590301-7589993 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 285, 92 |
| Conread position: | 54-369 |
| Cow position: | chr11:65762477-65762795 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 282 |
| Conread position: | 54-370 |
| Cow position: | chr11:40818515-40818838 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 109, 23 |
| Conread position: | 54-371 |
| Cow position: | chr11:3393099-3393412 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 54-371 |
| Cow position: | chr11:34113379-34113062 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 150 |
| Conread position: | 54-371 |
| Cow position: | chr11:83043252-83043561 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 54-372 |
| Cow position: | chr11:35347642-35347959 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 122, 31 |
| Conread position: | 54-372 |
| Cow position: | chr11:44032122-44031798 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 54-372 |
| Cow position: | chr11:44036832-44036514 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 210, 92 |
| Conread position: | 54-372 |
| Cow position: | chr11:48544551-48544241 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 50 |
| Conread position: | 54-372 |
| Cow position: | chr11:52297106-52297425 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 141 |
| Conread position: | 54-372 |
| Cow position: | chr11:53773792-53773471 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 54-372 |
| Cow position: | chr11:55744578-55744272 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 245, 53 |
| Conread position: | 54-372 |
| Cow position: | chr11:66041389-66041072 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 55-254 |
| Cow position: | chr11:35803246-35803047 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 28 |
| Conread position: | 55-272 |
| Cow position: | chr11:39060493-39060705 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 198, 21 |
| Conread position: | 55-314 |
| Cow position: | chr11:49057501-49057256 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 55-324 |
| Cow position: | chr11:2575792-2576060 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 165, 150 |
| Conread position: | 55-347 |
| Cow position: | chr11:73512331-73512608 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 55-357 |
| Cow position: | chr11:34646699-34646402 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 161, 21 |
| Conread position: | 55-360 |
| Cow position: | chr11:62239854-62239554 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 177, 21 |
| Conread position: | 55-370 |
| Cow position: | chr11:2907419-2907721 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 20 |
| Conread position: | 55-372 |
| Cow position: | chr11:15017170-15016844 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 287 |
| Conread position: | 55-372 |
| Cow position: | chr11:23586750-23586433 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 156, 198 |
| Conread position: | 55-372 |
| Cow position: | chr11:30355168-30354865 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 153, 14 |
| Conread position: | 55-372 |
| Cow position: | chr11:32436446-32436127 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 55-372 |
| Cow position: | chr11:50152701-50153020 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 284 |
| Conread position: | 55-372 |
| Cow position: | chr11:79728554-79728875 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 43, 58 |
| Conread position: | 56-293 |
| Cow position: | chr11:40608484-40608722 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 167, 90 |
| Conread position: | 56-365 |
| Cow position: | chr11:59873040-59872736 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 56-365 |
| Cow position: | chr11:80923214-80923524 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 21 |
| Conread position: | 56-369 |
| Cow position: | chr11:65607578-65607892 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 56-372 |
| Cow position: | chr11:2925192-2925492 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 272, 20 |
| Conread position: | 56-372 |
| Cow position: | chr11:19247087-19247396 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 56-372 |
| Cow position: | chr11:62620485-62620183 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 149, 20 |
| Conread position: | 57-273 |
| Cow position: | chr11:30494101-30493893 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 57-324 |
| Cow position: | chr11:51729394-51729132 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 57-369 |
| Cow position: | chr11:55052979-55052683 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 275, 18 |
| Conread position: | 57-370 |
| Cow position: | chr11:17083203-17083500 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 57-371 |
| Cow position: | chr11:20238786-20238473 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 266 |
| Conread position: | 57-372 |
| Cow position: | chr11:1485748-1486068 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 57-372 |
| Cow position: | chr11:8525008-8525315 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 269, 19 |
| Conread position: | 57-372 |
| Cow position: | chr11:11558281-11557967 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 57-372 |
| Cow position: | chr11:21844029-21844337 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 176, 58 |
| Conread position: | 57-372 |
| Cow position: | chr11:35580371-35580052 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 284 |
| Conread position: | 57-372 |
| Cow position: | chr11:39462731-39462416 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 57-372 |
| Cow position: | chr11:66188207-66188522 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 58-324 |
| Cow position: | chr11:71390457-71390720 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 158, 60 |
| Conread position: | 58-360 |
| Cow position: | chr11:21728173-21728462 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 59-314 |
| Cow position: | chr11:23407570-23407315 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 157, 17 |
| Conread position: | 59-371 |
| Cow position: | chr11:41285-40980 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 60-301 |
| Cow position: | chr11:67614818-67615062 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 60-322 |
| Cow position: | chr11:28993631-28993886 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 60-360 |
| Cow position: | chr11:19500687-19500972 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 266, 20 |
| Conread position: | 60-371 |
| Cow position: | chr11:9221627-9221926 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 60-372 |
| Cow position: | chr11:18698985-18698673 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 139, 17 |
| Conread position: | 60-372 |
| Cow position: | chr11:71492757-71493062 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 186, 13 |
| Conread position: | 61-290 |
| Cow position: | chr11:31506952-31506722 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 62-260 |
| Cow position: | chr11:8437588-8437782 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 136 |
| Conread position: | 62-372 |
| Cow position: | chr11:16342124-16342443 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 251 |
| Conread position: | 63-372 |
| Cow position: | chr11:377539-377850 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 166, 12 |
| Conread position: | 63-372 |
| Cow position: | chr11:47545238-47544926 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 64-309 |
| Cow position: | chr11:65767301-65767056 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 152, 15 |
| Conread position: | 65-372 |
| Cow position: | chr11:35684401-35684699 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 11 |
| Conread position: | 65-372 |
| Cow position: | chr11:69811005-69810702 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 66-254 |
| Cow position: | chr11:33409161-33409347 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 66-371 |
| Cow position: | chr11:34121299-34120997 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 67-244 |
| Cow position: | chr11:30867284-30867104 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 67-372 |
| Cow position: | chr11:23128442-23128741 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 13 |
| Conread position: | 69-292 |
| Cow position: | chr11:6194302-6194081 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 69-326 |
| Cow position: | chr11:86720322-86720569 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 16 |
| Conread position: | 69-347 |
| Cow position: | chr11:8147801-8148076 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 154, 128 |
| Conread position: | 69-356 |
| Cow position: | chr11:17661181-17660906 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 257, 77 |
| Conread position: | 69-372 |
| Cow position: | chr11:73353962-73354255 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 235, 134 |
| Conread position: | 70-372 |
| Cow position: | chr11:5031679-5031979 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 153, 87 |
| Conread position: | 70-372 |
| Cow position: | chr11:10213472-10213767 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 44 |
| Conread position: | 71-327 |
| Cow position: | chr11:5201557-5201809 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 202, 10 |
| Conread position: | 71-360 |
| Cow position: | chr11:49153044-49152758 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 158, 75 |
| Conread position: | 71-369 |
| Cow position: | chr11:18572896-18572605 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 71-372 |
| Cow position: | chr11:1362372-1362682 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 72-360 |
| Cow position: | chr11:44234450-44234160 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 97, 87 |
| Conread position: | 76-251 |
| Cow position: | chr11:82740600-82740424 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 76-324 |
| Cow position: | chr11:55494770-55494523 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 137, 176 |
| Conread position: | 76-357 |
| Cow position: | chr11:35873912-35874181 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 149, 172 |
| Conread position: | 77-248 |
| Cow position: | chr11:28168333-28168505 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 77-327 |
| Cow position: | chr11:18851997-18851759 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 77-372 |
| Cow position: | chr11:43360694-43360998 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 126, 67 |
| Conread position: | 77-372 |
| Cow position: | chr11:47899358-47899075 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 129 |
| Conread position: | 77-372 |
| Cow position: | chr11:64044323-64044037 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 77-372 |
| Cow position: | chr11:80819915-80820200 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 78-360 |
| Cow position: | chr11:48496504-48496774 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 88, 132 |
| Conread position: | 81-360 |
| Cow position: | chr11:11232370-11232647 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 130, 64 |
| Conread position: | 85-372 |
| Cow position: | chr11:31352470-31352774 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 125, 269 |
| Conread position: | 85-372 |
| Cow position: | chr11:50778449-50778169 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 106 |
| Conread position: | 88-372 |
| Cow position: | chr11:8428590-8428293 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 125, 115 |
| Conread position: | 89-370 |
| Cow position: | chr11:8840668-8840940 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 92-356 |
| Cow position: | chr11:13061161-13061418 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 111 |
| Conread position: | 97-368 |
| Cow position: | chr11:49231943-49231676 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 97-372 |
| Cow position: | chr11:4732412-4732137 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 203, 129 |
| Conread position: | 98-372 |
| Cow position: | chr11:38639180-38638919 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 99-273 |
| Cow position: | chr11:69392630-69392452 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 99-319 |
| Cow position: | chr11:52983743-52983525 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 201, 110 |
| Conread position: | 99-370 |
| Cow position: | chr11:41272205-41271939 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 125, 79 |
| Conread position: | 108-372 |
| Cow position: | chr11:18340981-18341240 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 110-258 |
| Cow position: | chr11:54218771-54218628 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 110-324 |
| Cow position: | chr11:11647129-11646913 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 110-324 |
| Cow position: | chr11:42359171-42358963 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 142 |
| Conread position: | 110-364 |
| Cow position: | chr11:63156861-63157106 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 180, 80 |
| Conread position: | 110-369 |
| Cow position: | chr11:61858846-61859098 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 196, 124 |
| Conread position: | 110-370 |
| Cow position: | chr11:50951613-50951351 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 110-372 |
| Cow position: | chr11:16842927-16843207 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 110, 202 |
| Conread position: | 110-372 |
| Cow position: | chr11:24937722-24937460 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 193 |
| Conread position: | 110-372 |
| Cow position: | chr11:38874345-38874604 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 189, 216 |
| Conread position: | 110-372 |
| Cow position: | chr11:81162376-81162633 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 173 |
| Conread position: | 110-372 |
| Cow position: | chr11:83323620-83323372 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 215, 95 |
| Conread position: | 111-352 |
| Cow position: | chr11:82796233-82796470 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 156, 115 |
| Conread position: | 113-370 |
| Cow position: | chr11:30120608-30120861 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 97, 48 |
| Conread position: | 113-372 |
| Cow position: | chr11:3833309-3833549 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 113-372 |
| Cow position: | chr11:67804803-67804547 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 93 |
| Conread position: | 114-364 |
| Cow position: | chr11:63434005-63434252 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 214, 103 |
| Conread position: | 114-370 |
| Cow position: | chr11:45897997-45898255 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 102 |
| Conread position: | 115-348 |
| Cow position: | chr11:82940573-82940802 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 115-368 |
| Cow position: | chr11:30911952-30912190 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 210, 14 |
| Conread position: | 115-372 |
| Cow position: | chr11:62490490-62490232 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 58, 183 |
| Conread position: | 119-361 |
| Cow position: | chr11:20684524-20684770 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 222 |
| Conread position: | 119-369 |
| Cow position: | chr11:10620280-10620524 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 132 |
| Conread position: | 119-372 |
| Cow position: | chr11:3726336-3726084 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 181, 113 |
| Conread position: | 119-372 |
| Cow position: | chr11:4674398-4674652 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 110 |
| Conread position: | 119-372 |
| Cow position: | chr11:6400016-6400274 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 119-372 |
| Cow position: | chr11:32378235-32377986 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 186, 27 |
| Conread position: | 119-372 |
| Cow position: | chr11:35724016-35723775 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 185, 64 |
| Conread position: | 119-372 |
| Cow position: | chr11:48672760-48672500 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 119-372 |
| Cow position: | chr11:56728997-56728745 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 68 |
| Conread position: | 119-372 |
| Cow position: | chr11:57724777-57725030 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 186, 96 |
| Conread position: | 119-372 |
| Cow position: | chr11:61203213-61202961 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 113 |
| Conread position: | 119-372 |
| Cow position: | chr11:70273354-70273099 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 109 |
| Conread position: | 119-372 |
| Cow position: | chr11:81300573-81300814 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 221, 59 |
| Conread position: | 120-274 |
| Cow position: | chr11:11044986-11045140 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 120-372 |
| Cow position: | chr11:6835580-6835327 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 120-372 |
| Cow position: | chr11:45872264-45872520 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 74, 214 |
| Conread position: | 121-294 |
| Cow position: | chr11:80537533-80537360 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 10 |
| Conread position: | 121-304 |
| Cow position: | chr11:261222-261399 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 121-364 |
| Cow position: | chr11:2874443-2874192 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 121-372 |
| Cow position: | chr11:2788439-2788178 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 125 |
| Conread position: | 121-372 |
| Cow position: | chr11:9463881-9463627 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 121-372 |
| Cow position: | chr11:33349655-33349903 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 179, 79 |
| Conread position: | 123-372 |
| Cow position: | chr11:16910315-16910568 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 127-347 |
| Cow position: | chr11:2811690-2811908 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 199, 150 |
| Conread position: | 127-372 |
| Cow position: | chr11:23232475-23232715 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 130-357 |
| Cow position: | chr11:57170793-57171016 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 130-370 |
| Cow position: | chr11:8339369-8339604 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 155 |
| Conread position: | 130-370 |
| Cow position: | chr11:14094383-14094623 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 81, 175 |
| Conread position: | 130-372 |
| Cow position: | chr11:42792936-42793177 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 97 |
| Conread position: | 130-372 |
| Cow position: | chr11:65431091-65430860 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 131-371 |
| Cow position: | chr11:18591398-18591634 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 195, 81 |
| Conread position: | 135-372 |
| Cow position: | chr11:6154440-6154210 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 138-372 |
| Cow position: | chr11:75355649-75355409 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 139-323 |
| Cow position: | chr11:85986144-85986326 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 140-363 |
| Cow position: | chr11:955394-955170 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 75, 187 |
| Conread position: | 146-372 |
| Cow position: | chr11:16251223-16251450 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 182 |
| Conread position: | 148-308 |
| Cow position: | chr11:33824869-33825031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 150-370 |
| Cow position: | chr11:21830332-21830552 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 150-372 |
| Cow position: | chr11:37347495-37347272 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 155-368 |
| Cow position: | chr11:4412010-4412215 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 171, 47 |
| Conread position: | 158-370 |
| Cow position: | chr11:25320064-25319851 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 54, 21 |
| Conread position: | 166-370 |
| Cow position: | chr11:47586349-47586548 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 135, 46 |
| Conread position: | 166-372 |
| Cow position: | chr11:47165140-47165339 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 166-372 |
| Cow position: | chr11:63516828-63516622 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 160, 172 |
| Conread position: | 168-323 |
| Cow position: | chr11:70740978-70741131 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 168-372 |
| Cow position: | chr11:59155878-59156073 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 74 |
| Conread position: | 169-370 |
| Cow position: | chr11:71846351-71846548 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 157, 9 |
| Conread position: | 170-372 |
| Cow position: | chr11:50197436-50197646 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 170-372 |
| Cow position: | chr11:67950975-67951164 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 156, 40 |
| Conread position: | 174-372 |
| Cow position: | chr11:64334844-64334656 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 185-370 |
| Cow position: | chr11:68631710-68631894 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 119, 44 |
| Conread position: | 185-371 |
| Cow position: | chr11:47851008-47850826 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 185-372 |
| Cow position: | chr11:62749774-62749952 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 195-369 |
| Cow position: | chr11:84198698-84198871 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 109, 32 |
| Conread position: | 196-366 |
| Cow position: | chr11:63520745-63520577 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 131 |
| Conread position: | 197-372 |
| Cow position: | chr11:30867111-30866937 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 105 |
| Conread position: | 206-372 |
| Cow position: | chr11:35363459-35363293 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 26 |
| Conread position: | 210-356 |
| Cow position: | chr11:25165399-25165254 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 211-372 |
| Cow position: | chr11:41598768-41598929 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-360 |
| Cow position: | chr11:19508246-19508103 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 109, 121 |
| Conread position: | 227-372 |
| Cow position: | chr11:84890809-84890954 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 109, 99 |
| Conread position: | 249-372 |
| Cow position: | chr11:62376517-62376639 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 267-370 |
| Cow position: | chr11:26277190-26277290 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.