Cow genome map

Conread name: Ss1.1-rpigcf0_007044.5

Conread position: 1-197
Cow position: chr17:5743069-5743263 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 1-350
Cow position: chr17:33657842-33658190 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 14

Conread position: 1-372
Cow position: chr17:8079530-8079172 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 245
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 325, 53

Conread position: 1-372
Cow position: chr17:9117864-9117501 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 74

Conread position: 2-372
Cow position: chr17:29157637-29157276 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 206, 78

Conread position: 5-348
Cow position: chr17:23516726-23517063 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 7-260
Cow position: chr17:28814279-28814533 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 205, 20

Conread position: 7-372
Cow position: chr17:8544523-8544164 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 92

Conread position: 10-372
Cow position: chr17:5006264-5006629 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 245
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 162

Conread position: 10-372
Cow position: chr17:25796120-25796482 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 92

Conread position: 12-372
Cow position: chr17:1410025-1410385 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 77

Conread position: 13-372
Cow position: chr17:1060833-1061205 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 23

Conread position: 17-368
Cow position: chr17:17060475-17060822 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 204, 85

Conread position: 17-370
Cow position: chr17:24554203-24553864 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 52

Conread position: 21-196
Cow position: chr17:9713140-9713313 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 22-246
Cow position: chr17:22048584-22048811 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 22-273
Cow position: chr17:22016888-22017134 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 193, 53

Conread position: 22-324
Cow position: chr17:15340549-15340850 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 193

Conread position: 23-372
Cow position: chr17:32366479-32366142 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 27

Conread position: 23-372
Cow position: chr17:38833242-38832900 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 161, 6

Conread position: 25-372
Cow position: chr17:15102693-15103030 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 26-197
Cow position: chr17:37430306-37430477 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 26-311
Cow position: chr17:21757942-21758223 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 183, 0

Conread position: 27-324
Cow position: chr17:34751208-34751503 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 23

Conread position: 30-372
Cow position: chr17:15333509-15333853 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 11

Conread position: 30-372
Cow position: chr17:21680972-21680626 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 53

Conread position: 31-324
Cow position: chr17:7137179-7136884 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 175

Conread position: 31-347
Cow position: chr17:17410485-17410168 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 207
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 62

Conread position: 32-359
Cow position: chr17:32273496-32273818 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 156, 48

Conread position: 34-368
Cow position: chr17:1562596-1562912 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 24

Conread position: 34-372
Cow position: chr17:7760280-7760605 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 222
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 9

Conread position: 34-372
Cow position: chr17:22032505-22032836 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 36

Conread position: 34-372
Cow position: chr17:40331953-40331623 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 218, 42

Conread position: 35-365
Cow position: chr17:30728692-30728382 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 32

Conread position: 36-324
Cow position: chr17:5900556-5900269 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 189, 44

Conread position: 36-372
Cow position: chr17:20780704-20780368 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 181

Conread position: 37-372
Cow position: chr17:11280914-11281249 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 56

Conread position: 38-208
Cow position: chr17:29075898-29076066 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 38-372
Cow position: chr17:18592630-18592298 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 216

Conread position: 38-372
Cow position: chr17:26231139-26230797 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 223
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 42

Conread position: 40-372
Cow position: chr17:14033458-14033786 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 214
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 8, 46

Conread position: 41-200
Cow position: chr17:18109366-18109524 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 41-356
Cow position: chr17:22564366-22564051 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 39

Conread position: 42-365
Cow position: chr17:21738693-21739014 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 175, 56

Conread position: 42-366
Cow position: chr17:9854156-9853850 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 294, 35

Conread position: 42-371
Cow position: chr17:21292867-21293185 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 263, 33

Conread position: 42-372
Cow position: chr17:4121548-4121864 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 308, 33

Conread position: 42-372
Cow position: chr17:7810573-7810881 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 64, 35

Conread position: 43-351
Cow position: chr17:32138245-32138539 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 43-370
Cow position: chr17:28468301-28467996 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 20

Conread position: 43-372
Cow position: chr17:1634312-1634627 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 33

Conread position: 45-372
Cow position: chr17:10458752-10459078 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 126, 282

Conread position: 46-242
Cow position: chr17:3389002-3388808 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 166, 99

Conread position: 46-314
Cow position: chr17:25342566-25342828 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 30

Conread position: 46-324
Cow position: chr17:21325509-21325235 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 0

Conread position: 46-370
Cow position: chr17:13940144-13940462 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 258, 31

Conread position: 46-372
Cow position: chr17:7698226-7697911 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 32

Conread position: 46-372
Cow position: chr17:17222518-17222200 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 207
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 249, 28

Conread position: 46-372
Cow position: chr17:20032734-20033058 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 59, 29

Conread position: 46-372
Cow position: chr17:20090457-20090763 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 167

Conread position: 46-372
Cow position: chr17:21972953-21973275 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 204
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 178, 34

Conread position: 47-321
Cow position: chr17:27202866-27203139 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 175

Conread position: 48-372
Cow position: chr17:21414651-21414981 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 44

Conread position: 48-372
Cow position: chr17:21437134-21437464 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 44

Conread position: 50-226
Cow position: chr17:43315114-43315286 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 50-238
Cow position: chr17:37340857-37341053 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 27

Conread position: 50-253
Cow position: chr17:29995261-29995465 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 169, 0

Conread position: 50-254
Cow position: chr17:25511416-25511214 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 159, 27

Conread position: 50-273
Cow position: chr17:21039730-21039517 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 50-278
Cow position: chr17:22051417-22051644 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 148, 26

Conread position: 50-292
Cow position: chr17:24751085-24750851 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 26

Conread position: 50-305
Cow position: chr17:9824841-9824590 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 167, 25

Conread position: 50-319
Cow position: chr17:20157782-20157518 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 102

Conread position: 50-322
Cow position: chr17:13243876-13244136 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 29

Conread position: 50-341
Cow position: chr17:24004546-24004268 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 275, 54

Conread position: 50-345
Cow position: chr17:20071924-20072200 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 276, 135

Conread position: 50-345
Cow position: chr17:32989649-32989366 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 50-347
Cow position: chr17:20884696-20884402 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 287, 48

Conread position: 50-360
Cow position: chr17:20992870-20993174 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 57, 24

Conread position: 50-360
Cow position: chr17:32993451-32993749 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 50-364
Cow position: chr17:21114781-21115084 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 26

Conread position: 50-364
Cow position: chr17:32280842-32280531 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 63

Conread position: 50-365
Cow position: chr17:25097627-25097324 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 289, 42

Conread position: 50-369
Cow position: chr17:27058381-27058692 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 166

Conread position: 50-370
Cow position: chr17:24587797-24587478 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 26

Conread position: 50-372
Cow position: chr17:9697508-9697844 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 114, 8

Conread position: 50-372
Cow position: chr17:11664409-11664733 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 38

Conread position: 50-372
Cow position: chr17:23101046-23101353 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 33

Conread position: 50-372
Cow position: chr17:25118059-25117748 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 50

Conread position: 50-372
Cow position: chr17:25128180-25128492 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 50-372
Cow position: chr17:32027279-32027604 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 116, 49

Conread position: 50-372
Cow position: chr17:32278730-32279049 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 63

Conread position: 50-372
Cow position: chr17:32418943-32419260 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 26

Conread position: 51-211
Cow position: chr17:42150565-42150405 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 51-277
Cow position: chr17:12325593-12325816 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 204, 24

Conread position: 51-322
Cow position: chr17:35338745-35339011 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 24

Conread position: 51-345
Cow position: chr17:32349240-32348955 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 285, 24

Conread position: 51-372
Cow position: chr17:40741824-40741505 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 213
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 119, 24

Conread position: 53-372
Cow position: chr17:24786850-24787163 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 73

Conread position: 54-222
Cow position: chr17:40276909-40276744 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 54-245
Cow position: chr17:24163205-24163018 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 170, 22

Conread position: 54-249
Cow position: chr17:12959275-12959082 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 158, 22

Conread position: 54-255
Cow position: chr17:32332921-32333121 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 148, 21

Conread position: 54-269
Cow position: chr17:25800714-25800925 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 109, 21

Conread position: 54-270
Cow position: chr17:33154984-33155199 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 120, 0

Conread position: 54-289
Cow position: chr17:26575052-26575291 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 83, 162

Conread position: 54-294
Cow position: chr17:40639112-40638882 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 54-324
Cow position: chr17:11831944-11832217 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 155, 179

Conread position: 54-324
Cow position: chr17:11912333-11912595 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 21

Conread position: 54-324
Cow position: chr17:25616416-25616161 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 54-324
Cow position: chr17:40852141-40851885 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 22

Conread position: 54-348
Cow position: chr17:11215723-11216013 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 35

Conread position: 54-356
Cow position: chr17:28284864-28285156 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 161, 21

Conread position: 54-359
Cow position: chr17:6318698-6318990 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 171, 22

Conread position: 54-361
Cow position: chr17:18108918-18109222 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 21

Conread position: 54-365
Cow position: chr17:40772002-40771696 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 65

Conread position: 54-369
Cow position: chr17:25612259-25611954 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 156, 22

Conread position: 54-371
Cow position: chr17:9746684-9746377 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 93

Conread position: 54-372
Cow position: chr17:1035426-1035743 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 57

Conread position: 54-372
Cow position: chr17:4105823-4106128 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 296, 143

Conread position: 54-372
Cow position: chr17:4225334-4225633 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 0

Conread position: 54-372
Cow position: chr17:9911928-9911623 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 168, 91

Conread position: 54-372
Cow position: chr17:15684681-15684363 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 203
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 157

Conread position: 54-372
Cow position: chr17:18473335-18473034 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 23

Conread position: 54-372
Cow position: chr17:24822032-24821724 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 105, 116

Conread position: 54-372
Cow position: chr17:24824415-24824110 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 6

Conread position: 54-372
Cow position: chr17:24883402-24883710 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 306, 31

Conread position: 54-372
Cow position: chr17:30665440-30665130 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 170, 38

Conread position: 55-213
Cow position: chr17:17035117-17034961 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 55-252
Cow position: chr17:8815360-8815164 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 19

Conread position: 55-280
Cow position: chr17:5372359-5372583 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 113, 21

Conread position: 55-281
Cow position: chr17:8948795-8949024 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 21

Conread position: 55-291
Cow position: chr17:1025657-1025885 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 20

Conread position: 55-291
Cow position: chr17:34790896-34791131 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 21

Conread position: 55-324
Cow position: chr17:33933576-33933846 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 31

Conread position: 55-360
Cow position: chr17:12447226-12447534 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 94, 34

Conread position: 55-368
Cow position: chr17:26765191-26764875 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 19

Conread position: 55-371
Cow position: chr17:3467922-3467628 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 142, 0

Conread position: 55-372
Cow position: chr17:11277861-11278175 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 18

Conread position: 55-372
Cow position: chr17:17406303-17405996 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 21

Conread position: 55-372
Cow position: chr17:23246368-23246068 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 156, 96

Conread position: 56-248
Cow position: chr17:18847989-18848183 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 164, 0

Conread position: 56-278
Cow position: chr17:39606599-39606378 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 189

Conread position: 56-305
Cow position: chr17:33793330-33793085 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 172, 20

Conread position: 56-321
Cow position: chr17:265837-265581 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 163, 12

Conread position: 56-325
Cow position: chr17:18495353-18495619 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 137, 27

Conread position: 56-363
Cow position: chr17:6423928-6423624 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 21

Conread position: 56-370
Cow position: chr17:12946185-12946505 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 39

Conread position: 56-371
Cow position: chr17:27429732-27429437 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 168, 20

Conread position: 56-372
Cow position: chr17:5768073-5767772 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 56-372
Cow position: chr17:12219772-12220080 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 202
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 19

Conread position: 56-372
Cow position: chr17:13922656-13922333 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 52, 19

Conread position: 56-372
Cow position: chr17:31037210-31037522 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 12

Conread position: 56-372
Cow position: chr17:32471614-32471936 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 19

Conread position: 57-301
Cow position: chr17:12510815-12511050 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 225, 18

Conread position: 57-324
Cow position: chr17:29084343-29084092 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 150

Conread position: 57-345
Cow position: chr17:17059589-17059314 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 160, 18

Conread position: 57-357
Cow position: chr17:20022345-20022648 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 283

Conread position: 57-372
Cow position: chr17:908906-908604 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 57-372
Cow position: chr17:11618750-11618438 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 28

Conread position: 57-372
Cow position: chr17:16371423-16371109 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 242, 35

Conread position: 57-372
Cow position: chr17:21003662-21003973 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 53

Conread position: 57-372
Cow position: chr17:25901370-25901053 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 284

Conread position: 58-262
Cow position: chr17:17044168-17044369 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 58-325
Cow position: chr17:25513952-25514222 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 16, 141

Conread position: 58-372
Cow position: chr17:5422904-5423215 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 22

Conread position: 58-372
Cow position: chr17:36330794-36331109 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 220, 18

Conread position: 59-324
Cow position: chr17:14652615-14652878 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 30

Conread position: 59-362
Cow position: chr17:3577701-3577406 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 16

Conread position: 59-372
Cow position: chr17:40288837-40289145 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 241, 16

Conread position: 60-364
Cow position: chr17:33288494-33288792 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 15

Conread position: 60-371
Cow position: chr17:12536300-12536609 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 268

Conread position: 60-372
Cow position: chr17:6329278-6328966 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 239, 28

Conread position: 60-372
Cow position: chr17:25189448-25189137 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 202
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 152, 20

Conread position: 60-372
Cow position: chr17:30718255-30718561 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 202
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 240, 25

Conread position: 61-324
Cow position: chr17:35573914-35573665 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 61-372
Cow position: chr17:979007-979295 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 244, 15

Conread position: 62-351
Cow position: chr17:39736337-39736056 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 159, 105

Conread position: 62-372
Cow position: chr17:1063333-1063047 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 14

Conread position: 62-372
Cow position: chr17:20990029-20990336 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 11

Conread position: 63-304
Cow position: chr17:40406606-40406366 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 128

Conread position: 65-204
Cow position: chr17:11478928-11478790 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 65-293
Cow position: chr17:25032324-25032550 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 177, 15

Conread position: 65-372
Cow position: chr17:12591334-12591021 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 279

Conread position: 65-372
Cow position: chr17:21495529-21495232 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 11

Conread position: 67-359
Cow position: chr17:8690296-8690576 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 232, 8

Conread position: 69-370
Cow position: chr17:24580139-24580440 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 143, 56

Conread position: 69-372
Cow position: chr17:30713499-30713204 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 187, 37

Conread position: 71-368
Cow position: chr17:22806389-22806679 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 109

Conread position: 72-300
Cow position: chr17:36864783-36864557 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 140, 159

Conread position: 75-351
Cow position: chr17:30539120-30539376 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 257, 38

Conread position: 76-243
Cow position: chr17:9932151-9932319 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 134, 0

Conread position: 77-324
Cow position: chr17:1040892-1040648 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 77-372
Cow position: chr17:5000440-5000718 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 78-324
Cow position: chr17:25502257-25502012 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 75

Conread position: 85-298
Cow position: chr17:11368710-11368922 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 132, 40

Conread position: 88-372
Cow position: chr17:3503718-3503444 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 82, 0

Conread position: 89-324
Cow position: chr17:23563659-23563887 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 124

Conread position: 95-353
Cow position: chr17:4299801-4300045 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 15

Conread position: 95-372
Cow position: chr17:11101675-11101936 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 45

Conread position: 99-370
Cow position: chr17:4968238-4967970 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 227, 114

Conread position: 99-370
Cow position: chr17:41891935-41892208 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 137

Conread position: 99-372
Cow position: chr17:11156368-11156635 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 48

Conread position: 99-372
Cow position: chr17:29715079-29715328 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 37

Conread position: 100-372
Cow position: chr17:21243665-21243929 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 119, 46

Conread position: 104-372
Cow position: chr17:7132318-7132597 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 34, 238

Conread position: 108-347
Cow position: chr17:27183826-27184061 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 102, 51

Conread position: 110-299
Cow position: chr17:21478807-21478995 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 36

Conread position: 110-347
Cow position: chr17:30529430-30529662 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 190, 99

Conread position: 110-372
Cow position: chr17:14003940-14003675 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 222

Conread position: 111-357
Cow position: chr17:28540142-28539897 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 32

Conread position: 111-360
Cow position: chr17:11172501-11172750 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 129

Conread position: 111-370
Cow position: chr17:19891738-19891475 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 141

Conread position: 111-372
Cow position: chr17:3782157-3781903 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 33

Conread position: 111-372
Cow position: chr17:26818344-26818595 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 81

Conread position: 114-356
Cow position: chr17:8836837-8837079 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 108, 36

Conread position: 114-370
Cow position: chr17:31231012-31231255 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 212, 26

Conread position: 114-372
Cow position: chr17:1275634-1275378 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 30

Conread position: 114-372
Cow position: chr17:25541706-25541955 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 107, 154

Conread position: 114-372
Cow position: chr17:25917013-25916750 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 117

Conread position: 115-372
Cow position: chr17:38647171-38646922 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 144

Conread position: 116-372
Cow position: chr17:10020682-10020941 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 213

Conread position: 116-372
Cow position: chr17:40421780-40421526 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 129

Conread position: 117-324
Cow position: chr17:40250531-40250328 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 101, 8

Conread position: 119-249
Cow position: chr17:35140991-35141121 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 119-361
Cow position: chr17:27274672-27274427 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 107

Conread position: 119-371
Cow position: chr17:24928581-24928338 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 228, 93

Conread position: 119-372
Cow position: chr17:18860615-18860861 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 181, 202

Conread position: 119-372
Cow position: chr17:21335586-21335840 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 119

Conread position: 119-372
Cow position: chr17:21599577-21599827 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 179, 85

Conread position: 119-372
Cow position: chr17:21917767-21918016 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 67

Conread position: 119-372
Cow position: chr17:21959582-21959825 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 183, 98

Conread position: 119-372
Cow position: chr17:24490647-24490379 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 233

Conread position: 119-372
Cow position: chr17:24974047-24973809 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 0

Conread position: 119-372
Cow position: chr17:31701537-31701295 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 181, 81

Conread position: 120-372
Cow position: chr17:34596045-34595797 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 219, 91

Conread position: 124-364
Cow position: chr17:35126811-35126576 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 203

Conread position: 130-372
Cow position: chr17:4601450-4601690 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 88

Conread position: 130-372
Cow position: chr17:20870003-20870241 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 50

Conread position: 139-372
Cow position: chr17:12059007-12059233 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 29

Conread position: 147-286
Cow position: chr17:20269810-20269671 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 24

Conread position: 147-334
Cow position: chr17:32009362-32009546 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 72, 132

Conread position: 147-372
Cow position: chr17:41289944-41290163 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 179, 70

Conread position: 152-372
Cow position: chr17:3306931-3306725 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 174, 47

Conread position: 154-372
Cow position: chr17:10510586-10510804 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 172, 178

Conread position: 162-371
Cow position: chr17:1783541-1783750 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 73

Conread position: 164-372
Cow position: chr17:27306221-27306016 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 141, 153

Conread position: 164-372
Cow position: chr17:34207754-34207962 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 164

Conread position: 167-372
Cow position: chr17:15188017-15188223 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 155

Conread position: 170-372
Cow position: chr17:24761173-24761368 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 175-372
Cow position: chr17:32950325-32950130 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 20

Conread position: 185-372
Cow position: chr17:34834174-34834362 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 36

Conread position: 185-372
Cow position: chr17:42347184-42347363 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 56

Conread position: 194-372
Cow position: chr17:4436200-4436373 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 132, 122

Conread position: 194-372
Cow position: chr17:20835626-20835451 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 132, 36

Conread position: 206-372
Cow position: chr17:12216054-12216219 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 46, 11

Conread position: 206-372
Cow position: chr17:21207112-21207277 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 53

Conread position: 210-371
Cow position: chr17:22781707-22781546 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 7

Conread position: 218-372
Cow position: chr17:21697745-21697590 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 111

Conread position: 220-372
Cow position: chr17:21017803-21017652 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 119, 77

Conread position: 227-372
Cow position: chr17:27667188-27667336 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 113

Show alignments to all cow chromosomes.