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Cow genome map

           
Conread name:
           
Ss1.1-rpigcf0_007044.5
        

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:14261349-14261138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr15:5726243-5726552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
7-372
               

               
Cow position:
               
chr15:21389247-21388893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
298, 58
               

               
Conread position:
               
10-180
               

               
Cow position:
               
chr15:24953608-24953438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr15:21820904-21821160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
196, 85
               

               
Conread position:
               
10-288
               

               
Cow position:
               
chr15:35441160-35440884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
200, 11
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr15:6530931-6530571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 65
               

               
Conread position:
               
11-370
               

               
Cow position:
               
chr15:27863408-27863052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr15:34751004-34751233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 136
               

               
Conread position:
               
12-372
               

               
Cow position:
               
chr15:52611222-52611585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
14-357
               

               
Cow position:
               
chr15:36782408-36782066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 55
               

               
Conread position:
               
17-179
               

               
Cow position:
               
chr15:20725994-20725832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr15:27016323-27016127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 59
               

               
Conread position:
               
17-365
               

               
Cow position:
               
chr15:275579-275912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
17-372
               

               
Cow position:
               
chr15:42789223-42788878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 31
               

               
Conread position:
               
20-324
               

               
Cow position:
               
chr15:29330932-29331231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
24-357
               

               
Cow position:
               
chr15:39316911-39316574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
26-370
               

               
Cow position:
               
chr15:22871547-22871880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
273, 50
               

               
Conread position:
               
26-372
               

               
Cow position:
               
chr15:33976762-33976421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
28-356
               

               
Cow position:
               
chr15:10335689-10336015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
28-372
               

               
Cow position:
               
chr15:22939389-22939061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
195, 15
               

               
Conread position:
               
28-372
               

               
Cow position:
               
chr15:49257802-49258149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
188, 14
               

               
Conread position:
               
29-254
               

               
Cow position:
               
chr15:40415707-40415481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 178
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr15:33303264-33303607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
152, 49
               

               
Conread position:
               
30-372
               

               
Cow position:
               
chr15:23598383-23598036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
31-366
               

               
Cow position:
               
chr15:29604762-29604450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
31-371
               

               
Cow position:
               
chr15:10457073-10456739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
33-324
               

               
Cow position:
               
chr15:34207249-34206961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
188, 129
               

               
Conread position:
               
33-372
               

               
Cow position:
               
chr15:47042691-47042365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
36-214
               

               
Cow position:
               
chr15:11912616-11912440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr15:10442558-10442331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
39-360
               

               
Cow position:
               
chr15:12723033-12723351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
115, 147
               

               
Conread position:
               
40-370
               

               
Cow position:
               
chr15:22136637-22136952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
42-208
               

               
Cow position:
               
chr15:25650461-25650300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
42-316
               

               
Cow position:
               
chr15:30471023-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
178, 38
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr15:6969943-6970258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
182, 34
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr15:38883098-38883428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 38
               

               
Conread position:
               
43-368
               

               
Cow position:
               
chr15:12304588-12304909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
165, 40
               

               
Conread position:
               
43-371
               

               
Cow position:
               
chr15:17233139-17233465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
43-371
               

               
Cow position:
               
chr15:30047595-30047268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
43-372
               

               
Cow position:
               
chr15:608096-608422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
44-372
               

               
Cow position:
               
chr15:39599397-39599712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
44-372
               

               
Cow position:
               
chr15:40957534-40957851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
179, 32
               

               
Conread position:
               
46-264
               

               
Cow position:
               
chr15:36846231-36846007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
46-324
               

               
Cow position:
               
chr15:286431-286706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr15:12655962-12655656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
46-357
               

               
Cow position:
               
chr15:20487250-20486951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
253, 34
               

               
Conread position:
               
46-366
               

               
Cow position:
               
chr15:11996072-11995756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
259, 23
               

               
Conread position:
               
46-368
               

               
Cow position:
               
chr15:1330151-1329831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
46-370
               

               
Cow position:
               
chr15:26573333-26573657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
46-371
               

               
Cow position:
               
chr15:39405698-39406006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
255, 31
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr15:45471-45144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr15:16583737-16583439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
280, 34
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr15:25667269-25666951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
46-372
               

               
Cow position:
               
chr15:27900557-27900229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
164, 52
               

               
Conread position:
               
47-347
               

               
Cow position:
               
chr15:10608351-10608055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
47-363
               

               
Cow position:
               
chr15:12170196-12170509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
48-360
               

               
Cow position:
               
chr15:33624907-33625213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
48-369
               

               
Cow position:
               
chr15:29810077-29810378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
48-372
               

               
Cow position:
               
chr15:244735-245046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
50-322
               

               
Cow position:
               
chr15:24982222-24981967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
50-323
               

               
Cow position:
               
chr15:22553585-22553316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
167, 25
               

               
Conread position:
               
50-324
               

               
Cow position:
               
chr15:9879427-9879168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr15:36353625-36353908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 26
               

               
Conread position:
               
50-352
               

               
Cow position:
               
chr15:4295715-4296020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
50-356
               

               
Cow position:
               
chr15:17762864-17763165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
169, 96
               

               
Conread position:
               
50-357
               

               
Cow position:
               
chr15:36887795-36888084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
276, 18
               

               
Conread position:
               
50-358
               

               
Cow position:
               
chr15:8353997-8354305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
50-368
               

               
Cow position:
               
chr15:2953177-2952861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr15:225845-225535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
173, 19
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr15:20391322-20391008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 170
               

               
Conread position:
               
50-370
               

               
Cow position:
               
chr15:33643047-33643361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
50-372
               

               
Cow position:
               
chr15:25208803-25208493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
51-351
               

               
Cow position:
               
chr15:18671498-18671199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
51-370
               

               
Cow position:
               
chr15:50302142-50302453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
51-371
               

               
Cow position:
               
chr15:23696949-23696646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr15:1083412-1083100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr15:17100754-17100442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr15:36435163-36435482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
51-372
               

               
Cow position:
               
chr15:38837703-38838022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
52-323
               

               
Cow position:
               
chr15:11559398-11559128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
53-186
               

               
Cow position:
               
chr15:34223826-34223957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
53-372
               

               
Cow position:
               
chr15:795062-794741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
166, 32
               

               
Conread position:
               
54-227
               

               
Cow position:
               
chr15:21903453-21903281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 157
               

               
Conread position:
               
54-253
               

               
Cow position:
               
chr15:36952244-36952043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
54-260
               

               
Cow position:
               
chr15:41056246-41056041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
25, 175
               

               
Conread position:
               
54-324
               

               
Cow position:
               
chr15:34896721-34896990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
54-324
               

               
Cow position:
               
chr15:35112919-35112650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
54-332
               

               
Cow position:
               
chr15:14576287-14576571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
165, 230
               

               
Conread position:
               
54-345
               

               
Cow position:
               
chr15:16261286-16261562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
272, 69
               

               
Conread position:
               
54-345
               

               
Cow position:
               
chr15:26079390-26079115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
54-351
               

               
Cow position:
               
chr15:39598201-39598497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
54-370
               

               
Cow position:
               
chr15:36259642-36259331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 23
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr15:3700326-3700010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 15
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr15:5235036-5234732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
278, 34
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr15:14505393-14505701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr15:20081732-20082032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr15:22532213-22532513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 22
               

               
Conread position:
               
54-372
               

               
Cow position:
               
chr15:43626431-43626734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
245, 38
               

               
Conread position:
               
55-207
               

               
Cow position:
               
chr15:26442175-26442327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-246
               

               
Cow position:
               
chr15:52317019-52317208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 46
               

               
Conread position:
               
55-262
               

               
Cow position:
               
chr15:14176537-14176334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
55-262
               

               
Cow position:
               
chr15:14987950-14988155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
155, 86
               

               
Conread position:
               
55-311
               

               
Cow position:
               
chr15:51307717-51307465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
55-324
               

               
Cow position:
               
chr15:9106994-9107264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
55-368
               

               
Cow position:
               
chr15:19186651-19186347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
218, 25
               

               
Conread position:
               
55-371
               

               
Cow position:
               
chr15:23275502-23275809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
55-371
               

               
Cow position:
               
chr15:26919313-26919003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
271, 25
               

               
Conread position:
               
56-323
               

               
Cow position:
               
chr15:49273918-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
56-327
               

               
Cow position:
               
chr15:17337325-17337589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr15:5420926-5420610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 215
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr15:24967757-24968064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr15:36773732-36773422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
199, 58
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr15:44658322-44658632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr15:49922097-49922412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
57-254
               

               
Cow position:
               
chr15:4694708-4694903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
57-255
               

               
Cow position:
               
chr15:26718958-26718762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
160, 90
               

               
Conread position:
               
57-324
               

               
Cow position:
               
chr15:53716399-53716660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr15:24994550-24994253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr15:30001657-30001962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
238, 35
               

               
Conread position:
               
57-372
               

               
Cow position:
               
chr15:33306072-33306380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 125
               

               
Conread position:
               
58-293
               

               
Cow position:
               
chr15:14888681-14888444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
158, 41
               

               
Conread position:
               
58-372
               

               
Cow position:
               
chr15:1722885-1722578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
164, 17
               

               
Conread position:
               
58-372
               

               
Cow position:
               
chr15:17084174-17084484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
60-294
               

               
Cow position:
               
chr15:48711087-48710856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
60-358
               

               
Cow position:
               
chr15:16543485-16543201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
60-360
               

               
Cow position:
               
chr15:16822904-16823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
169, 54
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr15:25906874-25907185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
149, 9
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr15:27973250-27972943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
246, 14
               

               
Conread position:
               
60-372
               

               
Cow position:
               
chr15:30986330-30986019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
162, 226
               

               
Conread position:
               
61-224
               

               
Cow position:
               
chr15:50332948-50333110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
61-255
               

               
Cow position:
               
chr15:5657802-5657998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
62-372
               

               
Cow position:
               
chr15:16307390-16307688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 13
               

               
Conread position:
               
63-249
               

               
Cow position:
               
chr15:44237386-44237571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
63-253
               

               
Cow position:
               
chr15:13395521-13395707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
63-370
               

               
Cow position:
               
chr15:20351801-20352103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
263, 15
               

               
Conread position:
               
63-372
               

               
Cow position:
               
chr15:16112370-16112677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
242, 13
               

               
Conread position:
               
63-372
               

               
Cow position:
               
chr15:21821954-21821648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
236, 17
               

               
Conread position:
               
64-252
               

               
Cow position:
               
chr15:22442307-22442117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
65-268
               

               
Cow position:
               
chr15:16908405-16908603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
66-370
               

               
Cow position:
               
chr15:16603796-16604097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 95
               

               
Conread position:
               
69-370
               

               
Cow position:
               
chr15:41000096-40999795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
165, 86
               

               
Conread position:
               
70-254
               

               
Cow position:
               
chr15:37284428-37284613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
138, 171
               

               
Conread position:
               
71-356
               

               
Cow position:
               
chr15:46868738-46868453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
71-372
               

               
Cow position:
               
chr15:1804362-1804056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
75-291
               

               
Cow position:
               
chr15:10660575-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
75-372
               

               
Cow position:
               
chr15:39082193-39082473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
144, 73
               

               
Conread position:
               
76-366
               

               
Cow position:
               
chr15:17870303-17870026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 25
               

               
Conread position:
               
76-372
               

               
Cow position:
               
chr15:41125592-41125295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
80-324
               

               
Cow position:
               
chr15:26117509-26117738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
83-372
               

               
Cow position:
               
chr15:5729929-5730209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
85-352
               

               
Cow position:
               
chr15:6905067-6905317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
85-353
               

               
Cow position:
               
chr15:26404273-26404531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
241, 66
               

               
Conread position:
               
85-360
               

               
Cow position:
               
chr15:29340051-29340327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
52, 175
               

               
Conread position:
               
88-372
               

               
Cow position:
               
chr15:4534904-4535179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
88-372
               

               
Cow position:
               
chr15:24128024-24128302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
89-372
               

               
Cow position:
               
chr15:4093939-4093652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 121
               

               
Conread position:
               
92-324
               

               
Cow position:
               
chr15:3726121-3726346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
98-372
               

               
Cow position:
               
chr15:18720317-18720586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
99-280
               

               
Cow position:
               
chr15:35425805-35425630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
99-366
               

               
Cow position:
               
chr15:14870747-14871012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
99-367
               

               
Cow position:
               
chr15:1830569-1830832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
99-371
               

               
Cow position:
               
chr15:10088323-10088585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
180, 117
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr15:4138140-4138409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
204, 36
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr15:15573831-15573548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
99-372
               

               
Cow position:
               
chr15:16639781-16640056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 146
               

               
Conread position:
               
100-372
               

               
Cow position:
               
chr15:1055862-1056131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
102-372
               

               
Cow position:
               
chr15:24305474-24305206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
110-357
               

               
Cow position:
               
chr15:363040-363285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
110-369
               

               
Cow position:
               
chr15:13515381-13515641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr15:5443999-5444255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr15:23798515-23798248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr15:31857606-31857864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
216, 100
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr15:33284892-33285154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
110-372
               

               
Cow position:
               
chr15:50322609-50322867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
218, 0
               

               
Conread position:
               
111-299
               

               
Cow position:
               
chr15:18647396-18647581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
111-370
               

               
Cow position:
               
chr15:13387093-13387353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
113, 51
               

               
Conread position:
               
111-372
               

               
Cow position:
               
chr15:35417609-35417349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
178, 105
               

               
Conread position:
               
113-372
               

               
Cow position:
               
chr15:24045083-24044826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr15:41360931-41360690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
119-345
               

               
Cow position:
               
chr15:47821840-47822056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
119-353
               

               
Cow position:
               
chr15:47280115-47279883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
181, 95
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr15:20472524-20472274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 145
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr15:6462473-6462230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
186, 83
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr15:9526454-9526196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
98, 91
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr15:15880950-15881207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 77
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr15:25585066-25584817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr15:31137442-31137189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
186, 93
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr15:43914071-43913812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
119-372
               

               
Cow position:
               
chr15:51427805-51427551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
120-372
               

               
Cow position:
               
chr15:21832411-21832152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
80, 215
               

               
Conread position:
               
120-372
               

               
Cow position:
               
chr15:21907960-21908209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
121-372
               

               
Cow position:
               
chr15:8610294-8610046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
121-372
               

               
Cow position:
               
chr15:11658547-11658293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
101, 74
               

               
Conread position:
               
124-372
               

               
Cow position:
               
chr15:7456726-7456969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
124-372
               

               
Cow position:
               
chr15:44051467-44051225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
131-372
               

               
Cow position:
               
chr15:38877268-38877031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 121
               

               
Conread position:
               
133-372
               

               
Cow position:
               
chr15:9871376-9871138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
134-372
               

               
Cow position:
               
chr15:40798388-40798153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
146-370
               

               
Cow position:
               
chr15:11646441-11646218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 194
               

               
Conread position:
               
147-372
               

               
Cow position:
               
chr15:34104309-34104538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 193
               

               
Conread position:
               
147-372
               

               
Cow position:
               
chr15:38103833-38103618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
179, 59
               

               
Conread position:
               
148-323
               

               
Cow position:
               
chr15:2380406-2380583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
151-323
               

               
Cow position:
               
chr15:1502958-1503131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 151
               

               
Conread position:
               
151-372
               

               
Cow position:
               
chr15:40009598-40009378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 176
               

               
Conread position:
               
161-372
               

               
Cow position:
               
chr15:23702845-23703045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr15:6586648-6586441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
168, 83
               

               
Conread position:
               
165-268
               

               
Cow position:
               
chr15:53081428-53081533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
170-372
               

               
Cow position:
               
chr15:5715626-5715824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
171-372
               

               
Cow position:
               
chr15:23487092-23486899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
172-345
               

               
Cow position:
               
chr15:15708037-15707862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
173-372
               

               
Cow position:
               
chr15:41582986-41583182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr15:21522869-21523062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 56
               

               
Conread position:
               
194-372
               

               
Cow position:
               
chr15:36422757-36422929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
138, 28
               

               
Conread position:
               
238-372
               

               
Cow position:
               
chr15:1128136-1128269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
264-368
               

               
Cow position:
               
chr15:24822211-24822107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 74
               
Show alignments to all cow chromosomes.